RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 U3KQE9 123 aa5.36□□□□□ -1.55
EFCAB11-210ENST00000556078 XIRP1Q702N8 1843 aaKnown RBP5.36□□□□□ -1.55
EFCAB11-210ENST00000556078 METTL12A8MUP2 240 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 AOC2O75106 756 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 TNFRSF21O75509 655 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 KRT1P04264 644 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 CEACAM5P06731 702 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 C1QTNF9P0C862 333 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 OXCT1P55809 520 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 C8orf34Q49A92 452 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 SNX29Q8TEQ0 813 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 STK32AQ8WU08 396 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 LIN37Q96GY3 246 aaPredicted RBP5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 CORO1BQ9BR76 489 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 TRIM56Q9BRZ2 755 aaKnown RBP5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 LGR6Q9HBX8 967 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 TIMELESSQ9UNS1 1208 aa5.35□□□□□ -1.55
EFCAB11-210ENST00000556078 ZFYVE16Q7Z3T8 1539 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 NFIBO00712 420 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 HOXA5P20719 270 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 CDK5R2Q13319 367 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 ERICH6Q7L0X2 663 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 DDX54Q8TDD1 881 aaKnown RBP5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 C20orf173Q96LM9 149 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 WDR18Q9BV38 432 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 TNKS2Q9H2K2 1166 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 PPP1R9AQ9ULJ8 1098 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 PLAGL2Q9UPG8 496 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 CTNND2Q9UQB3 1225 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 SNX11Q9Y5W9 270 aa5.34□□□□□ -1.55
EFCAB11-210ENST00000556078 ZNF142P52746 1687 aaPredicted RBP5.34□□□□□ -1.56
EFCAB11-210ENST00000556078 HECW1Q76N89 1606 aa5.34□□□□□ -1.56
EFCAB11-210ENST00000556078 ZMYM4Q5VZL5 1548 aa5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 WRNQ14191 1432 aaPredicted RBP eCLIP5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 A0A096LPE4 126 aa5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 A0A1W2PPZ6 126 aa5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 TOM1O60784 492 aa5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 CCNJLQ8IV13 435 aa5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 CLP1Q92989 425 aaKnown RBP5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 LATS2Q9NRM7 1088 aa5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 IQGAP2Q13576 1575 aa5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 LRRC7Q96NW7 1537 aa5.33□□□□□ -1.56
EFCAB11-210ENST00000556078 POGZQ7Z3K3 1410 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 POLR1AO95602 1720 aaPredicted RBP5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 NPIPB6E9PJ23 425 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 ECEL1O95672 775 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 GLI1P08151 1106 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 AFMP43652 599 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 NOM1Q5C9Z4 860 aaKnown RBP5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 HELQQ8TDG4 1101 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 SEPT3Q9UH03 358 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 AMOTL2Q9Y2J4 779 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 NEO1Q92859 1461 aa5.32□□□□□ -1.56
EFCAB11-210ENST00000556078 RAPGEF6Q8TEU7 1601 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 ABCA8O94911 1581 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 VWDEQ8N2E2 1590 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 NEURL4Q96JN8 1562 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 TMPRSS2O15393 492 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 B3GALT4O96024 378 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 KRTAP1-1Q07627 177 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 EHHADHQ08426 723 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 PRR23BQ6ZRT6 265 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 ARHGAP27Q6ZUM4 889 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 ASB11Q8WXH4 323 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 DUSP23Q9BVJ7 150 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 ATXN3LQ9H3M9 355 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 PRDM7Q9NQW5 492 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 TCOF1Q13428 1488 aaKnown RBP5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 AKNAQ7Z591 1439 aa5.31□□□□□ -1.56
EFCAB11-210ENST00000556078 LRP5O75197 1615 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 MYO3AQ8NEV4 1616 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 EFCAB5A4FU69 1503 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 LEFTY1O75610 366 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 EIF1AXP47813 144 aaKnown RBP5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 FYB2Q5VWT5 728 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 C14orf37Q86TY3 774 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 SMYD4Q8IYR2 804 aaPredicted RBP5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 FANCD2OSQ96PS1 177 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 PIDD1Q9HB75 910 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 FOXD3Q9UJU5 478 aaPredicted RBP5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 FHOD3Q2V2M9 1422 aa5.3□□□□□ -1.56
EFCAB11-210ENST00000556078 CPS1P31327 1500 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 SHANK2Q9UPX8 1470 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 GRIA4P48058 902 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 ZP2Q05996 745 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 PDE3AQ14432 1141 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 SPRED3Q2MJR0 410 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 TMEM164Q5U3C3 297 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 MPZL3Q6UWV2 235 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 FBXO15Q8NCQ5 510 aaPredicted RBP5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 TCF12Q99081 682 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 ZFYVE28Q9HCC9 887 aa5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 RNF17Q9BXT8 1623 aaKnown RBP5.29□□□□□ -1.56
EFCAB11-210ENST00000556078 DENND4BO75064 1496 aaPredicted RBP5.28□□□□□ -1.56
EFCAB11-210ENST00000556078 RAPGEF2Q9Y4G8 1499 aa5.28□□□□□ -1.56
EFCAB11-210ENST00000556078 ARID3CA6NKF2 412 aa5.28□□□□□ -1.56
EFCAB11-210ENST00000556078 FOXD2O60548 495 aaPredicted RBP5.28□□□□□ -1.56
EFCAB11-210ENST00000556078 ATG7O95352 703 aa5.28□□□□□ -1.56
EFCAB11-210ENST00000556078 USP5P45974 858 aa5.28□□□□□ -1.56
EFCAB11-210ENST00000556078 SRPK2P78362 688 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms