RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CRNKL1Q9BZJ0 848 aaKnown RBP18.35■□□□□ 0.53
ACTN1-217ENST00000556203 ARMT1Q9H993 441 aa18.35■□□□□ 0.53
ACTN1-217ENST00000556203 PICK1Q9NRD5 415 aa18.35■□□□□ 0.53
ACTN1-217ENST00000556203 AK9Q5TCS8 1911 aa18.34■□□□□ 0.53
ACTN1-217ENST00000556203 TESPA1A2RU30 521 aaPredicted RBP18.34■□□□□ 0.53
ACTN1-217ENST00000556203 IGF2BP3O00425 579 aaKnown RBP eCLIP18.34■□□□□ 0.53
ACTN1-217ENST00000556203 CTNND1O60716 968 aaKnown RBP18.34■□□□□ 0.53
ACTN1-217ENST00000556203 MBD4O95243 580 aa18.34■□□□□ 0.53
ACTN1-217ENST00000556203 HLA-DOAP06340 250 aa18.34■□□□□ 0.53
ACTN1-217ENST00000556203 HERC5Q9UII4 1024 aaKnown RBP18.34■□□□□ 0.53
ACTN1-217ENST00000556203 CCL15-CCL14A0A0B4J2E2 113 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 TBC1D8O95759 1140 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 ALDH1A1P00352 501 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 NUCB1Q02818 461 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 SNAPC2Q13487 334 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 CCL15Q16663 113 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 CHD1LQ86WJ1 897 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 FOXP4Q8IVH2 680 aaPredicted RBP18.33■□□□□ 0.52
ACTN1-217ENST00000556203 CRACR2BQ8N4Y2 399 aaPredicted RBP18.33■□□□□ 0.52
ACTN1-217ENST00000556203 SDR42E1Q8WUS8 393 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 BRI3BPQ8WY22 251 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 PTPN18Q99952 460 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 TRIM34Q9BYJ4 488 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 STAP2Q9UGK3 403 aa18.33■□□□□ 0.52
ACTN1-217ENST00000556203 CETPP11597 493 aa18.32■□□□□ 0.52
ACTN1-217ENST00000556203 PTPRAP18433 802 aa18.32■□□□□ 0.52
ACTN1-217ENST00000556203 PDE1AP54750 535 aa18.32■□□□□ 0.52
ACTN1-217ENST00000556203 OTUD7BQ6GQQ9 843 aa18.32■□□□□ 0.52
ACTN1-217ENST00000556203 PUS7LQ9H0K6 701 aaKnown RBP18.32■□□□□ 0.52
ACTN1-217ENST00000556203 DNAJC18Q9H819 358 aa18.32■□□□□ 0.52
ACTN1-217ENST00000556203 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.32■□□□□ 0.52
ACTN1-217ENST00000556203 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
ACTN1-217ENST00000556203 PRKAB2O43741 272 aa18.31■□□□□ 0.52
ACTN1-217ENST00000556203 RRP1BQ14684 758 aaKnown RBP18.31■□□□□ 0.52
ACTN1-217ENST00000556203 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
ACTN1-217ENST00000556203 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
ACTN1-217ENST00000556203 FSD1Q9BTV5 496 aa18.31■□□□□ 0.52
ACTN1-217ENST00000556203 DCP1AQ9NPI6 582 aaPredicted RBP18.31■□□□□ 0.52
ACTN1-217ENST00000556203 KCNH4Q9UQ05 1017 aa18.31■□□□□ 0.52
ACTN1-217ENST00000556203 ZHX2Q9Y6X8 837 aa18.31■□□□□ 0.52
ACTN1-217ENST00000556203 POLR3DP05423 398 aaPredicted RBP18.3■□□□□ 0.52
ACTN1-217ENST00000556203 ZFYP08048 801 aaPredicted RBP18.3■□□□□ 0.52
ACTN1-217ENST00000556203 CAP2P40123 477 aa18.3■□□□□ 0.52
ACTN1-217ENST00000556203 LRRFIP1Q32MZ4 808 aaKnown RBP18.3■□□□□ 0.52
ACTN1-217ENST00000556203 APPBP2Q92624 585 aa18.3■□□□□ 0.52
ACTN1-217ENST00000556203 MCM9Q9NXL9 1143 aa18.3■□□□□ 0.52
ACTN1-217ENST00000556203 PLCD1P51178 756 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 CCDC84Q86UT8 332 aaPredicted RBP18.29■□□□□ 0.52
ACTN1-217ENST00000556203 TNS4Q8IZW8 715 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 FAM43AQ8N2R8 423 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 OSBP2Q969R2 916 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 CFHR5Q9BXR6 569 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 EHD4Q9H223 541 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 R3HDMLQ9H3Y0 253 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 SERPINB13Q9UIV8 391 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 SLC4A4Q9Y6R1 1079 aa18.29■□□□□ 0.52
ACTN1-217ENST00000556203 FOCADQ5VW36 1801 aa18.28■□□□□ 0.52
ACTN1-217ENST00000556203 BTBD19C9JJ37 291 aa18.28■□□□□ 0.52
ACTN1-217ENST00000556203 CXCL11O14625 94 aa18.28■□□□□ 0.52
ACTN1-217ENST00000556203 ATP8A2Q9NTI2 1148 aa18.28■□□□□ 0.52
ACTN1-217ENST00000556203 AFG3L2Q9Y4W6 797 aa18.28■□□□□ 0.52
ACTN1-217ENST00000556203 CDK5RAP2Q96SN8 1893 aa18.27■□□□□ 0.52
ACTN1-217ENST00000556203 GPR25O00155 361 aa18.27■□□□□ 0.52
ACTN1-217ENST00000556203 GDF11O95390 407 aa18.27■□□□□ 0.52
ACTN1-217ENST00000556203 CYP2D6P10635 497 aa18.27■□□□□ 0.52
ACTN1-217ENST00000556203 CRHR2Q13324 411 aa18.27■□□□□ 0.52
ACTN1-217ENST00000556203 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.52
ACTN1-217ENST00000556203 EVI5LQ96CN4 794 aa18.27■□□□□ 0.52
ACTN1-217ENST00000556203 STRBPQ96SI9 672 aaKnown RBP18.27■□□□□ 0.52
ACTN1-217ENST00000556203 SIPA1L1O43166 1804 aa18.26■□□□□ 0.51
ACTN1-217ENST00000556203 TRIM75PA6NK02 468 aa18.26■□□□□ 0.51
ACTN1-217ENST00000556203 M0R2C6 588 aa18.26■□□□□ 0.51
ACTN1-217ENST00000556203 EVX2Q03828 476 aa18.26■□□□□ 0.51
ACTN1-217ENST00000556203 TAF1CQ15572 869 aaPredicted RBP18.26■□□□□ 0.51
ACTN1-217ENST00000556203 SHROOM1Q2M3G4 852 aaPredicted RBP18.26■□□□□ 0.51
ACTN1-217ENST00000556203 ZNF296Q8WUU4 475 aaPredicted RBP18.26■□□□□ 0.51
ACTN1-217ENST00000556203 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
ACTN1-217ENST00000556203 LAMB1P07942 1786 aa18.25■□□□□ 0.51
ACTN1-217ENST00000556203 A0A0G2JLL6 359 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-217ENST00000556203 USP17L5A8MUK1 530 aa18.25■□□□□ 0.51
ACTN1-217ENST00000556203 GPAA1O43292 621 aa18.25■□□□□ 0.51
ACTN1-217ENST00000556203 ASNSP08243 561 aa18.25■□□□□ 0.51
ACTN1-217ENST00000556203 JAG1P78504 1218 aa18.25■□□□□ 0.51
ACTN1-217ENST00000556203 MOGSQ13724 837 aa18.25■□□□□ 0.51
ACTN1-217ENST00000556203 NOM1Q5C9Z4 860 aaKnown RBP18.25■□□□□ 0.51
ACTN1-217ENST00000556203 TATDN1Q6P1N9 297 aa18.25■□□□□ 0.51
ACTN1-217ENST00000556203 PRRT2Q7Z6L0 340 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-217ENST00000556203 SHMT1P34896 483 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 GABPAQ06546 454 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 SPP2Q13103 211 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 ZMYM1Q5SVZ6 1142 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 FASTKD5Q7L8L6 764 aaKnown RBP18.24■□□□□ 0.51
ACTN1-217ENST00000556203 ANKRD23Q86SG2 305 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 AMOTL1Q8IY63 956 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 ZNF280CQ8ND82 737 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
ACTN1-217ENST00000556203 TBC1D2Q9BYX2 928 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 OSBPL3Q9H4L5 887 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 ZFYVE28Q9HCC9 887 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 ZCCHC17Q9NP64 241 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms