RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 WDHD1O75717 1129 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 COL9A1P20849 921 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 PRDX5P30044 214 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 TIMM10P62072 90 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 TFCP2Q12800 502 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 NOM1Q5C9Z4 860 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 SPTY2D1Q68D10 685 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 APOBEC3HQ6NTF7 200 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 LAPTM4BQ86VI4 370 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 TMEM57Q8N5G2 664 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 FAM151AQ8WW52 585 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 OPTNQ96CV9 577 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 TEPSINQ96N21 525 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 CFHR5Q9BXR6 569 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 ABCF2Q9UG63 623 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 TNNQ9UQP3 1299 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 MYH2Q9UKX2 1941 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 CENPBP07199 599 aaPredicted RBP9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 ADORA1P30542 326 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 OS9Q13438 667 aaPredicted RBP9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 DIXDC1Q155Q3 683 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 ITPRIPQ8IWB1 547 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 XAGE2Q96GT9 111 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 WRNIP1Q96S55 665 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 DAGLAQ9Y4D2 1042 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 ZBED9Q6R2W3 1325 aa9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 RPAP1Q9BWH6 1393 aaPredicted RBP9.48□□□□□ -0.89
HNRNPC-226ENST00000556628 PNMA6EA0A0J9YXQ4 647 aa9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 GTF2A2P52657 109 aa9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 TCP10Q12799 353 aa9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 RASGRF1Q13972 1273 aa9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 VGLL4Q14135 290 aa9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 ERICH6Q7L0X2 663 aa9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.47□□□□□ -0.892e-14■□□□□ 9.1
HNRNPC-226ENST00000556628 ZNF341Q9BYN7 854 aa9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 PDS5AQ29RF7 1337 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-226ENST00000556628 CCL15-CCL14A0A0B4J2E2 113 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 IGF2BP3O00425 579 aaKnown RBP eCLIP9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 LDHCP07864 332 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 UQCRFS1P1P0C7P4 283 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 MS4A1P11836 297 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 GJA5P36382 358 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 GSTO1P78417 241 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 ATP8B2P98198 1209 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 MLLT1Q03111 559 aaPredicted RBP9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 CCL15Q16663 113 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 CDC42EP5Q6NZY7 148 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 ERO1BQ86YB8 467 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 ERO1AQ96HE7 468 aa9.46□□□□□ -0.9
HNRNPC-226ENST00000556628 DOCK2Q92608 1830 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 SURF6O75683 361 aaKnown RBP9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 CETPP11597 493 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 MLLT3P42568 568 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 SNAPC2Q13487 334 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 ARHGEF6Q15052 776 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 TAF1CQ15572 869 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 CCDC158Q5M9N0 1113 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 TTC39AQ5SRH9 613 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 FBXO46Q6PJ61 603 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 NYAP1Q6ZVC0 841 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 ZSCAN29Q8IWY8 852 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 SPATA5Q8NB90 893 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 ZKSCAN4Q969J2 545 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 NOL10Q9BSC4 688 aaKnown RBP9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 ZFYVE28Q9HCC9 887 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 GPR108Q9NPR9 543 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 HPS5Q9UPZ3 1129 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 SNCAIPQ9Y6H5 919 aa9.45□□□□□ -0.9
HNRNPC-226ENST00000556628 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 ENTPD3O75355 529 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 ARID4AP29374 1257 aaPredicted RBP9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 BTDP43251 543 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 RGS19P49795 217 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 SP3Q02447 781 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 PPATQ06203 517 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 NFIAQ12857 509 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 CRHR2Q13324 411 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 PPIL2Q13356 520 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 PICALMQ13492 652 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 MIGA2Q7L4E1 593 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 SSH3Q8TE77 659 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 EPAS1Q99814 870 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 IDI2Q9BXS1 227 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 R3HDMLQ9H3Y0 253 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 C1orf115Q9H7X2 142 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 RAI14Q9P0K7 980 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 HMG20BQ9P0W2 317 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 LRP2BPQ9P2M1 347 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 TRIM17Q9Y577 477 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 MROH7-TTC4A0A0A0MT08 1334 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 GAKO14976 1311 aa9.44□□□□□ -0.9
HNRNPC-226ENST00000556628 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 ZBTB7BO15156 539 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 MAP4K4O95819 1239 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms