RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RBM27Q9P2N5 1060 aaKnown RBP10.42□□□□□ -0.74
TDP1-210ENST00000554976 MYH4Q9Y623 1939 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 ZBTB43O43298 467 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 MBD3O95983 291 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 KCNQ5Q9NR82 932 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 IL17RBQ9NRM6 502 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 TCP11L1Q9NUJ3 509 aa10.42□□□□□ -0.74
TDP1-210ENST00000554976 KIF28PB7ZC32 967 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 RIMBP2O15034 1052 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 DHX16O60231 1041 aaKnown RBP10.41□□□□□ -0.74
TDP1-210ENST00000554976 LDHCP07864 332 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 IFNAR1P17181 557 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 RXRAP19793 462 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 UBE2HP62256 183 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 GTF2IP78347 998 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 WTAPQ15007 396 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 FBXO18Q8NFZ0 1043 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 SLC16A10Q8TF71 515 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 MRIQ9BWK5 157 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 ISY1Q9ULR0 285 aaKnown RBP10.41□□□□□ -0.74
TDP1-210ENST00000554976 COL2A1P02458 1487 aaPredicted RBP10.41□□□□□ -0.74
TDP1-210ENST00000554976 UBE2Q2LH0YL09 131 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 PLCD1P51178 756 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 TROAPQ12815 778 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 FERMT3Q86UX7 667 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 ZNF654Q8IZM8 581 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 TMTC2Q8N394 836 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 MXD3Q9BW11 206 aa10.41□□□□□ -0.74
TDP1-210ENST00000554976 GZF1Q9H116 711 aaPredicted RBP10.41□□□□□ -0.74
TDP1-210ENST00000554976 BAG3O95817 575 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 DACT2Q5SW24 774 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 PODNQ7Z5L7 613 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 LEO1Q8WVC0 666 aaPredicted RBP10.4□□□□□ -0.74
TDP1-210ENST00000554976 GOLGA8AA7E2F4 631 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 GABPAQ06546 454 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 FOXD4L6Q3SYB3 417 aaPredicted RBP10.4□□□□□ -0.74
TDP1-210ENST00000554976 CAVIN1Q6NZI2 390 aaKnown RBP10.4□□□□□ -0.74
TDP1-210ENST00000554976 HHIPL2Q6UWX4 724 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 FOXD4L3Q6VB84 417 aaPredicted RBP10.4□□□□□ -0.74
TDP1-210ENST00000554976 TGFBRAP1Q8WUH2 860 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 PGBD1Q96JS3 809 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 EYA3Q99504 573 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 GJB4Q9NTQ9 266 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 SLC12A7Q9Y666 1083 aa10.4□□□□□ -0.74
TDP1-210ENST00000554976 NMT2O60551 498 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 PRDM1O75626 825 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
TDP1-210ENST00000554976 KIF23Q02241 960 aaPredicted RBP10.39□□□□□ -0.75
TDP1-210ENST00000554976 KIAA2012Q0VF49 1180 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
TDP1-210ENST00000554976 APOBEC3HQ6NTF7 200 aaKnown RBP10.39□□□□□ -0.75
TDP1-210ENST00000554976 MICU3Q86XE3 530 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 KLHL34Q8N239 644 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 ZNF622Q969S3 477 aaKnown RBP eCLIP10.39□□□□□ -0.75
TDP1-210ENST00000554976 DYNLL2Q96FJ2 89 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 AIFM3Q96NN9 605 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 MCM9Q9NXL9 1143 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 ORC3Q9UBD5 711 aaPredicted RBP10.39□□□□□ -0.75
TDP1-210ENST00000554976 CCDC69A6NI79 296 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 PPFIA3O75145 1194 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 DDAH1O94760 285 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 RASA1P20936 1047 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 GUCY1A2P33402 732 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 PKN1Q16512 942 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 STRIP1Q5VSL9 837 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 ATL3Q6DD88 541 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 CCDC125Q86Z20 511 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 CRACR2BQ8N4Y2 399 aaPredicted RBP10.39□□□□□ -0.75
TDP1-210ENST00000554976 SGIP1Q9BQI5 828 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 ZC3H12CQ9C0D7 883 aaKnown RBP10.39□□□□□ -0.75
TDP1-210ENST00000554976 DDX4Q9NQI0 724 aaKnown RBP10.39□□□□□ -0.75
TDP1-210ENST00000554976 ECE2O60344 883 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.75
TDP1-210ENST00000554976 KRT85P78386 507 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 STK11IPQ8N1F8 1099 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 FANCBQ8NB91 859 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 PHKBQ93100 1093 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 RCOR1Q9UKL0 485 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 KIF3AQ9Y496 699 aa10.39□□□□□ -0.75
TDP1-210ENST00000554976 FIBPO43427 364 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 CDKL5O76039 1030 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 PLCG2P16885 1265 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 PPP2R5BQ15173 497 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 CC2D2BQ6DHV5 1058 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 MAPKAPK5Q8IW41 473 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 SLF2Q8IX21 1173 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 PSMD1Q99460 953 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 MAP3K14Q99558 947 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 FUCA2Q9BTY2 467 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 DICER1Q9UPY3 1922 aaKnown RBP10.38□□□□□ -0.75
TDP1-210ENST00000554976 CNTNAP5Q8WYK1 1306 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 IGKV6D-41A0A0C4DH26 115 aa10.38□□□□□ -0.75
TDP1-210ENST00000554976 XRCC6P12956 609 aaKnown RBP eCLIP10.38□□□□□ -0.75
TDP1-210ENST00000554976 SART3Q15020 963 aaKnown RBP10.38□□□□□ -0.75
TDP1-210ENST00000554976 FAM47AQ5JRC9 791 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms