RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 MTX1Q13505 466 aa14.61□□□□□ -0.07
SRP54-203ENST00000553544 ZKSCAN2Q63HK3 967 aa14.61□□□□□ -0.07
SRP54-203ENST00000553544 PROCA1Q8NCQ7 364 aaPredicted RBP14.61□□□□□ -0.07
SRP54-203ENST00000553544 STXBP5LQ9Y2K9 1186 aa14.61□□□□□ -0.07
SRP54-203ENST00000553544 SPP2Q13103 211 aa14.6□□□□□ -0.07
SRP54-203ENST00000553544 TREML2Q5T2D2 321 aa14.6□□□□□ -0.07
SRP54-203ENST00000553544 SPTY2D1Q68D10 685 aaPredicted RBP14.6□□□□□ -0.07
SRP54-203ENST00000553544 DZIP1Q86YF9 867 aaKnown RBP14.6□□□□□ -0.07
SRP54-203ENST00000553544 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
SRP54-203ENST00000553544 SIL1Q9H173 461 aa14.6□□□□□ -0.07
SRP54-203ENST00000553544 C11orf49Q9H6J7 331 aa14.6□□□□□ -0.07
SRP54-203ENST00000553544 GJD2Q9UKL4 321 aa14.6□□□□□ -0.07
SRP54-203ENST00000553544 ZBTB22O15209 634 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 SLURP2P0DP57 97 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 SYN1P17600 705 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 IL15P40933 162 aaPredicted RBP14.59□□□□□ -0.07
SRP54-203ENST00000553544 PHKA1P46020 1223 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 PICALMQ13492 652 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 Q7L0L9 218 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 TDHQ8IZJ6 230 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 TMEM57Q8N5G2 664 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 ZNF280CQ8ND82 737 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 UBE2OQ9C0C9 1292 aaKnown RBP14.59□□□□□ -0.07
SRP54-203ENST00000553544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.59□□□□□ -0.07
SRP54-203ENST00000553544 ABCF2Q9UG63 623 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 PA2G4Q9UQ80 394 aaKnown RBP14.59□□□□□ -0.07
SRP54-203ENST00000553544 GAKO14976 1311 aa14.59□□□□□ -0.07
SRP54-203ENST00000553544 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
SRP54-203ENST00000553544 BTDP43251 543 aa14.58□□□□□ -0.08
SRP54-203ENST00000553544 MAGEA10P43363 369 aaPredicted RBP14.58□□□□□ -0.08
SRP54-203ENST00000553544 CCDC102BQ68D86 513 aa14.58□□□□□ -0.08
SRP54-203ENST00000553544 CCDC84Q86UT8 332 aaPredicted RBP14.58□□□□□ -0.08
SRP54-203ENST00000553544 OSBPL5Q9H0X9 879 aaPredicted RBP14.58□□□□□ -0.08
SRP54-203ENST00000553544 DDX4Q9NQI0 724 aaKnown RBP14.58□□□□□ -0.08
SRP54-203ENST00000553544 MTMR10Q9NXD2 777 aa14.58□□□□□ -0.08
SRP54-203ENST00000553544 OGDHLQ9ULD0 1010 aa14.58□□□□□ -0.08
SRP54-203ENST00000553544 MGAMO43451 1857 aa14.57□□□□□ -0.08
SRP54-203ENST00000553544 SRGAP3O43295 1099 aa14.57□□□□□ -0.08
SRP54-203ENST00000553544 GNAI2P04899 355 aa14.57□□□□□ -0.08
SRP54-203ENST00000553544 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.57□□□□□ -0.08
SRP54-203ENST00000553544 GPR75-ASB3A0A0A6YYF3 556 aa14.56□□□□□ -0.08
SRP54-203ENST00000553544 USP17L5A8MUK1 530 aa14.56□□□□□ -0.08
SRP54-203ENST00000553544 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
SRP54-203ENST00000553544 HMGCS2P54868 508 aa14.56□□□□□ -0.08
SRP54-203ENST00000553544 TRIM32Q13049 653 aa14.56□□□□□ -0.08
SRP54-203ENST00000553544 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
SRP54-203ENST00000553544 ASCC2Q9H1I8 757 aaPredicted RBP14.56□□□□□ -0.08
SRP54-203ENST00000553544 LDHCP07864 332 aa14.55□□□□□ -0.08
SRP54-203ENST00000553544 XRCC5P13010 732 aaKnown RBP14.55□□□□□ -0.08
SRP54-203ENST00000553544 CYP2B6P20813 491 aa14.55□□□□□ -0.08
SRP54-203ENST00000553544 CAP2P40123 477 aa14.55□□□□□ -0.08
SRP54-203ENST00000553544 TIMM10P62072 90 aa14.55□□□□□ -0.08
SRP54-203ENST00000553544 TRMT44Q8IYL2 757 aaKnown RBP14.55□□□□□ -0.08
SRP54-203ENST00000553544 NUDT12Q9BQG2 462 aa14.55□□□□□ -0.08
SRP54-203ENST00000553544 AS3MTQ9HBK9 375 aa14.55□□□□□ -0.08
SRP54-203ENST00000553544 DOCK3Q8IZD9 2030 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 PNMA6EA0A0J9YXQ4 647 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 RLBP1P12271 317 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 ADORA1P30542 326 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 RHBDL3P58872 404 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 GSTO1P78417 241 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 MECOMQ03112 1051 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 RASGRF1Q13972 1273 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 SH3D19Q5HYK7 790 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 MAP3K21Q5TCX8 1036 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 GPRC5AQ8NFJ5 357 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 TRIB2Q92519 343 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 MORF4L1Q9UBU8 362 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 MROH7-TTC4A0A0A0MT08 1334 aa14.54□□□□□ -0.08
SRP54-203ENST00000553544 PDS5AQ29RF7 1337 aaKnown RBP14.54□□□□□ -0.08
SRP54-203ENST00000553544 RFX7Q2KHR2 1363 aa14.53□□□□□ -0.08
SRP54-203ENST00000553544 FAM196BA6NMK8 535 aa14.53□□□□□ -0.08
SRP54-203ENST00000553544 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
SRP54-203ENST00000553544 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
SRP54-203ENST00000553544 P2RX7Q99572 595 aaKnown RBP14.53□□□□□ -0.08
SRP54-203ENST00000553544 TMOD4Q9NZQ9 345 aa14.53□□□□□ -0.08
SRP54-203ENST00000553544 AKAP2Q9Y2D5 859 aa14.53□□□□□ -0.08
SRP54-203ENST00000553544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.53□□□□□ -0.08
SRP54-203ENST00000553544 HOXA7P31268 230 aaPredicted RBP14.52□□□□□ -0.09
SRP54-203ENST00000553544 BACE1P56817 501 aa14.52□□□□□ -0.09
SRP54-203ENST00000553544 TFCP2Q12800 502 aa14.52□□□□□ -0.09
SRP54-203ENST00000553544 CCAR1Q8IX12 1150 aaKnown RBP14.52□□□□□ -0.09
SRP54-203ENST00000553544 SOCS4Q8WXH5 440 aa14.52□□□□□ -0.09
SRP54-203ENST00000553544 WDR18Q9BV38 432 aa14.52□□□□□ -0.09
SRP54-203ENST00000553544 HERC5Q9UII4 1024 aaKnown RBP14.52□□□□□ -0.09
SRP54-203ENST00000553544 MYH2Q9UKX2 1941 aa14.52□□□□□ -0.09
SRP54-203ENST00000553544 POTEB2H3BUK9 544 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 COL6A1P12109 1028 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 MAPK4P31152 587 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 ATP8B2P98198 1209 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 CACNB2Q08289 660 aaPredicted RBP14.51□□□□□ -0.09
SRP54-203ENST00000553544 POLA2Q14181 598 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 PDE3AQ14432 1141 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 MVPQ14764 893 aaKnown RBP14.51□□□□□ -0.09
SRP54-203ENST00000553544 FAM109BQ6ICB4 259 aaPredicted RBP14.51□□□□□ -0.09
SRP54-203ENST00000553544 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
SRP54-203ENST00000553544 SSH3Q8TE77 659 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 XAGE2Q96GT9 111 aa14.51□□□□□ -0.09
SRP54-203ENST00000553544 COL25A1Q9BXS0 654 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms