RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 AGTPBP1Q9UPW5 1226 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 TNNQ9UQP3 1299 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 CENPFP49454 3210 aa9.54□□□□□ -0.88
PTCSC3-201ENST00000556013 USP17L5A8MUK1 530 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 C19orf81C9J6K1 198 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 CYP2E1P05181 493 aaPredicted RBP9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 GJB1P08034 283 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 ASNSP08243 561 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 CTGFP29279 349 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 GRK4P32298 578 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 GCLCP48506 637 aaPredicted RBP9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 UBXN2AP68543 259 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 OS9Q13438 667 aaPredicted RBP9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 DIEXFQ68CQ4 756 aaKnown RBP9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 RPAP2Q8IXW5 612 aaPredicted RBP9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 TEX11Q8IYF3 940 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 SLAIN1Q8ND83 568 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 DBNDD2Q9BQY9 259 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 WDR18Q9BV38 432 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 ZBED9Q6R2W3 1325 aa9.53□□□□□ -0.88
PTCSC3-201ENST00000556013 MKI67P46013 3256 aaKnown RBP9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 CYP2C8P10632 490 aa9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 HOXA7P31268 230 aaPredicted RBP9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 GJA8P48165 433 aa9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 SPP2Q13103 211 aa9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 FAM110CQ1W6H9 321 aa9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 PI16Q6UXB8 463 aa9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 ITPRIPQ8IWB1 547 aa9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 MIER1Q8N108 512 aa9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 EAF2Q96CJ1 260 aaPredicted RBP9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 MYPNQ86TC9 1320 aa9.52□□□□□ -0.89
PTCSC3-201ENST00000556013 BRCA2P51587 3418 aa9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 GADL1Q6ZQY3 521 aa9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 SMCR8Q8TEV9 937 aaPredicted RBP9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 SH3TC2Q8TF17 1288 aa9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 COA7Q96BR5 231 aa9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 AATFQ9NY61 560 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 DBNLQ9UJU6 430 aaKnown RBP9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 TAOK2Q9UL54 1235 aa9.51□□□□□ -0.89
PTCSC3-201ENST00000556013 RBBP6Q7Z6E9 1792 aaKnown RBP9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 TRIM75PA6NK02 468 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 HLA-DOAP06340 250 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 RLBP1P12271 317 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 ZAP70P43403 619 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 FLT3LGP49771 235 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 BACE1P56817 501 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 PRKCZQ05513 592 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 MAP3K12Q12852 859 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 TTF1Q15361 905 aaPredicted RBP9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 SH3RF3Q8TEJ3 882 aaPredicted RBP9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 GTF3C2Q8WUA4 911 aaPredicted RBP9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 TGFBRAP1Q8WUH2 860 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 CCDC8Q9H0W5 538 aaPredicted RBP9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 SNRKQ9NRH2 765 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 DDX19BQ9UMR2 479 aa9.5□□□□□ -0.89
PTCSC3-201ENST00000556013 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 TNPO2O14787 897 aaKnown RBP9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 ADCY3O60266 1144 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 RAB11FIP3O75154 756 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 HMMRO75330 724 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 SGPL1O95470 568 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 CYP7A1P22680 504 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 RRP1BQ14684 758 aaKnown RBP9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 MTFR1Q15390 333 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 TATDN1Q6P1N9 297 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 TTC6Q86TZ1 520 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 CLASRPQ8N2M8 674 aaKnown RBP9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 KIF1BPQ96EK5 621 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 RNF208Q9H0X6 261 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 EHD4Q9H223 541 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 TMOD4Q9NZQ9 345 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 MORF4L1Q9UBU8 362 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 FLT1P17948 1338 aa9.49□□□□□ -0.89
PTCSC3-201ENST00000556013 SLURP2P0DP57 97 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 CCL5P13501 91 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 HMGCS2P54868 508 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 HABP4Q5JVS0 413 aaKnown RBP9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 TREML2Q5T2D2 321 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 UBE2Q1Q7Z7E8 422 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 ADGRA1Q86SQ6 560 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 MAPKAPK5Q8IW41 473 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 CRACR2BQ8N4Y2 399 aaPredicted RBP9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 ANKRD13CQ8N6S4 541 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 RHPN1Q8TCX5 695 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 HTATIP2Q9BUP3 242 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 TRIM34Q9BYJ4 488 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 ASCC2Q9H1I8 757 aaPredicted RBP9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 C1orf115Q9H7X2 142 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 PIH1D3Q9NQM4 214 aaKnown RBP9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 BIN2Q9UBW5 565 aaPredicted RBP9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 GJD2Q9UKL4 321 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 PALD1Q9ULE6 856 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 GABRQQ9UN88 632 aa9.48□□□□□ -0.89
PTCSC3-201ENST00000556013 DOCK2Q92608 1830 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 IDH1O75874 414 aaKnown RBP9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 XRCC5P13010 732 aaKnown RBP9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 USP14P54578 494 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms