RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CTNNA3Q9UI47 895 aa15.13■□□□□ 0.01
SYNE2-219ENST00000555323 PHF20L1A8MW92 1017 aa15.12■□□□□ 0.01
SYNE2-219ENST00000555323 FGRP09769 529 aa15.12■□□□□ 0.01
SYNE2-219ENST00000555323 CYP2D6P10635 497 aa15.12■□□□□ 0.01
SYNE2-219ENST00000555323 LDLRAD1Q5T700 205 aa15.12■□□□□ 0.01
SYNE2-219ENST00000555323 TATDN1Q6P1N9 297 aa15.12■□□□□ 0.01
SYNE2-219ENST00000555323 ZNF341Q9BYN7 854 aa15.12■□□□□ 0.01
SYNE2-219ENST00000555323 DNAJC18Q9H819 358 aa15.12■□□□□ 0.01
SYNE2-219ENST00000555323 GBA2Q9HCG7 927 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-219ENST00000555323 CYP2D7A0A087X1C5 515 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 MINDY4BA8MYZ0 360 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
SYNE2-219ENST00000555323 EVX2Q03828 476 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 PPARAQ07869 468 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 C16orf86Q6ZW13 317 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 ARMC9Q7Z3E5 817 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
SYNE2-219ENST00000555323 C2orf69Q8N8R5 385 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.11■□□□□ 0.01
SYNE2-219ENST00000555323 SWAP70Q9UH65 585 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
SYNE2-219ENST00000555323 DDX60LQ5H9U9 1706 aaKnown RBP15.11■□□□□ 0.01
SYNE2-219ENST00000555323 ROBO3Q96MS0 1386 aa15.11■□□□□ 0.01
SYNE2-219ENST00000555323 TMEM88BA6NKF7 163 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 ZNF213O14771 459 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 REC8O95072 547 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 SLURP2P0DP57 97 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 APLP1P51693 650 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 MAP3K9P80192 1104 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 NECTIN1Q15223 517 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 C8orf34Q49A92 452 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.1■□□□□ 0.01
SYNE2-219ENST00000555323 ZNF408Q9H9D4 720 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 ANO2Q9NQ90 1003 aa15.1■□□□□ 0.01
SYNE2-219ENST00000555323 PCP11498 1178 aaKnown RBP15.09■□□□□ 0.01
SYNE2-219ENST00000555323 SHMT1P34896 483 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 IREB2P48200 963 aaKnown RBP15.09■□□□□ 0.01
SYNE2-219ENST00000555323 CDK8P49336 464 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 C1QTNF8P60827 252 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 SLC4A8Q2Y0W8 1093 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 SAPCD2Q86UD0 394 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 CRACR2BQ8N4Y2 399 aaPredicted RBP15.09■□□□□ 0.01
SYNE2-219ENST00000555323 DYNLL2Q96FJ2 89 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 GINM1Q9NU53 330 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 ANGEL1Q9UNK9 670 aaKnown RBP15.09■□□□□ 0.01
SYNE2-219ENST00000555323 TLL2Q9Y6L7 1015 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 MYH1P12882 1939 aa15.09■□□□□ 0.01
SYNE2-219ENST00000555323 CTNND1O60716 968 aaKnown RBP15.08■□□□□ 0
SYNE2-219ENST00000555323 SLC3A2P08195 630 aaKnown RBP15.08■□□□□ 0
SYNE2-219ENST00000555323 NT5C2P49902 561 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 RRP1BQ14684 758 aaKnown RBP15.08■□□□□ 0
SYNE2-219ENST00000555323 IMMTQ16891 758 aaKnown RBP15.08■□□□□ 0
SYNE2-219ENST00000555323 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.08■□□□□ 0
SYNE2-219ENST00000555323 MOB2Q70IA6 237 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 ANKRD13AQ8IZ07 590 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 HHIPL1Q96JK4 782 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 USP26Q9BXU7 913 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 NBPF3Q9H094 633 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 ZNF287Q9HBT7 754 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 CREBZFQ9NS37 354 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 FZD1Q9UP38 647 aa15.08■□□□□ 0
SYNE2-219ENST00000555323 RBM8AQ9Y5S9 174 aaKnown RBP15.08■□□□□ 0
SYNE2-219ENST00000555323 BAZ2AQ9UIF9 1905 aaKnown RBP15.07■□□□□ 0
SYNE2-219ENST00000555323 FAM196BA6NMK8 535 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 UBE2Q2LH0YL09 131 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 CYP21A2P08686 494 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 CAP2P40123 477 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 PDE4BQ07343 736 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 PRKG1Q13976 671 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 TSGA10IPQ3SY00 556 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 NOL9Q5SY16 702 aaKnown RBP15.07■□□□□ 0
SYNE2-219ENST00000555323 STAG1Q8WVM7 1258 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 KCNB2Q92953 911 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 CCDC17Q96LX7 622 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 WRNIP1Q96S55 665 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 TRIM34Q9BYJ4 488 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.07■□□□□ 0
SYNE2-219ENST00000555323 TACC3Q9Y6A5 838 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 SIPA1L1O43166 1804 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 NAV1Q8NEY1 1877 aa15.07■□□□□ 0
SYNE2-219ENST00000555323 TRPM7Q96QT4 1865 aa15.06■□□□□ 0
SYNE2-219ENST00000555323 ORC4O43929 436 aa15.06■□□□□ 0
SYNE2-219ENST00000555323 INPP5BP32019 993 aa15.06■□□□□ 0
SYNE2-219ENST00000555323 HAND2P61296 217 aa15.06■□□□□ 0
SYNE2-219ENST00000555323 CTDSPL2Q05D32 466 aa15.06■□□□□ 0
SYNE2-219ENST00000555323 TTLL12Q14166 644 aaPredicted RBP15.06■□□□□ 0
SYNE2-219ENST00000555323 CERKLQ49MI3 558 aaPredicted RBP15.06■□□□□ 0
SYNE2-219ENST00000555323 AKNAD1Q5T1N1 836 aa15.06■□□□□ 0
SYNE2-219ENST00000555323 SLC44A5Q8NCS7 719 aa15.06■□□□□ 0
SYNE2-219ENST00000555323 PAPPA2Q9BXP8 1791 aa15.06■□□□□ 0
SYNE2-219ENST00000555323 SLC27A2O14975 620 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 SEC24BO95487 1268 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 RASA1P20936 1047 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 HSPA4P34932 840 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 HUNKP57058 714 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 CREB3L3Q68CJ9 461 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 MFSD6Q6ZSS7 791 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 SCYL3Q8IZE3 742 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 ZKSCAN4Q969J2 545 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms