RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 PCDHB10Q9UN67 800 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 PRKAB1Q9Y478 270 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 SLC12A7Q9Y666 1083 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 TACC3Q9Y6A5 838 aa5.81□□□□□ -1.48
SPTLC2-204ENST00000556264 PRAMEF27A3QJZ7 478 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 FAM86C2PA6NEL3 165 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 UPK3BL1B0FP48 263 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 UPK3BL2E5RIL1 263 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 M0R082 166 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 DDX3YO15523 660 aaKnown RBP5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 RAB11FIP3O75154 756 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 GRK4P32298 578 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 NLRP12P59046 1061 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 HNRNPUQ00839 825 aaKnown RBP eCLIP5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 SUZ12Q15022 739 aaKnown RBP5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 KIF4BQ2VIQ3 1234 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 ARSHQ5FYA8 562 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 RNFT1Q5M7Z0 435 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 MSL1Q68DK7 614 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 VHLLQ6RSH7 139 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 EEPD1Q7L9B9 569 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 NLRC3Q7RTR2 1065 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 KLHL23Q8NBE8 558 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 ST13P5Q8NFI4 369 aaPredicted RBP5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 ZNF417Q8TAU3 575 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 ZNF587Q96SQ5 575 aaPredicted RBP5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 SLC9A7Q96T83 725 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 IRX2Q9BZI1 471 aaPredicted RBP5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 CNNM2Q9H8M5 875 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 PCDH12Q9NPG4 1184 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 NXF1Q9UBU9 619 aaKnown RBP5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 KLHL3Q9UH77 587 aa5.8□□□□□ -1.48
SPTLC2-204ENST00000556264 LOC100289279A0A1B0GTE1 492 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 CHURC1-FNTBB4DL54 471 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 PGRP06401 933 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 SLFN14P0C7P3 912 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 NCAPHQ15003 741 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 SETDB1Q15047 1291 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 TKFCQ3LXA3 575 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 ZC3H12AQ5D1E8 599 aaKnown RBP5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 TMEM201Q5SNT2 666 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 CDCP2Q5VXM1 449 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 C1orf229Q6ZS94 237 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 DMRTC2Q8IXT2 367 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 JMYQ8N9B5 988 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 GALNT11Q8NCW6 608 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 COL25A1Q9BXS0 654 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 PTCH2Q9Y6C5 1203 aa5.79□□□□□ -1.48
SPTLC2-204ENST00000556264 TNFRSF10CO14798 259 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 AOC2O75106 756 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 ASMTLO95671 621 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 DLGAP3O95886 979 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 ETF1P62495 437 aaKnown RBP5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 KIAA1211LQ6NV74 962 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 ACDQ96AP0 544 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 ZNF669Q96BR6 464 aaPredicted RBP5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 FEZ1Q99689 392 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 WDR18Q9BV38 432 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 PHAXQ9H814 394 aaKnown RBP5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 PICK1Q9NRD5 415 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 RAD18Q9NS91 495 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 ADAM30Q9UKF2 790 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 HIF3AQ9Y2N7 669 aa5.78□□□□□ -1.48
SPTLC2-204ENST00000556264 TM4SF5O14894 197 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 ADAM11O75078 769 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 FAM153BP0C7A2 387 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 RAG1P15918 1043 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 MASP1P48740 699 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 SLC7A5Q01650 507 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 RING1Q06587 406 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 TCEA2Q15560 299 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 GNPTABQ3T906 1256 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 TAF7LQ5H9L4 462 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 PPM1JQ5JR12 505 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 HP1BP3Q5SSJ5 553 aaPredicted RBP5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 CHSY3Q70JA7 882 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 GALNT6Q8NCL4 622 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 EDARADDQ8WWZ3 215 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 ACSF2Q96CM8 615 aaPredicted RBP5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 BTBD6Q96KE9 485 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 SPATA9Q9BWV2 254 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 WNT10AQ9GZT5 417 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 TMX1Q9H3N1 280 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 KCNK4Q9NYG8 393 aa5.77□□□□□ -1.49
SPTLC2-204ENST00000556264 H3BM21 787 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 SUSD5O60279 629 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 POLR2BP30876 1174 aaKnown RBP5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 CD68P34810 354 aaPredicted RBP5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 SRSF11Q05519 484 aaKnown RBP5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 Q6ZNB5 142 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 FAM13CQ8NE31 585 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 ZSWIM2Q8NEG5 633 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 KLHL6Q8WZ60 621 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 CWC22Q9HCG8 908 aaKnown RBP5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 TJP2Q9UDY2 1190 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 ZNF214Q9UL59 606 aaPredicted RBP5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 PCDHGC5Q9Y5F6 944 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 CD2APQ9Y5K6 639 aa5.76□□□□□ -1.49
SPTLC2-204ENST00000556264 LCE2BO14633 110 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms