RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, human

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTN1-215	ENST00000555616	BCL11A	Q9H165	835 aa		11.66	□□□□□ -0.54
ACTN1-215	ENST00000555616	DHX36	Q9H2U1	1008 aa	Known RBP	11.66	□□□□□ -0.54
ACTN1-215	ENST00000555616	HERC5	Q9UII4	1024 aa	Known RBP	11.66	□□□□□ -0.54
ACTN1-215	ENST00000555616	GOLIM4	O00461	696 aa		11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	SMARCA5	O60264	1052 aa	Predicted RBP	11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	CTNND1	O60716	968 aa	Known RBP	11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	PDE6A	P16499	860 aa		11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	DYNLL1	P63167	89 aa	Known RBP	11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	MOGS	Q13724	837 aa		11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	TAF1C	Q15572	869 aa	Predicted RBP	11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	MAPKAPK5	Q8IW41	473 aa		11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	MIGA1	Q8NAN2	632 aa		11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	GPATCH3	Q96I76	525 aa		11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	DNAJC2	Q99543	621 aa	Known RBP	11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	RIOK1	Q9BRS2	568 aa	Known RBP	11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	PICK1	Q9NRD5	415 aa		11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.65	□□□□□ -0.54
ACTN1-215	ENST00000555616	CDK5RAP2	Q96SN8	1893 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	FAM196B	A6NMK8	535 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	BTBD19	C9JJ37	291 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	CXCL11	O14625	94 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	PTPRA	P18433	802 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	PKN2	Q16513	984 aa	Known RBP	11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	ANKRD23	Q86SG2	305 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	METTL16	Q86W50	562 aa	Known RBP	11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	TGFBRAP1	Q8WUH2	860 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	HAUS7	Q99871	368 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	6e-7	■■■■■ 31.5
ACTN1-215	ENST00000555616	PAG1	Q9NWQ8	432 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	PI4KB	Q9UBF8	816 aa		11.64	□□□□□ -0.55
ACTN1-215	ENST00000555616	HTT	P42858	3142 aa		11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616		A0A0G2JLL6	359 aa	Predicted RBP	11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	TCRBV5S4A2T	A0A5A2	114 aa		11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	SLC9C2	Q5TAH2	1124 aa		11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	EDC3	Q96F86	508 aa	Known RBP	11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	ERO1A	Q96HE7	468 aa		11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	DNAJC18	Q9H819	358 aa		11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	ZFYVE28	Q9HCC9	887 aa		11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	AFG3L2	Q9Y4W6	797 aa		11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	ZHX2	Q9Y6X8	837 aa		11.63	□□□□□ -0.55
ACTN1-215	ENST00000555616	ADGRA2	Q96PE1	1338 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	ZNF532	Q9HCE3	1301 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	MAGEB6P1	A0A0J9YX57	407 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	TLR2	O60603	784 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	HLA-DOA	P06340	250 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	MX1	P20591	662 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	PDE4A	P27815	886 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	CAP2	P40123	477 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	RRP1B	Q14684	758 aa	Known RBP	11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	BOLA2	Q9H3K6	86 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	ECHDC1	Q9NTX5	307 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	PALD1	Q9ULE6	856 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	PHIP	Q8WWQ0	1821 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	AK9	Q5TCS8	1911 aa		11.62	□□□□□ -0.55
ACTN1-215	ENST00000555616	PDHX	O00330	501 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	ADD2	P35612	726 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	SP3	Q02447	781 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	MLLT1	Q03111	559 aa	Predicted RBP	11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	GPAT2	Q6NUI2	795 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	FASTKD5	Q7L8L6	764 aa	Known RBP	11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	TBC1D2	Q9BYX2	928 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.61	□□□□□ -0.55	5e-6	■■■■■ 34.6
ACTN1-215	ENST00000555616	EHD4	Q9H223	541 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	SAP30BP	Q9UHR5	308 aa	Known RBP	11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	HPS5	Q9UPZ3	1129 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	SLC45A1	Q9Y2W3	748 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	LOC285556	D6RIA3	1793 aa		11.61	□□□□□ -0.55
ACTN1-215	ENST00000555616	TTC41P	Q6P2S7	1318 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	NAV1	Q8NEY1	1877 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	CCDC85C	A6NKD9	419 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	ERC2	O15083	957 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	USP5	P45974	858 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	PDE1A	P54750	535 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	UBE3C	Q15386	1083 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	OTOP1	Q7RTM1	612 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	CCDC84	Q86UT8	332 aa	Predicted RBP	11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	PLEKHM2	Q8IWE5	1019 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	CD99L2	Q8TCZ2	262 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	PARK7	Q99497	189 aa	Known RBP	11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	GINM1	Q9NU53	330 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	STAP2	Q9UGK3	403 aa		11.6	□□□□□ -0.55
ACTN1-215	ENST00000555616	PTPRF	P10586	1907 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	ATAD5	Q96QE3	1844 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	TRIM75P	A6NK02	468 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	USP17L5	A8MUK1	530 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	ASNS	P08243	561 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	CAP1	Q01518	475 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	C17orf99	Q6UX52	265 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	SKAP1	Q86WV1	359 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	LCORL	Q8N3X6	602 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	ZNF280C	Q8ND82	737 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	TRIM34	Q9BYJ4	488 aa		11.59	□□□□□ -0.55
ACTN1-215	ENST00000555616	OSBPL3	Q9H4L5	887 aa		11.59	□□□□□ -0.55

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