RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CAP2P40123 477 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 ZAP70P43403 619 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 FLT3LGP49771 235 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 ADGRA1Q86SQ6 560 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 MAPKAPK5Q8IW41 473 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 TGFBRAP1Q8WUH2 860 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 SHISA4Q96DD7 197 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 RNF208Q9H0X6 261 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 GPR108Q9NPR9 543 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 TLR7Q9NYK1 1049 aaKnown RBP14.08□□□□□ -0.16
NEK3-204ENST00000552973 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 AGTPBP1Q9UPW5 1226 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 SLC45A1Q9Y2W3 748 aa14.08□□□□□ -0.16
NEK3-204ENST00000552973 AK9Q5TCS8 1911 aa14.07□□□□□ -0.16
NEK3-204ENST00000552973 HTTP42858 3142 aa14.07□□□□□ -0.16
NEK3-204ENST00000552973 TNPO2O14787 897 aaKnown RBP14.07□□□□□ -0.16
NEK3-204ENST00000552973 ZBTB7BO15156 539 aaPredicted RBP14.07□□□□□ -0.16
NEK3-204ENST00000552973 BAG3O95817 575 aa14.07□□□□□ -0.16
NEK3-204ENST00000552973 MAP4K4O95819 1239 aaPredicted RBP14.07□□□□□ -0.16
NEK3-204ENST00000552973 ELNP15502 786 aa14.07□□□□□ -0.16
NEK3-204ENST00000552973 HMGCS2P54868 508 aa14.07□□□□□ -0.16
NEK3-204ENST00000552973 UBXN2AP68543 259 aa14.07□□□□□ -0.16
NEK3-204ENST00000552973 ZNF280CQ8ND82 737 aa14.07□□□□□ -0.16
NEK3-204ENST00000552973 PIH1D3Q9NQM4 214 aaKnown RBP14.07□□□□□ -0.16
NEK3-204ENST00000552973 MYH2Q9UKX2 1941 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 H0YGN5 161 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 ADCY3O60266 1144 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 DYNLL1P63167 89 aaKnown RBP14.06□□□□□ -0.16
NEK3-204ENST00000552973 JAG1P78504 1218 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 SLAIN1Q8ND83 568 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 DPF3Q92784 378 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 EAF2Q96CJ1 260 aaPredicted RBP14.06□□□□□ -0.16
NEK3-204ENST00000552973 UNC93B1Q9H1C4 597 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 PI4KBQ9UBF8 816 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
NEK3-204ENST00000552973 DBNLQ9UJU6 430 aaKnown RBP14.06□□□□□ -0.16
NEK3-204ENST00000552973 NDUFB9Q9Y6M9 179 aa14.06□□□□□ -0.16
NEK3-204ENST00000552973 USP17L5A8MUK1 530 aa14.05□□□□□ -0.16
NEK3-204ENST00000552973 GJB1P08034 283 aa14.05□□□□□ -0.16
NEK3-204ENST00000552973 GJA8P48165 433 aa14.05□□□□□ -0.16
NEK3-204ENST00000552973 PPP4CP60510 307 aa14.05□□□□□ -0.16
NEK3-204ENST00000552973 SHROOM1Q2M3G4 852 aaPredicted RBP14.05□□□□□ -0.16
NEK3-204ENST00000552973 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
NEK3-204ENST00000552973 PCDH10Q9P2E7 1040 aa14.05□□□□□ -0.16
NEK3-204ENST00000552973 HERC5Q9UII4 1024 aaKnown RBP14.05□□□□□ -0.16
NEK3-204ENST00000552973 PNMA3Q9UL41 463 aa14.05□□□□□ -0.16
NEK3-204ENST00000552973 PALD1Q9ULE6 856 aa14.05□□□□□ -0.16
NEK3-204ENST00000552973 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
NEK3-204ENST00000552973 NOP58Q9Y2X3 529 aaKnown RBP14.05□□□□□ -0.16
NEK3-204ENST00000552973 PEX10O60683 326 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 IDH1O75874 414 aaKnown RBP14.04□□□□□ -0.16
NEK3-204ENST00000552973 GDF11O95390 407 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 INHAP05111 366 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 PLCG2P16885 1265 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 CYP7A1P22680 504 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
NEK3-204ENST00000552973 MIGA1Q8NAN2 632 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 NKX2-3Q8TAU0 364 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 U2AF1L4Q8WU68 220 aaKnown RBP14.04□□□□□ -0.16
NEK3-204ENST00000552973 COA7Q96BR5 231 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 TRIM34Q9BYJ4 488 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 DHX36Q9H2U1 1008 aaKnown RBP14.04□□□□□ -0.16
NEK3-204ENST00000552973 DNAJC18Q9H819 358 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 AS3MTQ9HBK9 375 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 FLT1P17948 1338 aa14.04□□□□□ -0.16
NEK3-204ENST00000552973 MTMR2Q13614 643 aa14.03□□□□□ -0.16
NEK3-204ENST00000552973 FAM110CQ1W6H9 321 aa14.03□□□□□ -0.16
NEK3-204ENST00000552973 CEP85Q6P2H3 762 aa14.03□□□□□ -0.16
NEK3-204ENST00000552973 FOXP4Q8IVH2 680 aaPredicted RBP14.03□□□□□ -0.16
NEK3-204ENST00000552973 ZNF512BQ96KM6 892 aaPredicted RBP14.03□□□□□ -0.16
NEK3-204ENST00000552973 BCL11AQ9H165 835 aa14.03□□□□□ -0.16
NEK3-204ENST00000552973 ASCC2Q9H1I8 757 aaPredicted RBP14.03□□□□□ -0.16
NEK3-204ENST00000552973 ANTXR1Q9H6X2 564 aa14.03□□□□□ -0.16
NEK3-204ENST00000552973 EXOC6BQ9Y2D4 811 aa14.03□□□□□ -0.16
NEK3-204ENST00000552973 DOCK2Q92608 1830 aa14.03□□□□□ -0.16
NEK3-204ENST00000552973 KIAA0100Q14667 2235 aaKnown RBP14.03□□□□□ -0.16
NEK3-204ENST00000552973 COL2A1P02458 1487 aaPredicted RBP14.02□□□□□ -0.16
NEK3-204ENST00000552973 SGPL1O95470 568 aa14.02□□□□□ -0.17
NEK3-204ENST00000552973 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.17
NEK3-204ENST00000552973 SH3D19Q5HYK7 790 aa14.02□□□□□ -0.17
NEK3-204ENST00000552973 DIEXFQ68CQ4 756 aaKnown RBP14.02□□□□□ -0.17
NEK3-204ENST00000552973 MAGEB6Q8N7X4 407 aa14.02□□□□□ -0.17
NEK3-204ENST00000552973 PXYLP1Q8TE99 480 aa14.02□□□□□ -0.17
NEK3-204ENST00000552973 DEFB118Q96PH6 123 aa14.02□□□□□ -0.17
NEK3-204ENST00000552973 TBC1D2Q9BYX2 928 aa14.02□□□□□ -0.17
NEK3-204ENST00000552973 CENPFP49454 3210 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 TFRCP02786 760 aaKnown RBP14.01□□□□□ -0.17
NEK3-204ENST00000552973 ASNSP08243 561 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 USP5P45974 858 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
NEK3-204ENST00000552973 BACE1P56817 501 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 IRF5Q13568 498 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 AACSQ86V21 672 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 P2RX7Q99572 595 aaKnown RBP14.01□□□□□ -0.17
NEK3-204ENST00000552973 WDR18Q9BV38 432 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 IL1RAPL2Q9NP60 686 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
NEK3-204ENST00000552973 RBBP6Q7Z6E9 1792 aaKnown RBP14.01□□□□□ -0.17
NEK3-204ENST00000552973 APBB1O00213 710 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 270.1 ms