RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
SUPT16H-202ENST00000552829 TRIM75PA6NK02 468 aa14.28□□□□□ -0.12
SUPT16H-202ENST00000552829 IFIT1P09914 478 aaKnown RBP14.28□□□□□ -0.12
SUPT16H-202ENST00000552829 PUM3Q15397 648 aaKnown RBP14.28□□□□□ -0.12
SUPT16H-202ENST00000552829 LRRC26Q2I0M4 334 aa14.28□□□□□ -0.12
SUPT16H-202ENST00000552829 PROCA1Q8NCQ7 364 aaPredicted RBP14.28□□□□□ -0.12
SUPT16H-202ENST00000552829 SRCIN1Q9C0H9 1055 aa14.28□□□□□ -0.12
SUPT16H-202ENST00000552829 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.28□□□□□ -0.12
SUPT16H-202ENST00000552829 PNMA3Q9UL41 463 aa14.28□□□□□ -0.12
SUPT16H-202ENST00000552829 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.13
SUPT16H-202ENST00000552829 XRCC5P13010 732 aaKnown RBP14.27□□□□□ -0.13
SUPT16H-202ENST00000552829 MDM2Q00987 491 aaPredicted RBP14.27□□□□□ -0.13
SUPT16H-202ENST00000552829 LHX8Q68G74 356 aa14.27□□□□□ -0.13
SUPT16H-202ENST00000552829 CCDC84Q86UT8 332 aaPredicted RBP14.27□□□□□ -0.13
SUPT16H-202ENST00000552829 MORF4L1Q9UBU8 362 aa14.27□□□□□ -0.13
SUPT16H-202ENST00000552829 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.13
SUPT16H-202ENST00000552829 NCOR1O75376 2440 aa14.26□□□□□ -0.13
SUPT16H-202ENST00000552829 GAKO14976 1311 aa14.26□□□□□ -0.13
SUPT16H-202ENST00000552829 SALL1Q9NSC2 1324 aa14.26□□□□□ -0.13
SUPT16H-202ENST00000552829 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
SUPT16H-202ENST00000552829 EXOSC9Q06265 439 aaKnown RBP14.26□□□□□ -0.13
SUPT16H-202ENST00000552829 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
SUPT16H-202ENST00000552829 CDX2Q99626 313 aaPredicted RBP14.26□□□□□ -0.13
SUPT16H-202ENST00000552829 FRMPD3Q5JV73 1810 aa14.26□□□□□ -0.13
SUPT16H-202ENST00000552829 ATAD5Q96QE3 1844 aa14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 MAST2Q6P0Q8 1798 aa14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 TBC1D12O60347 775 aa14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 LDHBP07195 334 aaKnown RBP14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 USP6NLQ92738 828 aa14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 FAM161BQ96MY7 647 aa14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 ASCC2Q9H1I8 757 aaPredicted RBP14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 DDX4Q9NQI0 724 aaKnown RBP14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 LTBP2Q14767 1821 aa14.25□□□□□ -0.13
SUPT16H-202ENST00000552829 CYP2B6P20813 491 aa14.24□□□□□ -0.13
SUPT16H-202ENST00000552829 CACNB2Q08289 660 aaPredicted RBP14.24□□□□□ -0.13
SUPT16H-202ENST00000552829 SH3D19Q5HYK7 790 aa14.24□□□□□ -0.13
SUPT16H-202ENST00000552829 SLC4A10Q6U841 1118 aa14.24□□□□□ -0.13
SUPT16H-202ENST00000552829 MAFAQ8NHW3 353 aaPredicted RBP14.24□□□□□ -0.13
SUPT16H-202ENST00000552829 LPIN2Q92539 896 aa14.24□□□□□ -0.13
SUPT16H-202ENST00000552829 FAM163AQ96GL9 167 aaPredicted RBP14.24□□□□□ -0.13
SUPT16H-202ENST00000552829 SEMA6BQ9H3T3 888 aa14.24□□□□□ -0.13
SUPT16H-202ENST00000552829 MUC3AQ02505 3323 aa14.23□□□□□ -0.13
SUPT16H-202ENST00000552829 SLC5A1P13866 664 aa14.23□□□□□ -0.13
SUPT16H-202ENST00000552829 RFX5P48382 616 aaPredicted RBP14.23□□□□□ -0.13
SUPT16H-202ENST00000552829 SPP2Q13103 211 aa14.23□□□□□ -0.13
SUPT16H-202ENST00000552829 ZNF697Q5TEC3 545 aa14.23□□□□□ -0.13
SUPT16H-202ENST00000552829 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
SUPT16H-202ENST00000552829 TRMT44Q8IYL2 757 aaKnown RBP14.23□□□□□ -0.13
SUPT16H-202ENST00000552829 ZNF280CQ8ND82 737 aa14.23□□□□□ -0.13
SUPT16H-202ENST00000552829 EYA2O00167 538 aa14.22□□□□□ -0.13
SUPT16H-202ENST00000552829 PABPC4Q13310 644 aaKnown RBP eCLIP14.22□□□□□ -0.13
SUPT16H-202ENST00000552829 POLA2Q14181 598 aa14.22□□□□□ -0.13
SUPT16H-202ENST00000552829 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
SUPT16H-202ENST00000552829 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
SUPT16H-202ENST00000552829 NUDT12Q9BQG2 462 aa14.22□□□□□ -0.13
SUPT16H-202ENST00000552829 TBC1D2Q9BYX2 928 aa14.22□□□□□ -0.13
SUPT16H-202ENST00000552829 OSBPL5Q9H0X9 879 aaPredicted RBP14.22□□□□□ -0.13
SUPT16H-202ENST00000552829 ANP32CO43423 234 aa14.21□□□□□ -0.13
SUPT16H-202ENST00000552829 CCND3P30281 292 aaPredicted RBP14.21□□□□□ -0.13
SUPT16H-202ENST00000552829 HMGCS2P54868 508 aa14.21□□□□□ -0.13
SUPT16H-202ENST00000552829 RRP1BQ14684 758 aaKnown RBP14.21□□□□□ -0.13
SUPT16H-202ENST00000552829 SOCS4Q8WXH5 440 aa14.21□□□□□ -0.13
SUPT16H-202ENST00000552829 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
SUPT16H-202ENST00000552829 RLFQ13129 1914 aa14.21□□□□□ -0.14
SUPT16H-202ENST00000552829 SEMA3EO15041 775 aa14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 HOXA7P31268 230 aaPredicted RBP14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 MORN1Q5T089 497 aa14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 SYMPKQ92797 1274 aaKnown RBP14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 P2RX7Q99572 595 aaKnown RBP14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 LBHD1Q9BQE6 289 aaPredicted RBP14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 TTYH1Q9H313 450 aaPredicted RBP14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 CDH23Q9H251 3354 aa14.2□□□□□ -0.14
SUPT16H-202ENST00000552829 FAM196BA6NMK8 535 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 PEX10O60683 326 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 ZKSCAN1P17029 563 aaPredicted RBP14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 COL9A1P20849 921 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 PHKA1P46020 1223 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 RHBDL3P58872 404 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 CCL14Q16627 93 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 CCDC184Q52MB2 194 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 USP44Q9H0E7 712 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 GNL3LQ9NVN8 582 aaKnown RBP14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 RBPJLQ9UBG7 517 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 MYO9BQ13459 2157 aa14.19□□□□□ -0.14
SUPT16H-202ENST00000552829 GPR75-ASB3A0A0A6YYF3 556 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 USP17L5A8MUK1 530 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 MAPK4P31152 587 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 CAP2P40123 477 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 SHHQ15465 462 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 Q3C1V9 767 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 POTEEQ6S8J3 1075 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 GPRC5AQ8NFJ5 357 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 MYLIPQ8WY64 445 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 WDR18Q9BV38 432 aa14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.18□□□□□ -0.14
SUPT16H-202ENST00000552829 BTDP43251 543 aa14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 HERVK_113P62684 666 aa14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 SMAD3P84022 425 aaKnown RBP14.17□□□□□ -0.14
SUPT16H-202ENST00000552829 PICALMQ13492 652 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms