RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 FAM43AQ8N2R8 423 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 LCORLQ8N3X6 602 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 PI4K2BQ8TCG2 481 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 CFHR5Q9BXR6 569 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.58■□□□□ 0.24
SNX6-203ENST00000555416 SALL3Q9BXA9 1300 aa16.58■□□□□ 0.24
SNX6-203ENST00000555416 PTPRAP18433 802 aa16.57■□□□□ 0.24
SNX6-203ENST00000555416 CRHR2Q13324 411 aa16.57■□□□□ 0.24
SNX6-203ENST00000555416 MOGSQ13724 837 aa16.57■□□□□ 0.24
SNX6-203ENST00000555416 IFFO2Q5TF58 517 aa16.57■□□□□ 0.24
SNX6-203ENST00000555416 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
SNX6-203ENST00000555416 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
SNX6-203ENST00000555416 PI4KBQ9UBF8 816 aa16.57■□□□□ 0.24
SNX6-203ENST00000555416 KCNH4Q9UQ05 1017 aa16.57■□□□□ 0.24
SNX6-203ENST00000555416 DOCK1Q14185 1865 aa16.56■□□□□ 0.24
SNX6-203ENST00000555416 BTBD19C9JJ37 291 aa16.56■□□□□ 0.24
SNX6-203ENST00000555416 GPR25O00155 361 aa16.56■□□□□ 0.24
SNX6-203ENST00000555416 PRKAB2O43741 272 aa16.56■□□□□ 0.24
SNX6-203ENST00000555416 CTNND1O60716 968 aaKnown RBP16.56■□□□□ 0.24
SNX6-203ENST00000555416 USP5P45974 858 aa16.56■□□□□ 0.24
SNX6-203ENST00000555416 SNAPC2Q13487 334 aa16.56■□□□□ 0.24
SNX6-203ENST00000555416 TMED8Q6PL24 325 aaPredicted RBP16.56■□□□□ 0.24
SNX6-203ENST00000555416 METTL16Q86W50 562 aaKnown RBP16.56■□□□□ 0.24
SNX6-203ENST00000555416 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
SNX6-203ENST00000555416 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
SNX6-203ENST00000555416 PHIPQ8WWQ0 1821 aa16.56■□□□□ 0.24
SNX6-203ENST00000555416 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
SNX6-203ENST00000555416 MYH1P12882 1939 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 MYH7P12883 1935 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 MBD4O95243 580 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 CETPP11597 493 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 CAP1Q01518 475 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 AAMPQ13685 434 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 SDR42E1Q8WUS8 393 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 GCC1Q96CN9 775 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
SNX6-203ENST00000555416 SMIM22K7EJ46 135 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 MX1P20591 662 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 CAP2P40123 477 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 PLCD1P51178 756 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 GPATCH3Q96I76 525 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 PUS7LQ9H0K6 701 aaKnown RBP16.54■□□□□ 0.24
SNX6-203ENST00000555416 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
SNX6-203ENST00000555416 HERC5Q9UII4 1024 aaKnown RBP16.54■□□□□ 0.24
SNX6-203ENST00000555416 TTC41PQ6P2S7 1318 aa16.53■□□□□ 0.24
SNX6-203ENST00000555416 CYP2D6P10635 497 aa16.53■□□□□ 0.24
SNX6-203ENST00000555416 DGKZQ13574 1117 aa16.53■□□□□ 0.24
SNX6-203ENST00000555416 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
SNX6-203ENST00000555416 GPAT2Q6NUI2 795 aa16.53■□□□□ 0.24
SNX6-203ENST00000555416 CERS3Q8IU89 383 aa16.53■□□□□ 0.24
SNX6-203ENST00000555416 FOXP4Q8IVH2 680 aaPredicted RBP16.53■□□□□ 0.24
SNX6-203ENST00000555416 CRNKL1Q9BZJ0 848 aaKnown RBP16.53■□□□□ 0.24
SNX6-203ENST00000555416 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX6-203ENST00000555416 ATAD5Q96QE3 1844 aa16.53■□□□□ 0.24
SNX6-203ENST00000555416 CAPN15O75808 1086 aa16.52■□□□□ 0.24
SNX6-203ENST00000555416 TAF1CQ15572 869 aaPredicted RBP16.52■□□□□ 0.24
SNX6-203ENST00000555416 NOM1Q5C9Z4 860 aaKnown RBP16.52■□□□□ 0.24
SNX6-203ENST00000555416 OTUD7BQ6GQQ9 843 aa16.52■□□□□ 0.24
SNX6-203ENST00000555416 B4GALNT3Q6L9W6 998 aa16.52■□□□□ 0.24
SNX6-203ENST00000555416 CRACR2BQ8N4Y2 399 aaPredicted RBP16.52■□□□□ 0.24
SNX6-203ENST00000555416 OSBP2Q969R2 916 aa16.52■□□□□ 0.24
SNX6-203ENST00000555416 LNPKQ9C0E8 428 aa16.52■□□□□ 0.24
SNX6-203ENST00000555416 RWDD1Q9H446 243 aaPredicted RBP16.52■□□□□ 0.24
SNX6-203ENST00000555416 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.24
SNX6-203ENST00000555416 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.23
SNX6-203ENST00000555416 PTPRFP10586 1907 aa16.51■□□□□ 0.23
SNX6-203ENST00000555416 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
SNX6-203ENST00000555416 TRIM75PA6NK02 468 aa16.51■□□□□ 0.23
SNX6-203ENST00000555416 CXCL11O14625 94 aa16.51■□□□□ 0.23
SNX6-203ENST00000555416 FKTNO75072 461 aa16.51■□□□□ 0.23
SNX6-203ENST00000555416 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
SNX6-203ENST00000555416 GDF11O95390 407 aa16.51■□□□□ 0.23
SNX6-203ENST00000555416 PRRT2Q7Z6L0 340 aaPredicted RBP16.51■□□□□ 0.23
SNX6-203ENST00000555416 STAP2Q9UGK3 403 aa16.51■□□□□ 0.23
SNX6-203ENST00000555416 CYP2D7A0A087X1C5 515 aa16.5■□□□□ 0.23
SNX6-203ENST00000555416 ERC2O15083 957 aa16.5■□□□□ 0.23
SNX6-203ENST00000555416 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
SNX6-203ENST00000555416 HLA-DOAP06340 250 aa16.5■□□□□ 0.23
SNX6-203ENST00000555416 PDE1AP54750 535 aa16.5■□□□□ 0.23
SNX6-203ENST00000555416 ANKRD23Q86SG2 305 aa16.5■□□□□ 0.23
SNX6-203ENST00000555416 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
SNX6-203ENST00000555416 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
SNX6-203ENST00000555416 BAZ2AQ9UIF9 1905 aaKnown RBP16.49■□□□□ 0.23
SNX6-203ENST00000555416 M0R2C6 588 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 PDHXO00330 501 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 SHMT1P34896 483 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 GABPAQ06546 454 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 SPP2Q13103 211 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 CTU1Q7Z7A3 348 aaKnown RBP16.49■□□□□ 0.23
SNX6-203ENST00000555416 SLC44A5Q8NCS7 719 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 STRBPQ96SI9 672 aaKnown RBP16.49■□□□□ 0.23
SNX6-203ENST00000555416 EHD4Q9H223 541 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 SERPINB13Q9UIV8 391 aa16.49■□□□□ 0.23
SNX6-203ENST00000555416 ADGRA2Q96PE1 1338 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms