RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 EAF2Q96CJ1 260 aaPredicted RBP20.25■□□□□ 0.83
XRCC3-204ENST00000553361 DBNLQ9UJU6 430 aaKnown RBP20.25■□□□□ 0.83
XRCC3-204ENST00000553361 ZBED9Q6R2W3 1325 aa20.25■□□□□ 0.83
XRCC3-204ENST00000553361 RRP1BQ14684 758 aaKnown RBP20.24■□□□□ 0.83
XRCC3-204ENST00000553361 MAPKAPK5Q8IW41 473 aa20.24■□□□□ 0.83
XRCC3-204ENST00000553361 TGFBRAP1Q8WUH2 860 aa20.24■□□□□ 0.83
XRCC3-204ENST00000553361 ZNF512BQ96KM6 892 aaPredicted RBP20.24■□□□□ 0.83
XRCC3-204ENST00000553361 PIH1D3Q9NQM4 214 aaKnown RBP20.24■□□□□ 0.83
XRCC3-204ENST00000553361 MYPNQ86TC9 1320 aa20.24■□□□□ 0.83
XRCC3-204ENST00000553361 PLCG2P16885 1265 aa20.23■□□□□ 0.83
XRCC3-204ENST00000553361 FCGRTP55899 365 aa20.23■□□□□ 0.83
XRCC3-204ENST00000553361 PPP4CP60510 307 aa20.23■□□□□ 0.83
XRCC3-204ENST00000553361 SPP2Q13103 211 aa20.23■□□□□ 0.83
XRCC3-204ENST00000553361 ADGRA1Q86SQ6 560 aa20.23■□□□□ 0.83
XRCC3-204ENST00000553361 SMCR8Q8TEV9 937 aaPredicted RBP20.23■□□□□ 0.83
XRCC3-204ENST00000553361 PI4KBQ9UBF8 816 aa20.23■□□□□ 0.83
XRCC3-204ENST00000553361 EXOC6BQ9Y2D4 811 aa20.23■□□□□ 0.83
XRCC3-204ENST00000553361 CAP2P40123 477 aa20.22■□□□□ 0.83
XRCC3-204ENST00000553361 TREML2Q5T2D2 321 aa20.22■□□□□ 0.83
XRCC3-204ENST00000553361 ZNF280CQ8ND82 737 aa20.22■□□□□ 0.83
XRCC3-204ENST00000553361 SLC45A1Q9Y2W3 748 aa20.22■□□□□ 0.83
XRCC3-204ENST00000553361 IDH1O75874 414 aaKnown RBP20.21■□□□□ 0.83
XRCC3-204ENST00000553361 CYP7A1P22680 504 aa20.21■□□□□ 0.83
XRCC3-204ENST00000553361 GRK4P32298 578 aa20.21■□□□□ 0.83
XRCC3-204ENST00000553361 DYNLL1P63167 89 aaKnown RBP20.21■□□□□ 0.83
XRCC3-204ENST00000553361 PRKCZQ05513 592 aa20.21■□□□□ 0.83
XRCC3-204ENST00000553361 MTFR1Q15390 333 aa20.21■□□□□ 0.83
XRCC3-204ENST00000553361 DHX36Q9H2U1 1008 aaKnown RBP20.21■□□□□ 0.83
XRCC3-204ENST00000553361 BIN2Q9UBW5 565 aaPredicted RBP20.21■□□□□ 0.83
XRCC3-204ENST00000553361 HERC5Q9UII4 1024 aaKnown RBP20.21■□□□□ 0.83
XRCC3-204ENST00000553361 AGTPBP1Q9UPW5 1226 aa20.21■□□□□ 0.83
XRCC3-204ENST00000553361 NDUFB9Q9Y6M9 179 aa20.21■□□□□ 0.83
XRCC3-204ENST00000553361 USP17L5A8MUK1 530 aa20.2■□□□□ 0.82
XRCC3-204ENST00000553361 AACSQ86V21 672 aa20.2■□□□□ 0.82
XRCC3-204ENST00000553361 SAP30BPQ9UHR5 308 aaKnown RBP20.2■□□□□ 0.82
XRCC3-204ENST00000553361 PALD1Q9ULE6 856 aa20.2■□□□□ 0.82
XRCC3-204ENST00000553361 GABRQQ9UN88 632 aa20.2■□□□□ 0.82
XRCC3-204ENST00000553361 HMGCS2P54868 508 aa20.19■□□□□ 0.82
XRCC3-204ENST00000553361 ERC1Q8IUD2 1116 aa20.19■□□□□ 0.82
XRCC3-204ENST00000553361 CRACR2BQ8N4Y2 399 aaPredicted RBP20.19■□□□□ 0.82
XRCC3-204ENST00000553361 MIGA1Q8NAN2 632 aa20.19■□□□□ 0.82
XRCC3-204ENST00000553361 TRIM34Q9BYJ4 488 aa20.19■□□□□ 0.82
XRCC3-204ENST00000553361 BCL11AQ9H165 835 aa20.19■□□□□ 0.82
XRCC3-204ENST00000553361 FLT1P17948 1338 aa20.19■□□□□ 0.82
XRCC3-204ENST00000553361 FOXP4Q8IVH2 680 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-204ENST00000553361 ANKRD13CQ8N6S4 541 aa20.18■□□□□ 0.82
XRCC3-204ENST00000553361 MAGEB6Q8N7X4 407 aa20.18■□□□□ 0.82
XRCC3-204ENST00000553361 PROCA1Q8NCQ7 364 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-204ENST00000553361 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
XRCC3-204ENST00000553361 COL2A1P02458 1487 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-204ENST00000553361 APBB1O00213 710 aa20.17■□□□□ 0.82
XRCC3-204ENST00000553361 MS4A1P11836 297 aa20.17■□□□□ 0.82
XRCC3-204ENST00000553361 TBC1D2Q9BYX2 928 aa20.17■□□□□ 0.82
XRCC3-204ENST00000553361 ANTXR1Q9H6X2 564 aa20.17■□□□□ 0.82
XRCC3-204ENST00000553361 AS3MTQ9HBK9 375 aa20.17■□□□□ 0.82
XRCC3-204ENST00000553361 PNMA3Q9UL41 463 aa20.17■□□□□ 0.82
XRCC3-204ENST00000553361 ZSWIM8A7E2V4 1837 aa20.17■□□□□ 0.82
XRCC3-204ENST00000553361 DOCK2Q92608 1830 aa20.17■□□□□ 0.82
XRCC3-204ENST00000553361 TNPO2O14787 897 aaKnown RBP20.16■□□□□ 0.82
XRCC3-204ENST00000553361 IGSF3O75054 1194 aa20.16■□□□□ 0.82
XRCC3-204ENST00000553361 FLT3LGP49771 235 aa20.16■□□□□ 0.82
XRCC3-204ENST00000553361 UBXN2AP68543 259 aa20.16■□□□□ 0.82
XRCC3-204ENST00000553361 JAG1P78504 1218 aa20.16■□□□□ 0.82
XRCC3-204ENST00000553361 HSP90AB4PQ58FF6 505 aa20.16■□□□□ 0.82
XRCC3-204ENST00000553361 DNAJC18Q9H819 358 aa20.16■□□□□ 0.82
XRCC3-204ENST00000553361 COG6Q9Y2V7 657 aa20.16■□□□□ 0.82
XRCC3-204ENST00000553361 GDF11O95390 407 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 HLA-DOAP06340 250 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 ASNSP08243 561 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 CCL5P13501 91 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 USP5P45974 858 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 MAP3K12Q12852 859 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.823e-7■■■■■ 28.7
XRCC3-204ENST00000553361 SHROOM1Q2M3G4 852 aaPredicted RBP20.15■□□□□ 0.82
XRCC3-204ENST00000553361 RHPN1Q8TCX5 695 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 RNF208Q9H0X6 261 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 TAOK2Q9UL54 1235 aa20.15■□□□□ 0.82
XRCC3-204ENST00000553361 ADCY3O60266 1144 aa20.14■□□□□ 0.81
XRCC3-204ENST00000553361 MTMR2Q13614 643 aa20.14■□□□□ 0.81
XRCC3-204ENST00000553361 SH3D19Q5HYK7 790 aa20.14■□□□□ 0.81
XRCC3-204ENST00000553361 METTL16Q86W50 562 aaKnown RBP20.14■□□□□ 0.81
XRCC3-204ENST00000553361 SLAIN1Q8ND83 568 aa20.14■□□□□ 0.81
XRCC3-204ENST00000553361 WDR18Q9BV38 432 aa20.14■□□□□ 0.81
XRCC3-204ENST00000553361 ASCC2Q9H1I8 757 aaPredicted RBP20.14■□□□□ 0.81
XRCC3-204ENST00000553361 ELNP15502 786 aa20.13■□□□□ 0.81
XRCC3-204ENST00000553361 BACE1P56817 501 aa20.13■□□□□ 0.81
XRCC3-204ENST00000553361 FAM110CQ1W6H9 321 aa20.13■□□□□ 0.81
XRCC3-204ENST00000553361 RPAP2Q8IXW5 612 aaPredicted RBP20.13■□□□□ 0.81
XRCC3-204ENST00000553361 COA7Q96BR5 231 aa20.13■□□□□ 0.81
XRCC3-204ENST00000553361 GCC1Q96CN9 775 aa20.13■□□□□ 0.81
XRCC3-204ENST00000553361 TMOD4Q9NZQ9 345 aa20.13■□□□□ 0.81
XRCC3-204ENST00000553361 GJB1P08034 283 aa20.12■□□□□ 0.81
XRCC3-204ENST00000553361 GCLCP48506 637 aaPredicted RBP20.12■□□□□ 0.81
XRCC3-204ENST00000553361 CLASRPQ8N2M8 674 aaKnown RBP20.12■□□□□ 0.81
XRCC3-204ENST00000553361 NKX2-3Q8TAU0 364 aa20.12■□□□□ 0.81
XRCC3-204ENST00000553361 SHISA4Q96DD7 197 aa20.12■□□□□ 0.81
XRCC3-204ENST00000553361 DDX19BQ9UMR2 479 aa20.12■□□□□ 0.81
XRCC3-204ENST00000553361 USP17L10C9JJH3 530 aa20.11■□□□□ 0.81
XRCC3-204ENST00000553361 HMMRO75330 724 aa20.11■□□□□ 0.81
XRCC3-204ENST00000553361 CERS3Q8IU89 383 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms