RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 EAF2Q96CJ1 260 aaPredicted RBP15.54■□□□□ 0.08
HNRNPC-221ENST00000555883 TRIM47Q96LD4 638 aa15.54■□□□□ 0.08
HNRNPC-221ENST00000555883 TMEM106CQ9BVX2 250 aa15.54■□□□□ 0.08
HNRNPC-221ENST00000555883 SRRDQ9UH36 339 aa15.54■□□□□ 0.08
HNRNPC-221ENST00000555883 AGTPBP1Q9UPW5 1226 aa15.54■□□□□ 0.08
HNRNPC-221ENST00000555883 CAP2P40123 477 aa15.53■□□□□ 0.08
HNRNPC-221ENST00000555883 ZAP70P43403 619 aa15.53■□□□□ 0.08
HNRNPC-221ENST00000555883 SH3RF3Q8TEJ3 882 aaPredicted RBP15.53■□□□□ 0.08
HNRNPC-221ENST00000555883 SNRKQ9NRH2 765 aa15.53■□□□□ 0.08
HNRNPC-221ENST00000555883 GINM1Q9NU53 330 aa15.53■□□□□ 0.08
HNRNPC-221ENST00000555883 AATFQ9NY61 560 aaKnown RBP eCLIP15.53■□□□□ 0.08
HNRNPC-221ENST00000555883 PHIPQ8WWQ0 1821 aa15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 FLT1P17948 1338 aa15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 CYP2C8P10632 490 aa15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 CTGFP29279 349 aa15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 FCGRTP55899 365 aa15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 RPAP2Q8IXW5 612 aaPredicted RBP15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 ZNF280CQ8ND82 737 aa15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 PANK1Q8TE04 598 aa15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 CHMP4BQ9H444 224 aaKnown RBP15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 TLR7Q9NYK1 1049 aaKnown RBP15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 PNMA3Q9UL41 463 aa15.52■□□□□ 0.08
HNRNPC-221ENST00000555883 TRIM75PA6NK02 468 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 USP17L5A8MUK1 530 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 FMNL1O95466 1100 aaPredicted RBP15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 SLURP2P0DP57 97 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 OSBPP22059 807 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 SH3D19Q5HYK7 790 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 GADL1Q6ZQY3 521 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 ADGRA1Q86SQ6 560 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 FOXP4Q8IVH2 680 aaPredicted RBP15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 CCDC8Q9H0W5 538 aaPredicted RBP15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 PIH1D3Q9NQM4 214 aaKnown RBP15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 DDX19BQ9UMR2 479 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 PTPRFP10586 1907 aa15.51■□□□□ 0.07
HNRNPC-221ENST00000555883 FAM196BA6NMK8 535 aa15.5■□□□□ 0.07
HNRNPC-221ENST00000555883 ASNSP08243 561 aa15.5■□□□□ 0.07
HNRNPC-221ENST00000555883 EN2P19622 333 aaPredicted RBP15.5■□□□□ 0.07
HNRNPC-221ENST00000555883 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.079e-62■□□□□ 10
HNRNPC-221ENST00000555883 TGFBRAP1Q8WUH2 860 aa15.5■□□□□ 0.07
HNRNPC-221ENST00000555883 WDR18Q9BV38 432 aa15.5■□□□□ 0.07
HNRNPC-221ENST00000555883 AS3MTQ9HBK9 375 aa15.5■□□□□ 0.07
HNRNPC-221ENST00000555883 ZSWIM8A7E2V4 1837 aa15.5■□□□□ 0.07
HNRNPC-221ENST00000555883 FOCADQ5VW36 1801 aa15.5■□□□□ 0.07
HNRNPC-221ENST00000555883 LOC285556D6RIA3 1793 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 MYPNQ86TC9 1320 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 HMMRO75330 724 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 GRK4P32298 578 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 SPP2Q13103 211 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 FAM110CQ1W6H9 321 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 SLC4A8Q2Y0W8 1093 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 RAET1EQ8TD07 263 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 SMCR8Q8TEV9 937 aaPredicted RBP15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 SH3TC2Q8TF17 1288 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 ZBTB40Q9NUA8 1239 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 EXOC6BQ9Y2D4 811 aa15.49■□□□□ 0.07
HNRNPC-221ENST00000555883 IDH1O75874 414 aaKnown RBP15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 HLA-DOAP06340 250 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 CAPN2P17655 700 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 CYP7A1P22680 504 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 GCLCP48506 637 aaPredicted RBP15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 MAP3K12Q12852 859 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 IRF5Q13568 498 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 RRP1BQ14684 758 aaKnown RBP15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 TTF1Q15361 905 aaPredicted RBP15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 AACSQ86V21 672 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 MAPKAPK5Q8IW41 473 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 SLAIN1Q8ND83 568 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 RHPN1Q8TCX5 695 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 GCC1Q96CN9 775 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 KIF1BPQ96EK5 621 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 DNAJC18Q9H819 358 aa15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.48■□□□□ 0.07
HNRNPC-221ENST00000555883 SIPA1L1O43166 1804 aa15.47■□□□□ 0.07
HNRNPC-221ENST00000555883 PRKCZQ05513 592 aa15.47■□□□□ 0.07
HNRNPC-221ENST00000555883 TREML2Q5T2D2 321 aa15.47■□□□□ 0.07
HNRNPC-221ENST00000555883 CCDC84Q86UT8 332 aaPredicted RBP15.47■□□□□ 0.07
HNRNPC-221ENST00000555883 CLASRPQ8N2M8 674 aaKnown RBP15.47■□□□□ 0.07
HNRNPC-221ENST00000555883 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
HNRNPC-221ENST00000555883 PXYLP1Q8TE99 480 aa15.47■□□□□ 0.07
HNRNPC-221ENST00000555883 EHD4Q9H223 541 aa15.47■□□□□ 0.07
HNRNPC-221ENST00000555883 ATAD5Q96QE3 1844 aa15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 KIAA0100Q14667 2235 aaKnown RBP15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 C19orf81C9J6K1 198 aa15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 RAB11FIP3O75154 756 aa15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 HOXA7P31268 230 aaPredicted RBP15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 HMGCS2P54868 508 aa15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 BACE1P56817 501 aa15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 CRACR2BQ8N4Y2 399 aaPredicted RBP15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 MAGEB6Q8N7X4 407 aa15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 TRIM34Q9BYJ4 488 aa15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 PALD1Q9ULE6 856 aa15.46■□□□□ 0.07
HNRNPC-221ENST00000555883 DYNLL1P63167 89 aaKnown RBP15.45■□□□□ 0.06
HNRNPC-221ENST00000555883 UBXN2AP68543 259 aa15.45■□□□□ 0.06
HNRNPC-221ENST00000555883 TATDN1Q6P1N9 297 aa15.45■□□□□ 0.06
HNRNPC-221ENST00000555883 SIRT2Q8IXJ6 389 aa15.45■□□□□ 0.06
HNRNPC-221ENST00000555883 ANTXR1Q9H6X2 564 aa15.45■□□□□ 0.06
HNRNPC-221ENST00000555883 RCAN3Q9UKA8 241 aa15.45■□□□□ 0.06
HNRNPC-221ENST00000555883 TAOK2Q9UL54 1235 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms