RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 TRIM34Q9BYJ4 488 aa13.25□□□□□ -0.29
TMEM116-215ENST00000552374 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
TMEM116-215ENST00000552374 AFG3L2Q9Y4W6 797 aa13.25□□□□□ -0.29
TMEM116-215ENST00000552374 FLT1P17948 1338 aa13.25□□□□□ -0.29
TMEM116-215ENST00000552374 MAGEB6P1A0A0J9YX57 407 aa13.24□□□□□ -0.29
TMEM116-215ENST00000552374 TRIM75PA6NK02 468 aa13.24□□□□□ -0.29
TMEM116-215ENST00000552374 PDE6AP16499 860 aa13.24□□□□□ -0.29
TMEM116-215ENST00000552374 GADL1Q6ZQY3 521 aa13.24□□□□□ -0.29
TMEM116-215ENST00000552374 CRBNQ96SW2 442 aa13.24□□□□□ -0.29
TMEM116-215ENST00000552374 HERC5Q9UII4 1024 aaKnown RBP13.24□□□□□ -0.29
TMEM116-215ENST00000552374 HPS5Q9UPZ3 1129 aa13.24□□□□□ -0.29
TMEM116-215ENST00000552374 AK9Q5TCS8 1911 aa13.24□□□□□ -0.29
TMEM116-215ENST00000552374 TLR2O60603 784 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
TMEM116-215ENST00000552374 HLA-DOAP06340 250 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 CAP2P40123 477 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 RRP1BQ14684 758 aaKnown RBP13.23□□□□□ -0.29
TMEM116-215ENST00000552374 FBXO46Q6PJ61 603 aaPredicted RBP13.23□□□□□ -0.29
TMEM116-215ENST00000552374 FASTKD5Q7L8L6 764 aaKnown RBP13.23□□□□□ -0.29
TMEM116-215ENST00000552374 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 ANKRD23Q86SG2 305 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 CERS3Q8IU89 383 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 HAUS7Q99871 368 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 EFCC1Q9HA90 598 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 ZNF532Q9HCE3 1301 aa13.23□□□□□ -0.29
TMEM116-215ENST00000552374 ZCCHC17Q9NP64 241 aaKnown RBP13.23□□□□□ -0.29
TMEM116-215ENST00000552374 SPP2Q13103 211 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 MOGSQ13724 837 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 GPAT2Q6NUI2 795 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 TMED8Q6PL24 325 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-215ENST00000552374 CPA4Q9UI42 421 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 A0A0G2JLL6 359 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-215ENST00000552374 USP17L5A8MUK1 530 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 CYP2C8P10632 490 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 CAP1Q01518 475 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 KIF22Q14807 665 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 ARHGEF6Q15052 776 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 PRRT2Q7Z6L0 340 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-215ENST00000552374 RIOK1Q9BRS2 568 aaKnown RBP13.22□□□□□ -0.29
TMEM116-215ENST00000552374 CRNKL1Q9BZJ0 848 aaKnown RBP13.22□□□□□ -0.29
TMEM116-215ENST00000552374 ECHDC1Q9NTX5 307 aa13.22□□□□□ -0.29
TMEM116-215ENST00000552374 TCRBV5S4A2TA0A5A2 114 aa13.21□□□□□ -0.3
TMEM116-215ENST00000552374 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.3
TMEM116-215ENST00000552374 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.3
TMEM116-215ENST00000552374 ZNF280CQ8ND82 737 aa13.21□□□□□ -0.3
TMEM116-215ENST00000552374 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.31e-6■□□□□ 8.8
TMEM116-215ENST00000552374 DNAJC18Q9H819 358 aa13.21□□□□□ -0.3
TMEM116-215ENST00000552374 PTPN22Q9Y2R2 807 aa13.21□□□□□ -0.3
TMEM116-215ENST00000552374 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 GDF11O95390 407 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 SOX10P56693 466 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 JAG1P78504 1218 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 C17orf99Q6UX52 265 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 TTC6Q86TZ1 520 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 METTL16Q86W50 562 aaKnown RBP13.2□□□□□ -0.3
TMEM116-215ENST00000552374 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
TMEM116-215ENST00000552374 CHGBP05060 677 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 ASNSP08243 561 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 ADD2P35612 726 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 PLCD1P51178 756 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 HMGCS2P54868 508 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 LACTBP83111 547 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-215ENST00000552374 SHROOM1Q2M3G4 852 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-215ENST00000552374 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
TMEM116-215ENST00000552374 AS3MTQ9HBK9 375 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 MCM9Q9NXL9 1143 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-215ENST00000552374 SERPINB13Q9UIV8 391 aa13.19□□□□□ -0.3
TMEM116-215ENST00000552374 COL2A1P02458 1487 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-215ENST00000552374 PRKAB2O43741 272 aa13.18□□□□□ -0.3
TMEM116-215ENST00000552374 TREML2Q5T2D2 321 aa13.18□□□□□ -0.3
TMEM116-215ENST00000552374 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
TMEM116-215ENST00000552374 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
TMEM116-215ENST00000552374 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
TMEM116-215ENST00000552374 MBD4O95243 580 aa13.17□□□□□ -0.3
TMEM116-215ENST00000552374 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-215ENST00000552374 GH2P01242 217 aa13.17□□□□□ -0.3
TMEM116-215ENST00000552374 PSMC4P43686 418 aa13.17□□□□□ -0.3
TMEM116-215ENST00000552374 RGS19P49795 217 aa13.17□□□□□ -0.3
TMEM116-215ENST00000552374 BACE1P56817 501 aa13.17□□□□□ -0.3
TMEM116-215ENST00000552374 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
TMEM116-215ENST00000552374 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-215ENST00000552374 SMCR8Q8TEV9 937 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-215ENST00000552374 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
TMEM116-215ENST00000552374 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
TMEM116-215ENST00000552374 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
TMEM116-215ENST00000552374 MLLT1Q03111 559 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-215ENST00000552374 MTMR2Q13614 643 aa13.16□□□□□ -0.3
TMEM116-215ENST00000552374 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
TMEM116-215ENST00000552374 TATDN1Q6P1N9 297 aa13.16□□□□□ -0.3
TMEM116-215ENST00000552374 OTUD7AQ8TE49 926 aaPredicted RBP13.16□□□□□ -0.3
TMEM116-215ENST00000552374 WDR18Q9BV38 432 aa13.16□□□□□ -0.3
TMEM116-215ENST00000552374 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
TMEM116-215ENST00000552374 EHD4Q9H223 541 aa13.16□□□□□ -0.3
TMEM116-215ENST00000552374 ZBTB21Q9ULJ3 1066 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms