RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 FAM110CQ1W6H9 321 aa12.06□□□□□ -0.48
CRX-203ENST00000556527 CCDC84Q86UT8 332 aaPredicted RBP12.06□□□□□ -0.48
CRX-203ENST00000556527 CCAR1Q8IX12 1150 aaKnown RBP12.06□□□□□ -0.48
CRX-203ENST00000556527 TEX11Q8IYF3 940 aa12.06□□□□□ -0.48
CRX-203ENST00000556527 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.06□□□□□ -0.48
CRX-203ENST00000556527 MYH2Q9UKX2 1941 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 UQCRFS1P1P0C7P4 283 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 HMGCS2P54868 508 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
CRX-203ENST00000556527 OS9Q13438 667 aaPredicted RBP12.05□□□□□ -0.48
CRX-203ENST00000556527 TREML2Q5T2D2 321 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 NECAB2Q7Z6G3 386 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 UBE2Q1Q7Z7E8 422 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 CRACR2BQ8N4Y2 399 aaPredicted RBP12.05□□□□□ -0.48
CRX-203ENST00000556527 ARHGAP45Q92619 1136 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 HMG20BQ9P0W2 317 aa12.05□□□□□ -0.48
CRX-203ENST00000556527 HERC5Q9UII4 1024 aaKnown RBP12.05□□□□□ -0.48
CRX-203ENST00000556527 DOCK1Q14185 1865 aa12.04□□□□□ -0.48
CRX-203ENST00000556527 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
CRX-203ENST00000556527 HMGCRP04035 888 aa12.04□□□□□ -0.48
CRX-203ENST00000556527 GNAI2P04899 355 aa12.04□□□□□ -0.48
CRX-203ENST00000556527 SLURP2P0DP57 97 aa12.04□□□□□ -0.48
CRX-203ENST00000556527 PLCG2P16885 1265 aa12.04□□□□□ -0.48
CRX-203ENST00000556527 CAP2P40123 477 aa12.04□□□□□ -0.48
CRX-203ENST00000556527 RHBDL3P58872 404 aa12.04□□□□□ -0.48
CRX-203ENST00000556527 FRAT1Q92837 279 aaPredicted RBP12.04□□□□□ -0.48
CRX-203ENST00000556527 NSUN4Q96CB9 384 aaKnown RBP12.04□□□□□ -0.48
CRX-203ENST00000556527 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.04□□□□□ -0.48
CRX-203ENST00000556527 DHX36Q9H2U1 1008 aaKnown RBP12.04□□□□□ -0.48
CRX-203ENST00000556527 CWC22Q9HCG8 908 aaKnown RBP12.04□□□□□ -0.48
CRX-203ENST00000556527 A0A1W2PPC1 479 aa12.03□□□□□ -0.48
CRX-203ENST00000556527 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
CRX-203ENST00000556527 MTX1Q13505 466 aa12.03□□□□□ -0.48
CRX-203ENST00000556527 CCDC158Q5M9N0 1113 aa12.03□□□□□ -0.48
CRX-203ENST00000556527 TTC39AQ5SRH9 613 aa12.03□□□□□ -0.48
CRX-203ENST00000556527 NAA16Q6N069 864 aaPredicted RBP12.03□□□□□ -0.48
CRX-203ENST00000556527 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
CRX-203ENST00000556527 TRMT2AQ8IZ69 625 aaKnown RBP12.03□□□□□ -0.48
CRX-203ENST00000556527 PAWRQ96IZ0 340 aaKnown RBP12.03□□□□□ -0.48
CRX-203ENST00000556527 ASCC2Q9H1I8 757 aaPredicted RBP12.03□□□□□ -0.48
CRX-203ENST00000556527 HMX1Q9NP08 348 aaPredicted RBP12.03□□□□□ -0.48
CRX-203ENST00000556527 PAK6Q9NQU5 681 aaPredicted RBP12.03□□□□□ -0.48
CRX-203ENST00000556527 PI4KBQ9UBF8 816 aa12.03□□□□□ -0.48
CRX-203ENST00000556527 TRIOBPQ9H2D6 2365 aa12.03□□□□□ -0.48
CRX-203ENST00000556527 COL2A1P02458 1487 aaPredicted RBP12.02□□□□□ -0.48
CRX-203ENST00000556527 ASNSP08243 561 aa12.02□□□□□ -0.49
CRX-203ENST00000556527 ARID4AP29374 1257 aaPredicted RBP12.02□□□□□ -0.49
CRX-203ENST00000556527 MTMR2Q13614 643 aa12.02□□□□□ -0.49
CRX-203ENST00000556527 PDE3AQ14432 1141 aa12.02□□□□□ -0.49
CRX-203ENST00000556527 ATF7IPQ6VMQ6 1270 aa12.02□□□□□ -0.49
CRX-203ENST00000556527 SH3RF3Q8TEJ3 882 aaPredicted RBP12.02□□□□□ -0.49
CRX-203ENST00000556527 AATFQ9NY61 560 aaKnown RBP eCLIP12.02□□□□□ -0.49
CRX-203ENST00000556527 MGAMO43451 1857 aa12.02□□□□□ -0.49
CRX-203ENST00000556527 HLA-DOAP06340 250 aa12.01□□□□□ -0.49
CRX-203ENST00000556527 MCAMP43121 646 aa12.01□□□□□ -0.49
CRX-203ENST00000556527 C7orf61Q8IZ16 206 aa12.01□□□□□ -0.49
CRX-203ENST00000556527 ANKLE1Q8NAG6 615 aa12.01□□□□□ -0.49
CRX-203ENST00000556527 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
CRX-203ENST00000556527 RPTORQ8N122 1335 aa12.01□□□□□ -0.49
CRX-203ENST00000556527 BACE1P56817 501 aa12□□□□□ -0.49
CRX-203ENST00000556527 SH3D19Q5HYK7 790 aa12□□□□□ -0.49
CRX-203ENST00000556527 MAPKAPK5Q8IW41 473 aa12□□□□□ -0.49
CRX-203ENST00000556527 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
CRX-203ENST00000556527 GPRC5AQ8NFJ5 357 aa12□□□□□ -0.49
CRX-203ENST00000556527 ZNF384Q8TF68 577 aa12□□□□□ -0.49
CRX-203ENST00000556527 TGFBRAP1Q8WUH2 860 aa12□□□□□ -0.49
CRX-203ENST00000556527 SOCS4Q8WXH5 440 aa12□□□□□ -0.49
CRX-203ENST00000556527 CLUAP1Q96AJ1 413 aa12□□□□□ -0.49
CRX-203ENST00000556527 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
CRX-203ENST00000556527 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
CRX-203ENST00000556527 SNRKQ9NRH2 765 aa12□□□□□ -0.49
CRX-203ENST00000556527 STAP2Q9UGK3 403 aa12□□□□□ -0.49
CRX-203ENST00000556527 C19orf81C9J6K1 198 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 USP17L10C9JJH3 530 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 TRIM27P14373 513 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 CYP2B6P20813 491 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 MAPK4P31152 587 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
CRX-203ENST00000556527 SLC17A8Q8NDX2 589 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 DIS3LQ8TF46 1054 aaKnown RBP11.99□□□□□ -0.49
CRX-203ENST00000556527 FEZ1Q99689 392 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 C11orf49Q9H6J7 331 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 MORF4L1Q9UBU8 362 aa11.99□□□□□ -0.49
CRX-203ENST00000556527 FLT1P17948 1338 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 PNMA6EA0A0J9YXQ4 647 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 GDF11O95390 407 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
CRX-203ENST00000556527 ZKSCAN1P17029 563 aaPredicted RBP11.98□□□□□ -0.49
CRX-203ENST00000556527 HERVK_113P62684 666 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 TNNI3KQ59H18 835 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 GTF3C2Q8WUA4 911 aaPredicted RBP11.98□□□□□ -0.49
CRX-203ENST00000556527 PAGR1Q9BTK6 254 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 PRO3102Q9H379 93 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 SAP30BPQ9UHR5 308 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms