RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 CSADQ9Y600 493 aa10.59□□□□□ -0.71
PSEN1-215ENST00000556011 ZNF521Q96K83 1311 aa10.58□□□□□ -0.71
PSEN1-215ENST00000556011 SETD2Q9BYW2 2564 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-215ENST00000556011 RPAP1Q9BWH6 1393 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-215ENST00000556011 EIF4E1BA6NMX2 242 aaKnown RBP10.58□□□□□ -0.72
PSEN1-215ENST00000556011 DNM1LO00429 736 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 LPXNO60711 386 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 ACRP10323 421 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 UNQ6494/PRO21346Q6UXR6 183 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 TMEM105Q8N8V8 129 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-215ENST00000556011 NEK9Q8TD19 979 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 RUBCNQ92622 972 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 ZBED3Q96IU2 234 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-215ENST00000556011 EYA3Q99504 573 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 GJD2Q9UKL4 321 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 ECM29Q5VYK3 1845 aa10.58□□□□□ -0.72
PSEN1-215ENST00000556011 PMLP29590 882 aa10.57□□□□□ -0.72
PSEN1-215ENST00000556011 CCR10P46092 362 aa10.57□□□□□ -0.72
PSEN1-215ENST00000556011 SHC2P98077 582 aa10.57□□□□□ -0.72
PSEN1-215ENST00000556011 ERO1BQ86YB8 467 aa10.57□□□□□ -0.72
PSEN1-215ENST00000556011 CYP2W1Q8TAV3 490 aa10.57□□□□□ -0.72
PSEN1-215ENST00000556011 NLRP3Q96P20 1036 aa10.57□□□□□ -0.72
PSEN1-215ENST00000556011 ZC3H12CQ9C0D7 883 aaKnown RBP10.57□□□□□ -0.72
PSEN1-215ENST00000556011 PCDHGC5Q9Y5F6 944 aa10.57□□□□□ -0.72
PSEN1-215ENST00000556011 EMILIN1Q9Y6C2 1016 aa10.57□□□□□ -0.72
PSEN1-215ENST00000556011 USP17L3A6NCW0 530 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 USP17L4A6NCW7 530 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 NTRK1P04629 796 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 GPSM2P81274 684 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 GJC2Q5T442 439 aaPredicted RBP10.56□□□□□ -0.72
PSEN1-215ENST00000556011 USP17L1Q7RTZ2 530 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.56□□□□□ -0.72
PSEN1-215ENST00000556011 LGR6Q9HBX8 967 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 PCDHA11Q9Y5I1 949 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 SNCAIPQ9Y6H5 919 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 ZNF804BA4D1E1 1349 aa10.56□□□□□ -0.72
PSEN1-215ENST00000556011 PLA2G2AP14555 144 aa10.55□□□□□ -0.72
PSEN1-215ENST00000556011 PPIL2Q13356 520 aa10.55□□□□□ -0.72
PSEN1-215ENST00000556011 MOGSQ13724 837 aa10.55□□□□□ -0.72
PSEN1-215ENST00000556011 ZNF513Q8N8E2 541 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-215ENST00000556011 TMEM39AQ9NV64 488 aa10.55□□□□□ -0.72
PSEN1-215ENST00000556011 TERF2IPQ9NYB0 399 aa10.55□□□□□ -0.72
PSEN1-215ENST00000556011 FAM50BQ9Y247 325 aa10.55□□□□□ -0.72
PSEN1-215ENST00000556011 CELSR3Q9NYQ7 3312 aa10.55□□□□□ -0.72
PSEN1-215ENST00000556011 MYBBP1AQ9BQG0 1328 aaKnown RBP10.55□□□□□ -0.72
PSEN1-215ENST00000556011 ZFHX3Q15911 3703 aa10.55□□□□□ -0.72
PSEN1-215ENST00000556011 NUP98P52948 1817 aa10.54□□□□□ -0.72
PSEN1-215ENST00000556011 CA3P07451 260 aa10.54□□□□□ -0.72
PSEN1-215ENST00000556011 CCDC174Q6PII3 467 aa10.54□□□□□ -0.72
PSEN1-215ENST00000556011 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
PSEN1-215ENST00000556011 TBC1D16Q8TBP0 767 aa10.54□□□□□ -0.72
PSEN1-215ENST00000556011 STAC3Q96MF2 364 aa10.54□□□□□ -0.72
PSEN1-215ENST00000556011 TEX13AQ9BXU3 409 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-215ENST00000556011 SEMA4AQ9H3S1 761 aa10.54□□□□□ -0.72
PSEN1-215ENST00000556011 ANKRD36CQ5JPF3 1778 aa10.54□□□□□ -0.72
PSEN1-215ENST00000556011 PPM1GO15355 546 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-215ENST00000556011 CYP2B6P20813 491 aa10.53□□□□□ -0.72
PSEN1-215ENST00000556011 PPIGQ13427 754 aaKnown RBP eCLIP10.53□□□□□ -0.72
PSEN1-215ENST00000556011 GRAPQ13588 217 aa10.53□□□□□ -0.72
PSEN1-215ENST00000556011 SUSD4Q5VX71 490 aa10.53□□□□□ -0.72
PSEN1-215ENST00000556011 CDAN1Q8IWY9 1227 aa10.53□□□□□ -0.72
PSEN1-215ENST00000556011 GRAPLQ8TC17 118 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-215ENST00000556011 FERMT2Q96AC1 680 aa10.53□□□□□ -0.72
PSEN1-215ENST00000556011 POP1Q99575 1024 aaKnown RBP10.53□□□□□ -0.72
PSEN1-215ENST00000556011 HAUS7Q99871 368 aa10.53□□□□□ -0.72
PSEN1-215ENST00000556011 CLRN2A0PK11 232 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 LCHNA4D1U4 455 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 CSF2RAP15509 400 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 C19orf57Q0VDD7 668 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 RASA3Q14644 834 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 AMOTQ4VCS5 1084 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 GPAT2Q6NUI2 795 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 GLIS3Q8NEA6 775 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 GGNBP2Q9H3C7 697 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 TNKSO95271 1327 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 NAV3Q8IVL0 2385 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
PSEN1-215ENST00000556011 NBPF19A0A087WUL8 3843 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 ARHGEF15O94989 841 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 KCNA4P22459 653 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 GPTP24298 496 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 C1orf53Q5VUE5 145 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 PSRC1Q6PGN9 363 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-215ENST00000556011 PDZD3Q86UT5 571 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 LPAR1Q92633 364 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 VEZTQ9HBM0 779 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 R4GN57 208 aa10.51□□□□□ -0.73
PSEN1-215ENST00000556011 TIMP1P01033 207 aa10.5□□□□□ -0.73
PSEN1-215ENST00000556011 ADCYAP1R1P41586 468 aa10.5□□□□□ -0.73
PSEN1-215ENST00000556011 MAP2K5Q13163 448 aa10.5□□□□□ -0.73
PSEN1-215ENST00000556011 MFSD5Q6N075 450 aa10.5□□□□□ -0.73
PSEN1-215ENST00000556011 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
PSEN1-215ENST00000556011 SPRED2Q7Z698 418 aa10.5□□□□□ -0.73
PSEN1-215ENST00000556011 ZGPATQ8N5A5 531 aaKnown RBP10.5□□□□□ -0.73
PSEN1-215ENST00000556011 RIPOR3Q96MK2 946 aa10.5□□□□□ -0.73
PSEN1-215ENST00000556011 PCDHAC2Q9Y5I4 1007 aa10.5□□□□□ -0.73
PSEN1-215ENST00000556011 UBN2Q6ZU65 1347 aa10.5□□□□□ -0.73
PSEN1-215ENST00000556011 PRR5-ARHGAP8B1AHC4 643 aa10.49□□□□□ -0.73
PSEN1-215ENST00000556011 PQBP1O60828 265 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms