RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 DIXDC1Q155Q3 683 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 SLC15A2Q16348 729 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 RTN1Q16799 776 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 UVSSAQ2YD98 709 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 MICU3Q86XE3 530 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 CCDC144CPQ8IYA2 1237 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 ENAHQ8N8S7 591 aaPredicted RBP10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 WASF1Q92558 559 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 PHKBQ93100 1093 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 AIFM3Q96NN9 605 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 UBAC1Q9BSL1 405 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 ZC3H12CQ9C0D7 883 aaKnown RBP10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 GJB4Q9NTQ9 266 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 SUGT1Q9Y2Z0 365 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 CASZ1Q86V15 1759 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 TIAM2Q8IVF5 1701 aa10.92□□□□□ -0.66
MTHFD1-203ENST00000553391 GAKO14976 1311 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 TNKSO95271 1327 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 GOLGA6L4A6NEF3 574 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 KIF28PB7ZC32 967 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 RIMBP2O15034 1052 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 PRPF3O43395 683 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 PRDM1O75626 825 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 U2AF2P26368 475 aaKnown RBP eCLIP10.91□□□□□ -0.666e-8■□□□□ 9.9
MTHFD1-203ENST00000553391 NASPP49321 788 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 RHBDL3P58872 404 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 PDE4BQ07343 736 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 FUT2Q10981 343 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 TROAPQ12815 778 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 STYK1Q6J9G0 422 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 RBM43Q6ZSC3 357 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 SLF2Q8IX21 1173 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 LINC00301Q8NCQ3 95 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 SLC26A6Q9BXS9 759 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 TCP11L1Q9NUJ3 509 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 DDX19AQ9NUU7 478 aaKnown RBP10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 MCM9Q9NXL9 1143 aa10.91□□□□□ -0.66
MTHFD1-203ENST00000553391 DEXIO95424 95 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 YEATS4O95619 227 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 POLR3DP05423 398 aaPredicted RBP10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 CALM1P0DP23 149 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 CALM2P0DP24 149 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 CALM3P0DP25 149 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 PLCG2P16885 1265 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 GUCY1A2P33402 732 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 BTDP43251 543 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 USP5P45974 858 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 GTF2IP78347 998 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 EZH2Q15910 746 aaKnown RBP10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 CCDC178Q5BJE1 867 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 ADALQ6DHV7 355 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 RCSD1Q6JBY9 416 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 CATIPQ7Z7H3 387 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 DGKHQ86XP1 1220 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 ENGASEQ8NFI3 743 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 TGFBRAP1Q8WUH2 860 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 NOL10Q9BSC4 688 aaKnown RBP10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 MRIQ9BWK5 157 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 CLSTN2Q9H4D0 955 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 POLR3EQ9NVU0 708 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 PCDHA7Q9UN72 937 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 CLIC4Q9Y696 253 aa10.9□□□□□ -0.66
MTHFD1-203ENST00000553391 A0A1W2PQ27 194 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 A0A1W2PQ64 194 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 A0A1W2PQD8 194 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 H0YIN7 160 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 UBE2Q2LH0YL09 131 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 DDAH1O94760 285 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 PLCD1P51178 756 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 CEBPZQ03701 1054 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 EN1Q05925 392 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 SLC39A14Q15043 492 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 PKN1Q16512 942 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 FAM47AQ5JRC9 791 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 MFSD14BQ5SR56 506 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 IFIT1BQ5T764 474 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 ANO1Q5XXA6 986 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 OLFM4Q6UX06 510 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 DPP8Q6V1X1 898 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 CCAR1Q8IX12 1150 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 NUP133Q8WUM0 1156 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 C7orf43Q8WVR3 580 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 MAP3K14Q99558 947 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 RNF26Q9BY78 433 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 FTOQ9C0B1 505 aaKnown RBP eCLIP10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 IL17RBQ9NRM6 502 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 RBM28Q9NW13 759 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 STK32BQ9NY57 414 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 DACT1Q9NYF0 836 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 NRXN2Q9P2S2 1712 aa10.89□□□□□ -0.67
MTHFD1-203ENST00000553391 FKBP1AP62942 108 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 TFAP4Q01664 338 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 CCDC173Q0VFZ6 552 aa10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 SNW1Q13573 536 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-203ENST00000553391 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms