RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
RAB5B-210ENST00000553116 LAMB1P07942 1786 aa9.65□□□□□ -0.87
RAB5B-210ENST00000553116 DUOX1Q9NRD9 1551 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 TSPY2A6NKD2 308 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 IARSP41252 1262 aaKnown RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 CEBPZQ03701 1054 aaKnown RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 RTN1Q16799 776 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 ZSCAN23Q3MJ62 389 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 IFIT1BQ5T764 474 aaKnown RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 SPATA32Q96LK8 384 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 DBNDD1Q9H9R9 158 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 SAP30BPQ9UHR5 308 aaKnown RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 PLCG2P16885 1265 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 UBE2HP62256 183 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 CCDC82Q8N4S0 544 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 SLC26A6Q9BXS9 759 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 SCAND2PQ9GZW5 306 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 NAV1Q8NEY1 1877 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 KIAA1551Q9HCM1 1747 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 IGSF3O75054 1194 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 PCP11498 1178 aaKnown RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 TRIM29Q14134 588 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 FAM47AQ5JRC9 791 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 OTUD7BQ6GQQ9 843 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 STYK1Q6J9G0 422 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 CERS3Q8IU89 383 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 ZNF654Q8IZM8 581 aa9.64□□□□□ -0.87
RAB5B-210ENST00000553116 ZSCAN10Q96SZ4 725 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 PDGFDQ9GZP0 370 aaPredicted RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
RAB5B-210ENST00000553116 CDC27P30260 824 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 EVX2Q03828 476 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 RESTQ13127 1097 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 TMEM87AQ8NBN3 555 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 ALG1Q9BT22 464 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 RTFDC1Q9BY42 306 aaPredicted RBP9.63□□□□□ -0.87
RAB5B-210ENST00000553116 LTBP1Q14766 1721 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 CCDC196A0A1B0GTZ2 297 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 SYCE3A1L190 88 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 FDPSP14324 419 aaKnown RBP9.63□□□□□ -0.87
RAB5B-210ENST00000553116 SSRP1Q08945 709 aaKnown RBP9.63□□□□□ -0.87
RAB5B-210ENST00000553116 CATIPQ7Z7H3 387 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 TMEM63CQ9P1W3 806 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 CFAP45Q9UL16 551 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 SLX4Q8IY92 1834 aa9.63□□□□□ -0.87
RAB5B-210ENST00000553116 AKAP17AQ02040 695 aaKnown RBP9.62□□□□□ -0.87
RAB5B-210ENST00000553116 PICALMQ13492 652 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 MXD3Q9BW11 206 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 FAM205AQ6ZU69 1335 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 SCNN1DP51172 638 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 SBK1Q52WX2 424 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 TTC6Q86TZ1 520 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
RAB5B-210ENST00000553116 BICD2Q8TD16 824 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 DYNLL2Q96FJ2 89 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 ZNF396Q96N95 335 aaPredicted RBP9.62□□□□□ -0.87
RAB5B-210ENST00000553116 MTA3Q9BTC8 594 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 PPP4CP60510 307 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 ZNF444Q8N0Y2 327 aaPredicted RBP9.62□□□□□ -0.87
RAB5B-210ENST00000553116 GJB4Q9NTQ9 266 aa9.62□□□□□ -0.87
RAB5B-210ENST00000553116 GPR75-ASB3A0A0A6YYF3 556 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 TSPY3P0CV98 308 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 TSPY8P0CW00 308 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 RBM5P52756 815 aaKnown RBP eCLIP9.61□□□□□ -0.87
RAB5B-210ENST00000553116 GLIPR1L2Q4G1C9 344 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 C12orf60Q5U649 245 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 CMTR1Q8N1G2 835 aaKnown RBP9.61□□□□□ -0.87
RAB5B-210ENST00000553116 FBXO18Q8NFZ0 1043 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 AIFM3Q96NN9 605 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 GRPEL1Q9HAV7 217 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 MYH15Q9Y2K3 1946 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 C21orf2O43822 256 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 ORC4O43929 436 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 NMT2O60551 498 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 MRE11P49959 708 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 TFAP4Q01664 338 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 FANCBQ8NB91 859 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 LEO1Q8WVC0 666 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-210ENST00000553116 WASF1Q92558 559 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 ZNF287Q9HBT7 754 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 ISY1Q9ULR0 285 aaKnown RBP9.61□□□□□ -0.87
RAB5B-210ENST00000553116 MTMR7Q9Y216 660 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 DAGLAQ9Y4D2 1042 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 QSER1Q2KHR3 1735 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 MYH6P13533 1939 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 ECE2O60344 883 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 PODNQ7Z5L7 613 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.61□□□□□ -0.87
RAB5B-210ENST00000553116 MYH1P12882 1939 aa9.61□□□□□ -0.87
RAB5B-210ENST00000553116 FLT1P17948 1338 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 SEC23AQ15436 765 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 AOC3Q16853 763 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 KIAA0825Q8IV33 1275 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 SLC44A5Q8NCS7 719 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 CTCFLQ8NI51 663 aaPredicted RBP9.6□□□□□ -0.87
RAB5B-210ENST00000553116 PPP1R1BQ9UD71 204 aaPredicted RBP9.6□□□□□ -0.87
RAB5B-210ENST00000553116 SUGT1Q9Y2Z0 365 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms