RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 NPM3O75607 178 aaKnown RBP20.21■□□□□ 0.83
RAB5C-209ENST00000552162 SPP2Q13103 211 aa20.21■□□□□ 0.83
RAB5C-209ENST00000552162 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
RAB5C-209ENST00000552162 NECAB2Q7Z6G3 386 aa20.21■□□□□ 0.83
RAB5C-209ENST00000552162 ZNF384Q8TF68 577 aa20.21■□□□□ 0.83
RAB5C-209ENST00000552162 XAGE2Q96GT9 111 aa20.21■□□□□ 0.83
RAB5C-209ENST00000552162 MEIS3Q99687 375 aa20.21■□□□□ 0.83
RAB5C-209ENST00000552162 STAP2Q9UGK3 403 aa20.21■□□□□ 0.83
RAB5C-209ENST00000552162 NOB1Q9ULX3 412 aaKnown RBP20.21■□□□□ 0.83
RAB5C-209ENST00000552162 HMGCRP04035 888 aa20.2■□□□□ 0.82
RAB5C-209ENST00000552162 GCLCP48506 637 aaPredicted RBP20.2■□□□□ 0.82
RAB5C-209ENST00000552162 HMGCS2P54868 508 aa20.2■□□□□ 0.82
RAB5C-209ENST00000552162 TFCP2Q12800 502 aa20.2■□□□□ 0.82
RAB5C-209ENST00000552162 ZNF280CQ8ND82 737 aa20.2■□□□□ 0.82
RAB5C-209ENST00000552162 CDCA7LQ96GN5 454 aa20.2■□□□□ 0.82
RAB5C-209ENST00000552162 LRCH3Q96II8 777 aa20.2■□□□□ 0.82
RAB5C-209ENST00000552162 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
RAB5C-209ENST00000552162 DDX60LQ5H9U9 1706 aaKnown RBP20.19■□□□□ 0.82
RAB5C-209ENST00000552162 PABPC4Q13310 644 aaKnown RBP eCLIP20.19■□□□□ 0.82
RAB5C-209ENST00000552162 ANKLE1Q8NAG6 615 aa20.19■□□□□ 0.82
RAB5C-209ENST00000552162 SLC17A8Q8NDX2 589 aa20.19■□□□□ 0.82
RAB5C-209ENST00000552162 TBC1D2Q9BYX2 928 aa20.19■□□□□ 0.82
RAB5C-209ENST00000552162 API5Q9BZZ5 524 aaKnown RBP20.19■□□□□ 0.82
RAB5C-209ENST00000552162 PLXNB2O15031 1838 aa20.18■□□□□ 0.82
RAB5C-209ENST00000552162 GSTO1P78417 241 aa20.18■□□□□ 0.82
RAB5C-209ENST00000552162 PI16Q6UXB8 463 aa20.18■□□□□ 0.82
RAB5C-209ENST00000552162 NSUN4Q96CB9 384 aaKnown RBP20.18■□□□□ 0.82
RAB5C-209ENST00000552162 HMG20BQ9P0W2 317 aa20.18■□□□□ 0.82
RAB5C-209ENST00000552162 SRGAP3O43295 1099 aa20.17■□□□□ 0.82
RAB5C-209ENST00000552162 MAP4K4O95819 1239 aaPredicted RBP20.17■□□□□ 0.82
RAB5C-209ENST00000552162 LDHCP07864 332 aa20.17■□□□□ 0.82
RAB5C-209ENST00000552162 CAP2P40123 477 aa20.17■□□□□ 0.82
RAB5C-209ENST00000552162 C7orf61Q8IZ16 206 aa20.17■□□□□ 0.82
RAB5C-209ENST00000552162 NEUROD6Q96NK8 337 aa20.17■□□□□ 0.82
RAB5C-209ENST00000552162 ASCC2Q9H1I8 757 aaPredicted RBP20.17■□□□□ 0.82
RAB5C-209ENST00000552162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.17■□□□□ 0.82
RAB5C-209ENST00000552162 SIPA1L1O43166 1804 aa20.17■□□□□ 0.82
RAB5C-209ENST00000552162 RPTORQ8N122 1335 aa20.17■□□□□ 0.82
RAB5C-209ENST00000552162 USP17L5A8MUK1 530 aa20.16■□□□□ 0.82
RAB5C-209ENST00000552162 TRIM32Q13049 653 aa20.16■□□□□ 0.82
RAB5C-209ENST00000552162 RRP1BQ14684 758 aaKnown RBP20.16■□□□□ 0.82
RAB5C-209ENST00000552162 TBC1D9Q6ZT07 1266 aa20.16■□□□□ 0.82
RAB5C-209ENST00000552162 SPATA5Q8NB90 893 aa20.16■□□□□ 0.82
RAB5C-209ENST00000552162 GDF15Q99988 308 aa20.16■□□□□ 0.82
RAB5C-209ENST00000552162 HMX1Q9NP08 348 aaPredicted RBP20.16■□□□□ 0.82
RAB5C-209ENST00000552162 GJD2Q9UKL4 321 aa20.16■□□□□ 0.82
RAB5C-209ENST00000552162 MAST2Q6P0Q8 1798 aa20.16■□□□□ 0.82
RAB5C-209ENST00000552162 CT47B1P0C2W7 299 aaPredicted RBP20.15■□□□□ 0.82
RAB5C-209ENST00000552162 SH3D19Q5HYK7 790 aa20.15■□□□□ 0.82
RAB5C-209ENST00000552162 NBPF3Q9H094 633 aa20.15■□□□□ 0.82
RAB5C-209ENST00000552162 AS3MTQ9HBK9 375 aa20.15■□□□□ 0.82
RAB5C-209ENST00000552162 RAI14Q9P0K7 980 aa20.15■□□□□ 0.82
RAB5C-209ENST00000552162 HERC5Q9UII4 1024 aaKnown RBP20.15■□□□□ 0.82
RAB5C-209ENST00000552162 ZMYND8Q9ULU4 1186 aaPredicted RBP20.15■□□□□ 0.82
RAB5C-209ENST00000552162 DLL1O00548 723 aa20.14■□□□□ 0.81
RAB5C-209ENST00000552162 BMP8BP34820 402 aa20.14■□□□□ 0.81
RAB5C-209ENST00000552162 MTX1Q13505 466 aa20.14■□□□□ 0.81
RAB5C-209ENST00000552162 GORABQ5T7V8 394 aa20.14■□□□□ 0.81
RAB5C-209ENST00000552162 TEX11Q8IYF3 940 aa20.14■□□□□ 0.81
RAB5C-209ENST00000552162 TRMT2AQ8IZ69 625 aaKnown RBP20.14■□□□□ 0.81
RAB5C-209ENST00000552162 TRIB2Q92519 343 aa20.14■□□□□ 0.81
RAB5C-209ENST00000552162 MORF4L1Q9UBU8 362 aa20.14■□□□□ 0.81
RAB5C-209ENST00000552162 A0A0C4DFX4 3053 aa20.14■□□□□ 0.81
RAB5C-209ENST00000552162 GNAI3P08754 354 aa20.13■□□□□ 0.81
RAB5C-209ENST00000552162 ARID4AP29374 1257 aaPredicted RBP20.13■□□□□ 0.81
RAB5C-209ENST00000552162 MNX1P50219 401 aaPredicted RBP20.13■□□□□ 0.81
RAB5C-209ENST00000552162 IRX3P78415 501 aaPredicted RBP20.13■□□□□ 0.81
RAB5C-209ENST00000552162 MTMR2Q13614 643 aa20.13■□□□□ 0.81
RAB5C-209ENST00000552162 CDK5RAP2Q96SN8 1893 aa20.13■□□□□ 0.81
RAB5C-209ENST00000552162 FOCADQ5VW36 1801 aa20.12■□□□□ 0.81
RAB5C-209ENST00000552162 SH3RF3Q8TEJ3 882 aaPredicted RBP20.12■□□□□ 0.81
RAB5C-209ENST00000552162 NOL10Q9BSC4 688 aaKnown RBP20.12■□□□□ 0.81
RAB5C-209ENST00000552162 C11orf49Q9H6J7 331 aa20.12■□□□□ 0.81
RAB5C-209ENST00000552162 SYN1P17600 705 aa20.11■□□□□ 0.81
RAB5C-209ENST00000552162 CYP2B6P20813 491 aa20.11■□□□□ 0.81
RAB5C-209ENST00000552162 MCAMP43121 646 aa20.11■□□□□ 0.81
RAB5C-209ENST00000552162 WDR18Q9BV38 432 aa20.11■□□□□ 0.81
RAB5C-209ENST00000552162 TMOD4Q9NZQ9 345 aa20.11■□□□□ 0.81
RAB5C-209ENST00000552162 LRP2BPQ9P2M1 347 aa20.11■□□□□ 0.81
RAB5C-209ENST00000552162 PI4KBQ9UBF8 816 aa20.11■□□□□ 0.81
RAB5C-209ENST00000552162 OGDHLQ9ULD0 1010 aa20.11■□□□□ 0.81
RAB5C-209ENST00000552162 ASNSP08243 561 aa20.1■□□□□ 0.81
RAB5C-209ENST00000552162 PRKAR2AP13861 404 aaKnown RBP20.1■□□□□ 0.81
RAB5C-209ENST00000552162 BACE1P56817 501 aa20.1■□□□□ 0.81
RAB5C-209ENST00000552162 MAP3K21Q5TCX8 1036 aa20.1■□□□□ 0.81
RAB5C-209ENST00000552162 GPR153Q6NV75 609 aa20.1■□□□□ 0.81
RAB5C-209ENST00000552162 SOCS4Q8WXH5 440 aa20.1■□□□□ 0.81
RAB5C-209ENST00000552162 DHX36Q9H2U1 1008 aaKnown RBP20.1■□□□□ 0.81
RAB5C-209ENST00000552162 PEX10O60683 326 aa20.09■□□□□ 0.81
RAB5C-209ENST00000552162 HOXA7P31268 230 aaPredicted RBP20.09■□□□□ 0.81
RAB5C-209ENST00000552162 MAGEA10P43363 369 aaPredicted RBP20.09■□□□□ 0.81
RAB5C-209ENST00000552162 HERVK_113P62684 666 aa20.09■□□□□ 0.81
RAB5C-209ENST00000552162 P2RX7Q99572 595 aaKnown RBP20.09■□□□□ 0.81
RAB5C-209ENST00000552162 NUDT12Q9BQG2 462 aa20.09■□□□□ 0.81
RAB5C-209ENST00000552162 TXNRD2Q9NNW7 524 aa20.09■□□□□ 0.81
RAB5C-209ENST00000552162 AATFQ9NY61 560 aaKnown RBP eCLIP20.09■□□□□ 0.81
RAB5C-209ENST00000552162 PFASO15067 1338 aa20.08■□□□□ 0.81
RAB5C-209ENST00000552162 UQCRFS1P1P0C7P4 283 aa20.08■□□□□ 0.81
RAB5C-209ENST00000552162 XRCC5P13010 732 aaKnown RBP20.08■□□□□ 0.81
RAB5C-209ENST00000552162 JAG1P78504 1218 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms