RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 COPRSQ9NQ92 184 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 C1GALT1Q9NS00 363 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-214ENST00000554819 WDR64B1ANS9 1081 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 CILPO75339 1184 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 F13A1P00488 732 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 ETF1P62495 437 aaKnown RBP6.73□□□□□ -1.33
SCFD1-214ENST00000554819 FAM160A1Q05DH4 1040 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 PDE4BQ07343 736 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 DUSP27Q5VZP5 1158 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 BNC2Q6ZN30 1099 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-214ENST00000554819 FBXL6Q8N531 539 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 SHKBP1Q8TBC3 707 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 OSBPL1AQ9BXW6 950 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 RNF112Q9ULX5 631 aa6.73□□□□□ -1.33
SCFD1-214ENST00000554819 SUPT16HQ9Y5B9 1047 aaKnown RBP6.73□□□□□ -1.33
SCFD1-214ENST00000554819 FAM221AA4D161 298 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 DYNC1LI2O43237 492 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-214ENST00000554819 F13BP05160 661 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 NTF4P34130 210 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 CDK8P49336 464 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 MPP2Q14168 576 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 FBXL19Q6PCT2 694 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 OGFOD3Q6PK18 319 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 USP48Q86UV5 1035 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 ZDHHC13Q8IUH4 622 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 KCNQ5Q9NR82 932 aa6.72□□□□□ -1.33
SCFD1-214ENST00000554819 GREM1O60565 184 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 GARTP22102 1010 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 GRK4P32298 578 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 ADMP35318 185 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 GRIK1P39086 918 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 CYP27C1Q4G0S4 372 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 FAM196AQ6ZSG2 479 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 HID1Q8IV36 788 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 ZNF296Q8WUU4 475 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-214ENST00000554819 GATA6Q92908 595 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 LEMD3Q9Y2U8 911 aa6.71□□□□□ -1.34
SCFD1-214ENST00000554819 LRIG2O94898 1065 aa6.7□□□□□ -1.34
SCFD1-214ENST00000554819 PGRP06401 933 aa6.7□□□□□ -1.34
SCFD1-214ENST00000554819 CAP2P40123 477 aa6.7□□□□□ -1.34
SCFD1-214ENST00000554819 RBM25P49756 843 aaKnown RBP6.7□□□□□ -1.34
SCFD1-214ENST00000554819 ZMYM1Q5SVZ6 1142 aa6.7□□□□□ -1.34
SCFD1-214ENST00000554819 ADAM30Q9UKF2 790 aa6.7□□□□□ -1.34
SCFD1-214ENST00000554819 PRR19A6NJB7 356 aa6.69□□□□□ -1.34
SCFD1-214ENST00000554819 CDK5R2Q13319 367 aa6.69□□□□□ -1.34
SCFD1-214ENST00000554819 CWF19L2Q2TBE0 894 aaKnown RBP6.69□□□□□ -1.34
SCFD1-214ENST00000554819 INTS5Q6P9B9 1019 aaKnown RBP6.69□□□□□ -1.34
SCFD1-214ENST00000554819 MFSD2AQ8NA29 543 aa6.69□□□□□ -1.34
SCFD1-214ENST00000554819 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
SCFD1-214ENST00000554819 SPON2Q9BUD6 331 aa6.69□□□□□ -1.34
SCFD1-214ENST00000554819 LRRC3Q9BY71 257 aa6.69□□□□□ -1.34
SCFD1-214ENST00000554819 PIM2Q9P1W9 311 aa6.69□□□□□ -1.34
SCFD1-214ENST00000554819 ADAMTS1Q9UHI8 967 aa6.69□□□□□ -1.34
SCFD1-214ENST00000554819 FAM170BA6NMN3 283 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 COBLO75128 1261 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 TGFB1P01137 390 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 FAM87AP0C7U9 286 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 ZNF394Q53GI3 561 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 SLC6A19Q695T7 634 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 ZNF765Q7L2R6 523 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 REC114Q7Z4M0 266 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 KIAA0825Q8IV33 1275 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 ZNF654Q8IZM8 581 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 SHISA5Q8N114 240 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 NT5C1AQ9BXI3 368 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 FOXQ1Q9C009 403 aa6.68□□□□□ -1.34
SCFD1-214ENST00000554819 CYP26A1O43174 497 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 PLCG1P19174 1290 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 HDLBPQ00341 1268 aaKnown RBP6.67□□□□□ -1.34
SCFD1-214ENST00000554819 APOBRQ0VD83 1088 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 MLECQ14165 292 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 SLBPQ14493 270 aaKnown RBP eCLIP6.67□□□□□ -1.34
SCFD1-214ENST00000554819 ARMCX6Q7L4S7 300 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 METTL16Q86W50 562 aaKnown RBP6.67□□□□□ -1.34
SCFD1-214ENST00000554819 MCATQ8IVS2 390 aaKnown RBP6.67□□□□□ -1.34
SCFD1-214ENST00000554819 MRPL41Q8IXM3 137 aaKnown RBP6.67□□□□□ -1.34
SCFD1-214ENST00000554819 ZNF428Q96B54 188 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 DUSP23Q9BVJ7 150 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 FBRSQ9HAH7 460 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 PRDM10Q9NQV6 1147 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 DDX41Q9UJV9 622 aaKnown RBP6.67□□□□□ -1.34
SCFD1-214ENST00000554819 PRR36Q9H6K5 1346 aa6.67□□□□□ -1.34
SCFD1-214ENST00000554819 E9PSI1 815 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 TLR3O15455 904 aaKnown RBP6.66□□□□□ -1.34
SCFD1-214ENST00000554819 CST3P01034 146 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-214ENST00000554819 FOSL1P15407 271 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 TMEM201Q5SNT2 666 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 UBE3DQ7Z6J8 389 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 TOP6BLQ8N6T0 577 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 FBXO27Q8NI29 283 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 NKD1Q969G9 470 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 TJP2Q9UDY2 1190 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 PCDHGB7Q9Y5F8 929 aa6.66□□□□□ -1.34
SCFD1-214ENST00000554819 YARSP54577 528 aaKnown RBP6.65□□□□□ -1.34
SCFD1-214ENST00000554819 RACK1P63244 317 aaKnown RBP6.65□□□□□ -1.34
SCFD1-214ENST00000554819 NKG7Q16617 165 aa6.65□□□□□ -1.34
SCFD1-214ENST00000554819 NT5DC4Q86YG4 428 aa6.65□□□□□ -1.34
SCFD1-214ENST00000554819 TMEM87BQ96K49 555 aa6.65□□□□□ -1.34
SCFD1-214ENST00000554819 BRMS1Q9HCU9 246 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms