RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 PDE4CQ08493 712 aa7.48□□□□□ -1.21
SMARCC2-213ENST00000552627 TRIP4Q15650 581 aaPredicted RBP7.48□□□□□ -1.21
SMARCC2-213ENST00000552627 NOM1Q5C9Z4 860 aaKnown RBP7.48□□□□□ -1.21
SMARCC2-213ENST00000552627 TRPM4Q8TD43 1214 aa7.48□□□□□ -1.21
SMARCC2-213ENST00000552627 TRIM11Q96F44 468 aa7.48□□□□□ -1.21
SMARCC2-213ENST00000552627 ACSBG1Q96GR2 724 aa7.48□□□□□ -1.21
SMARCC2-213ENST00000552627 TOGARAM1Q9Y4F4 1720 aa7.48□□□□□ -1.21
SMARCC2-213ENST00000552627 IGSF1Q8N6C5 1336 aa7.48□□□□□ -1.21
SMARCC2-213ENST00000552627 PARD3Q8TEW0 1356 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 SPDYE3A6NKU9 549 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 ZBTB42B2RXF5 422 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 PSAPP07602 524 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 CPB1P15086 417 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 GPLD1P80108 840 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 MLLT1Q03111 559 aaPredicted RBP7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 FAM196AQ6ZSG2 479 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 RETREG2Q8NC44 543 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 NUDT8Q8WV74 236 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 RAPGEF4Q8WZA2 1011 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 JPH1Q9HDC5 661 aaPredicted RBP7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 BTAF1O14981 1849 aa7.47□□□□□ -1.21
SMARCC2-213ENST00000552627 KCNQ2O43526 872 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 MMP20O60882 483 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 RGS9O75916 674 aaPredicted RBP7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 HMOX1P09601 288 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 NRLP54845 237 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 PLAURQ03405 335 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 MTMR3Q13615 1198 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 COL9A3Q14050 684 aaPredicted RBP7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 PLA2G4EQ3MJ16 856 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 SULT6B1Q6IMI4 303 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 ATCAYQ86WG3 371 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 RREB1Q92766 1687 aa7.46□□□□□ -1.22
SMARCC2-213ENST00000552627 NUP188Q5SRE5 1749 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 KRBA1A5PL33 1030 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 U2SURPO15042 1029 aaKnown RBP7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 APBA3O96018 575 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 ABL1P00519 1130 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 MPSTP25325 297 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 EIF1AXP47813 144 aaKnown RBP7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 SF3B2Q13435 895 aaKnown RBP7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 ALKBH2Q6NS38 261 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 GPAT2Q6NUI2 795 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 ELMSAN1Q6PJG2 1045 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 HFE2Q6ZVN8 426 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 ITGB4P16144 1822 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 KAT6BQ8WYB5 2073 aa7.45□□□□□ -1.22
SMARCC2-213ENST00000552627 VIRMAQ69YN4 1812 aaKnown RBP7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 CYP27B1O15528 508 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 FAM13AO94988 1023 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 RPLP1P05386 114 aaKnown RBP7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 NID1P14543 1247 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 PCSK2P16519 638 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 SOX18P35713 384 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 FKBP4Q02790 459 aaKnown RBP eCLIP7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 DNM1Q05193 864 aaKnown RBP7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 AAMPQ13685 434 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 EZH2Q15910 746 aaKnown RBP7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 PERM1Q5SV97 790 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 TTC39BQ5VTQ0 682 aaPredicted RBP7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 EDEM1Q92611 657 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 SYTL4Q96C24 671 aaPredicted RBP7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 FRRS1LQ9P0K9 344 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 PCDH11XQ9BZA7 1347 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 PCDH11YQ9BZA8 1340 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 KDRP35968 1356 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 BCL9O00512 1426 aa7.44□□□□□ -1.22
SMARCC2-213ENST00000552627 LOC102724428A0A0B4J2F2 783 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 IGHA1P01876 353 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 NPR3P17342 541 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 EIF2AK2P19525 551 aaKnown RBP7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 BAG6P46379 1132 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 AFF1P51825 1210 aaKnown RBP7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 SIK1P57059 783 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 PRRT3Q5FWE3 981 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 TTC16Q8NEE8 873 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 NSUN5Q96P11 429 aaKnown RBP7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 LPIN3Q9BQK8 851 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 ANO2Q9NQ90 1003 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 RGPD3A6NKT7 1758 aaPredicted RBP7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 RGPD4Q7Z3J3 1758 aa7.43□□□□□ -1.22
SMARCC2-213ENST00000552627 J3QW42 95 aa7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 SPATA31C1P0DKV0 1188 aa7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 HOXD8P13378 290 aaPredicted RBP7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 PHKG2P15735 406 aa7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 MZF1P28698 734 aaPredicted RBP7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 TRIM28Q13263 835 aaKnown RBP7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 PDE12Q6L8Q7 609 aaKnown RBP7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 OR13H1Q8NG92 308 aa7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 CFAP53Q96M91 514 aa7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 CAMKK2Q96RR4 588 aa7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 SMG9Q9H0W8 520 aaKnown RBP7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 SPG7Q9UQ90 795 aa7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 KDM6AO15550 1401 aaPredicted RBP7.42□□□□□ -1.22
SMARCC2-213ENST00000552627 GHRHP01286 108 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms