RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 NUDT16Q96DE0 195 aaKnown RBP5.73□□□□□ -1.49
PFDN5-219ENST00000553171 POM121Q96HA1 1249 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 TACO1Q9BSH4 297 aaKnown RBP5.73□□□□□ -1.49
PFDN5-219ENST00000553171 TBC1D2Q9BYX2 928 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 NLRP2Q9NX02 1062 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 ETAA1Q9NY74 926 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 TMOD4Q9NZQ9 345 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 COL4A3BPQ9Y5P4 624 aa5.73□□□□□ -1.49
PFDN5-219ENST00000553171 RGPD5Q99666 1765 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 SCN11AQ9UI33 1791 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 DOT1LQ8TEK3 1739 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 CHL1O00533 1208 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 ZBTB7BO15156 539 aaPredicted RBP5.72□□□□□ -1.49
PFDN5-219ENST00000553171 KINO60870 393 aaKnown RBP5.72□□□□□ -1.49
PFDN5-219ENST00000553171 FAM163BP0C2L3 166 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 VAMP1P23763 118 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 RIPK4P57078 832 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 NLRP6P59044 892 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 TAF7Q15545 349 aaPredicted RBP5.72□□□□□ -1.49
PFDN5-219ENST00000553171 PDCD2Q16342 344 aaPredicted RBP5.72□□□□□ -1.49
PFDN5-219ENST00000553171 WWC2Q6AWC2 1192 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 FAM109BQ6ICB4 259 aaPredicted RBP5.72□□□□□ -1.49
PFDN5-219ENST00000553171 RGMBQ6NW40 437 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 TRIM74Q86UV6 250 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 TRIM73Q86UV7 250 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 MORC1Q86VD1 984 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 KIAA1958Q8N8K9 716 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 TAF4BQ92750 862 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 CENPTQ96BT3 561 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 DDX27Q96GQ7 796 aaKnown RBP5.72□□□□□ -1.49
PFDN5-219ENST00000553171 GUCD1Q96NT3 240 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 TAOK3Q9H2K8 898 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 DHX36Q9H2U1 1008 aaKnown RBP5.72□□□□□ -1.49
PFDN5-219ENST00000553171 MRS2Q9HD23 443 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.72□□□□□ -1.49
PFDN5-219ENST00000553171 COMMD8Q9NX08 183 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 ZNF541Q9H0D2 1346 aa5.72□□□□□ -1.49
PFDN5-219ENST00000553171 FER1L6Q2WGJ9 1857 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 GPR25O00155 361 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 CAND2O75155 1236 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 E2F6O75461 281 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 OFD1O75665 1012 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 CDKL5O76039 1030 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 FOSP01100 380 aaPredicted RBP5.71□□□□□ -1.5
PFDN5-219ENST00000553171 RBP3P10745 1247 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 IMPDH2P12268 514 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 PIK3CAP42336 1068 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 GSCP56915 257 aaPredicted RBP5.71□□□□□ -1.5
PFDN5-219ENST00000553171 HUNKP57058 714 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 DDR1Q08345 913 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 PTK7Q13308 1070 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 SEPT7Q16181 437 aaKnown RBP5.71□□□□□ -1.5
PFDN5-219ENST00000553171 MAP3K11Q16584 847 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 CCDC144BQ3MJ40 725 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 PARP10Q53GL7 1025 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 CCDC158Q5M9N0 1113 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 BICDL1Q6ZP65 573 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 SKAP1Q86WV1 359 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 RELL1Q8IUW5 271 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 RBM12BQ8IXT5 1001 aaKnown RBP5.71□□□□□ -1.5
PFDN5-219ENST00000553171 SAMD14Q8IZD0 417 aaPredicted RBP5.71□□□□□ -1.5
PFDN5-219ENST00000553171 TMC2Q8TDI7 906 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 GIPC2Q8TF65 315 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 ATRIPQ8WXE1 791 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 VMP1Q96GC9 406 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 RNPC3Q96LT9 517 aaKnown RBP5.71□□□□□ -1.5
PFDN5-219ENST00000553171 MPHOSPH9Q99550 1183 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 MAP3K14Q99558 947 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 TRIM6Q9C030 488 aaPredicted RBP5.71□□□□□ -1.5
PFDN5-219ENST00000553171 IRAK4Q9NWZ3 460 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 ITM2BQ9Y287 266 aa5.71□□□□□ -1.5
PFDN5-219ENST00000553171 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.71□□□□□ -1.5
PFDN5-219ENST00000553171 FAM25EA8MYX2 175 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 SEMA3EO15041 775 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 TBC1D12O60347 775 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 KRT37O76014 449 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 KIAA0754O94854 1291 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 LDHAP00338 332 aaKnown RBP5.7□□□□□ -1.5
PFDN5-219ENST00000553171 HNRNPCP07910 306 aaKnown RBP eCLIP5.7□□□□□ -1.5
PFDN5-219ENST00000553171 HOXD10P28358 340 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 ALDH1B1P30837 517 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 BMP8BP34820 402 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 ATP6V1AP38606 617 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 USP5P45974 858 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 ADCY2Q08462 1091 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 SEPT2Q15019 361 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 TCEAL1Q15170 157 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 LONRF1Q17RB8 773 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 MAP9Q49MG5 647 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 USP50Q70EL3 339 aaPredicted RBP5.7□□□□□ -1.5
PFDN5-219ENST00000553171 ZNF771Q7L3S4 317 aaPredicted RBP5.7□□□□□ -1.5
PFDN5-219ENST00000553171 CHPFQ8IZ52 775 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 STK11IPQ8N1F8 1099 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 ARL6IP6Q8N6S5 226 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 PDCD7Q8N8D1 485 aaKnown RBP5.7□□□□□ -1.5
PFDN5-219ENST00000553171 ZBTB9Q96C00 473 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 UIMC1Q96RL1 719 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 LRFN3Q9BTN0 628 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 UNC45AQ9H3U1 944 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 C14orf93Q9H972 538 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms