RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 INCENPQ9NQS7 918 aa16.9■□□□□ 0.3
IFT43-209ENST00000555305 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
IFT43-209ENST00000555305 GAKO14976 1311 aa16.9■□□□□ 0.3
IFT43-209ENST00000555305 G3V3G9 751 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 FMNL1O95466 1100 aaPredicted RBP16.89■□□□□ 0.3
IFT43-209ENST00000555305 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.3
IFT43-209ENST00000555305 NTRK3Q16288 839 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 DCAF8Q5TAQ9 597 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 C12orf60Q5U649 245 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 TTC6Q86TZ1 520 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 FANCBQ8NB91 859 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 ALG1Q9BT22 464 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 JAG2Q9Y219 1238 aa16.89■□□□□ 0.3
IFT43-209ENST00000555305 LAMB1P07942 1786 aa16.89■□□□□ 0.29
IFT43-209ENST00000555305 XRCC6P12956 609 aaKnown RBP eCLIP16.89■□□□□ 0.29
IFT43-209ENST00000555305 PODNQ7Z5L7 613 aa16.89■□□□□ 0.29
IFT43-209ENST00000555305 EP400Q96L91 3159 aa16.89■□□□□ 0.29
IFT43-209ENST00000555305 CDC27P30260 824 aa16.88■□□□□ 0.29
IFT43-209ENST00000555305 BTDP43251 543 aa16.88■□□□□ 0.29
IFT43-209ENST00000555305 FKBP1AP62942 108 aaKnown RBP16.88■□□□□ 0.29
IFT43-209ENST00000555305 EZH2Q15910 746 aaKnown RBP16.88■□□□□ 0.29
IFT43-209ENST00000555305 ENAHQ8N8S7 591 aaPredicted RBP16.88■□□□□ 0.29
IFT43-209ENST00000555305 ZNF622Q969S3 477 aaKnown RBP eCLIP16.88■□□□□ 0.29
IFT43-209ENST00000555305 GPR101Q96P66 508 aaPredicted RBP16.88■□□□□ 0.29
IFT43-209ENST00000555305 RBM27Q9P2N5 1060 aaKnown RBP16.88■□□□□ 0.29
IFT43-209ENST00000555305 RCOR1Q9UKL0 485 aa16.88■□□□□ 0.29
IFT43-209ENST00000555305 SYCE3A1L190 88 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 DEXIO95424 95 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 XBP1P17861 261 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
IFT43-209ENST00000555305 DIXDC1Q155Q3 683 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
IFT43-209ENST00000555305 FAM217BQ9NTX9 383 aaPredicted RBP16.87■□□□□ 0.29
IFT43-209ENST00000555305 TSPY2A6NKD2 308 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 DTNBO60941 627 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 AKAP17AQ02040 695 aaKnown RBP16.87■□□□□ 0.29
IFT43-209ENST00000555305 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
IFT43-209ENST00000555305 MSL1Q68DK7 614 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 GAS2L3Q86XJ1 694 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 DGKHQ86XP1 1220 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 SUPT20HQ8NEM7 779 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 SLC16A10Q8TF71 515 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 ZKSCAN3Q9BRR0 538 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 RNF26Q9BY78 433 aaPredicted RBP16.87■□□□□ 0.29
IFT43-209ENST00000555305 SENP2Q9HC62 589 aa16.87■□□□□ 0.29
IFT43-209ENST00000555305 DDX19AQ9NUU7 478 aaKnown RBP16.87■□□□□ 0.29
IFT43-209ENST00000555305 YEATS4O95619 227 aa16.86■□□□□ 0.29
IFT43-209ENST00000555305 POLR3DP05423 398 aaPredicted RBP16.86■□□□□ 0.29
IFT43-209ENST00000555305 GTF2IP78347 998 aa16.86■□□□□ 0.29
IFT43-209ENST00000555305 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
IFT43-209ENST00000555305 NKX2-3Q8TAU0 364 aa16.86■□□□□ 0.29
IFT43-209ENST00000555305 KCNG4Q8TDN1 519 aa16.86■□□□□ 0.29
IFT43-209ENST00000555305 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
IFT43-209ENST00000555305 POLR3EQ9NVU0 708 aa16.86■□□□□ 0.29
IFT43-209ENST00000555305 RTEL1Q9NZ71 1219 aa16.86■□□□□ 0.29
IFT43-209ENST00000555305 TFIP11Q9UBB9 837 aaKnown RBP16.86■□□□□ 0.29
IFT43-209ENST00000555305 CYP2D7A0A087X1C5 515 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 NASPP49321 788 aaPredicted RBP16.85■□□□□ 0.29
IFT43-209ENST00000555305 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
IFT43-209ENST00000555305 RAB11FIP4Q86YS3 637 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 CRACR2BQ8N4Y2 399 aaPredicted RBP16.85■□□□□ 0.29
IFT43-209ENST00000555305 TGFBRAP1Q8WUH2 860 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 ANKS1AQ92625 1134 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 MRIQ9BWK5 157 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 SLC26A6Q9BXS9 759 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 TSPY26PQ9H489 355 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 MKNK2Q9HBH9 465 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
IFT43-209ENST00000555305 TAOK2Q9UL54 1235 aa16.85■□□□□ 0.29
IFT43-209ENST00000555305 COL11A2P13942 1736 aaPredicted RBP16.85■□□□□ 0.29
IFT43-209ENST00000555305 RIMBP2O15034 1052 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 RXRAP19793 462 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 KIF5BP33176 963 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
IFT43-209ENST00000555305 ZNF444Q8N0Y2 327 aaPredicted RBP16.84■□□□□ 0.29
IFT43-209ENST00000555305 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 CTCFLQ8NI51 663 aaPredicted RBP16.84■□□□□ 0.29
IFT43-209ENST00000555305 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 MYL10Q9BUA6 226 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 USP17L8P0C7I0 530 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 KRT40Q6A162 431 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 HHIPL2Q6UWX4 724 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 CCDC144CPQ8IYA2 1237 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 BICD2Q8TD16 824 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 PHKBQ93100 1093 aa16.84■□□□□ 0.29
IFT43-209ENST00000555305 TCHHQ07283 1943 aa16.83■□□□□ 0.29
IFT43-209ENST00000555305 PRDM1O75626 825 aa16.83■□□□□ 0.28
IFT43-209ENST00000555305 U2AF2P26368 475 aaKnown RBP eCLIP16.83■□□□□ 0.28
IFT43-209ENST00000555305 FOSBP53539 338 aa16.83■□□□□ 0.28
IFT43-209ENST00000555305 GUCY1B3Q02153 619 aa16.83■□□□□ 0.28
IFT43-209ENST00000555305 MYSM1Q5VVJ2 828 aa16.83■□□□□ 0.28
IFT43-209ENST00000555305 RHBDL3P58872 404 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 HDLBPQ00341 1268 aaKnown RBP16.82■□□□□ 0.28
IFT43-209ENST00000555305 TROAPQ12815 778 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 GRIK5Q16478 980 aa16.82■□□□□ 0.28
IFT43-209ENST00000555305 STRIP1Q5VSL9 837 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms