RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 CYP7A1P22680 504 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 RHBDL3P58872 404 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 PPP4CP60510 307 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 SP3Q02447 781 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 TCP10Q12799 353 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 NFIAQ12857 509 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 VGLL4Q14135 290 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 TMED8Q6PL24 325 aaPredicted RBP11.1□□□□□ -0.63
CDK4-211ENST00000552254 MIGA2Q7L4E1 593 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.1□□□□□ -0.631e-7■■■■□ 25.5
CDK4-211ENST00000552254 FAM151AQ8WW52 585 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 ZNF333Q96JL9 665 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 PTPN18Q99952 460 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 IDI2Q9BXS1 227 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
CDK4-211ENST00000552254 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 STAP2Q9UGK3 403 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 RFX7Q2KHR2 1363 aa11.1□□□□□ -0.63
CDK4-211ENST00000552254 NCOR1O75376 2440 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 ERC2O15083 957 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 WDHD1O75717 1129 aaPredicted RBP11.09□□□□□ -0.63
CDK4-211ENST00000552254 GLRX3O76003 335 aaKnown RBP11.09□□□□□ -0.63
CDK4-211ENST00000552254 BAG3O95817 575 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 PDE6AP16499 860 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 RGS3P49796 1198 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 PDE1AP54750 535 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 CRHR2Q13324 411 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 SLC9C2Q5TAH2 1124 aa11.09□□□□□ -0.63
CDK4-211ENST00000552254 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
CDK4-211ENST00000552254 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
CDK4-211ENST00000552254 NOL10Q9BSC4 688 aaKnown RBP11.09□□□□□ -0.63
CDK4-211ENST00000552254 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDK4-211ENST00000552254 LAMA2P24043 3122 aaKnown RBP11.09□□□□□ -0.63
CDK4-211ENST00000552254 RPAP1Q9BWH6 1393 aaPredicted RBP11.08□□□□□ -0.64
CDK4-211ENST00000552254 TCRBV5S4A2TA0A5A2 114 aa11.08□□□□□ -0.64
CDK4-211ENST00000552254 ENTPD3O75355 529 aa11.08□□□□□ -0.64
CDK4-211ENST00000552254 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
CDK4-211ENST00000552254 DYNLL1P63167 89 aaKnown RBP11.08□□□□□ -0.64
CDK4-211ENST00000552254 ZFPM1Q8IX07 1006 aa11.08□□□□□ -0.64
CDK4-211ENST00000552254 WRNIP1Q96S55 665 aa11.08□□□□□ -0.64
CDK4-211ENST00000552254 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDK4-211ENST00000552254 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
CDK4-211ENST00000552254 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.64
CDK4-211ENST00000552254 ZNF532Q9HCE3 1301 aa11.08□□□□□ -0.64
CDK4-211ENST00000552254 SIPA1L1O43166 1804 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 NAV1Q8NEY1 1877 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 UNCXA6NJT0 531 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 NPM3O75607 178 aaKnown RBP11.07□□□□□ -0.64
CDK4-211ENST00000552254 SLURP2P0DP57 97 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 PLCG2P16885 1265 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 INPP5BP32019 993 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 ADD2P35612 726 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 PICALMQ13492 652 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 SLFNL1Q499Z3 407 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 PLEKHM2Q8IWE5 1019 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 TEX11Q8IYF3 940 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 KBTBD3Q8NAB2 608 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 MIGA1Q8NAN2 632 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 SNX27Q96L92 541 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 HTATIP2Q9BUP3 242 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 CSADQ9Y600 493 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 SNCAIPQ9Y6H5 919 aa11.07□□□□□ -0.64
CDK4-211ENST00000552254 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
CDK4-211ENST00000552254 CCL15-CCL14A0A0B4J2E2 113 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
CDK4-211ENST00000552254 CHGBP05060 677 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 NEFLP07196 543 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 CAP1Q01518 475 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 UBE3CQ15386 1083 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 CCL15Q16663 113 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 ZSCAN25Q6NSZ9 544 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 SH3BP5LQ7L8J4 393 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 BRI3BPQ8WY22 251 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 FAM122AQ96E09 287 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 RIOK1Q9BRS2 568 aaKnown RBP11.06□□□□□ -0.64
CDK4-211ENST00000552254 OSBPL3Q9H4L5 887 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 ZSWIM8A7E2V4 1837 aa11.06□□□□□ -0.64
CDK4-211ENST00000552254 COL2A1P02458 1487 aaPredicted RBP11.06□□□□□ -0.64
CDK4-211ENST00000552254 ATAD5Q96QE3 1844 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 DDTLA6NHG4 134 aaPredicted RBP11.05□□□□□ -0.64
CDK4-211ENST00000552254 SPDYE5A6NIY4 337 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 PDE4AP27815 886 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 KIF22Q14807 665 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 DDX60LQ5H9U9 1706 aaKnown RBP11.05□□□□□ -0.64
CDK4-211ENST00000552254 FAM43AQ8N2R8 423 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 SH3TC2Q8TF17 1288 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 TGFBRAP1Q8WUH2 860 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 HOOK2Q96ED9 719 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 ZNF341Q9BYN7 854 aa11.05□□□□□ -0.64
CDK4-211ENST00000552254 OSBPL5Q9H0X9 879 aaPredicted RBP11.05□□□□□ -0.64
CDK4-211ENST00000552254 ATRNL1Q5VV63 1379 aa11.04□□□□□ -0.64
CDK4-211ENST00000552254 IRF6O14896 467 aa11.04□□□□□ -0.64
CDK4-211ENST00000552254 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
CDK4-211ENST00000552254 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms