RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 KRT32Q14532 448 aa14.8□□□□□ -0.04
SHMT2-221ENST00000555773 NBPF12Q5TAG4 269 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-221ENST00000555773 DCAF15Q66K64 600 aa14.8□□□□□ -0.04
SHMT2-221ENST00000555773 TRIM34Q9BYJ4 488 aa14.8□□□□□ -0.04
SHMT2-221ENST00000555773 GLIS2Q9BZE0 524 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-221ENST00000555773 SCAF8Q9UPN6 1271 aaKnown RBP14.8□□□□□ -0.04
SHMT2-221ENST00000555773 CYP2D7A0A087X1C5 515 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 ADM5C9JUS6 153 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 TOMM70O94826 608 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 NF2P35240 595 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 ANAPC15P60006 121 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 HAND2P61296 217 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 AKNAD1Q5T1N1 836 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 MFSD6Q6ZSS7 791 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 C16orf86Q6ZW13 317 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 CRACR2BQ8N4Y2 399 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-221ENST00000555773 STAG1Q8WVM7 1258 aa14.79□□□□□ -0.04
SHMT2-221ENST00000555773 ROBO3Q96MS0 1386 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 CDK8P49336 464 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 CTDSPL2Q05D32 466 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 TRDNQ13061 729 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 PRAMEF18Q5VWM3 479 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 SMC1BQ8NDV3 1235 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 RBM46Q8TBY0 533 aaKnown RBP14.78□□□□□ -0.04
SHMT2-221ENST00000555773 CDCA5Q96FF9 252 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 C22orf23Q9BZE7 217 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 CNNM2Q9H8M5 875 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHMT2-221ENST00000555773 MKNK2Q9HBH9 465 aa14.78□□□□□ -0.04
SHMT2-221ENST00000555773 ORC4O43929 436 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 PPP1R12BO60237 982 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-221ENST00000555773 ITGBL1O95965 494 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-221ENST00000555773 RBM25P49756 843 aaKnown RBP14.77□□□□□ -0.05
SHMT2-221ENST00000555773 SLC4A8Q2Y0W8 1093 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 TATDN1Q6P1N9 297 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 MIGA2Q7L4E1 593 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 CDAN1Q8IWY9 1227 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 ZNF444Q8N0Y2 327 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-221ENST00000555773 IL17RAQ96F46 866 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 DYNLL2Q96FJ2 89 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 CCDC17Q96LX7 622 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 ZNF341Q9BYN7 854 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 KRT23Q9C075 422 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 NBPF3Q9H094 633 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 ADAMTSL1Q8N6G6 1762 aa14.77□□□□□ -0.05
SHMT2-221ENST00000555773 E7EWF7 191 aa14.76□□□□□ -0.05
SHMT2-221ENST00000555773 HMGB1P09429 215 aaKnown RBP14.76□□□□□ -0.05
SHMT2-221ENST00000555773 PSMA5P28066 241 aa14.76□□□□□ -0.05
SHMT2-221ENST00000555773 EVX2Q03828 476 aa14.76□□□□□ -0.05
SHMT2-221ENST00000555773 TBC1D10CQ8IV04 446 aa14.76□□□□□ -0.05
SHMT2-221ENST00000555773 RASEFQ8IZ41 740 aa14.76□□□□□ -0.05
SHMT2-221ENST00000555773 ZNF112Q9UJU3 913 aa14.76□□□□□ -0.05
SHMT2-221ENST00000555773 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHMT2-221ENST00000555773 SNX14Q9Y5W7 946 aa14.76□□□□□ -0.05
SHMT2-221ENST00000555773 UNCXA6NJT0 531 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 SMIM22K7EJ46 135 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 SHMT1P34896 483 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 FKBP1BP68106 108 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 FSTL1Q12841 308 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 CERKLQ49MI3 558 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-221ENST00000555773 NCOA7Q8NI08 942 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 ESR2Q92731 530 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 TBC1D32Q96NH3 1257 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 TM6SF1Q9BZW5 370 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 DNAJC18Q9H819 358 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 GINM1Q9NU53 330 aa14.75□□□□□ -0.05
SHMT2-221ENST00000555773 PHF20L1A8MW92 1017 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 TRAF5O00463 557 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 CTNND1O60716 968 aaKnown RBP14.74□□□□□ -0.05
SHMT2-221ENST00000555773 USP2O75604 605 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-221ENST00000555773 IREB2P48200 963 aaKnown RBP14.74□□□□□ -0.05
SHMT2-221ENST00000555773 MAP3K11Q16584 847 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 DLK2Q6UY11 383 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 ARMC9Q7Z3E5 817 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 RALYLQ86SE5 291 aaKnown RBP14.74□□□□□ -0.05
SHMT2-221ENST00000555773 STK11IPQ8N1F8 1099 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 IL27Q8NEV9 243 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 KLRG1Q96E93 195 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 NEK1Q96PY6 1258 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 INCENPQ9NQS7 918 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 TOMM22Q9NS69 142 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 TACC3Q9Y6A5 838 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 TAF6LQ9Y6J9 622 aa14.74□□□□□ -0.05
SHMT2-221ENST00000555773 RANBP6O60518 1105 aaKnown RBP14.73□□□□□ -0.05
SHMT2-221ENST00000555773 PRDM1O75626 825 aa14.73□□□□□ -0.05
SHMT2-221ENST00000555773 RASA1P20936 1047 aa14.73□□□□□ -0.05
SHMT2-221ENST00000555773 MAP3K9P80192 1104 aa14.73□□□□□ -0.05
SHMT2-221ENST00000555773 CCDC178Q5BJE1 867 aa14.73□□□□□ -0.05
SHMT2-221ENST00000555773 STOX1Q6ZVD7 989 aa14.73□□□□□ -0.05
SHMT2-221ENST00000555773 SLC44A5Q8NCS7 719 aa14.73□□□□□ -0.05
SHMT2-221ENST00000555773 MTA3Q9BTC8 594 aa14.73□□□□□ -0.05
SHMT2-221ENST00000555773 CABP5Q9NP86 173 aa14.73□□□□□ -0.05
SHMT2-221ENST00000555773 ECM29Q5VYK3 1845 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 FAM196BA6NMK8 535 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 CELF2O95319 508 aaKnown RBP14.72□□□□□ -0.05
SHMT2-221ENST00000555773 CAP2P40123 477 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 TFAP4Q01664 338 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 RRP12Q5JTH9 1297 aaKnown RBP14.72□□□□□ -0.05
SHMT2-221ENST00000555773 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
SHMT2-221ENST00000555773 C2orf69Q8N8R5 385 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms