RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 CCDC57Q2TAC2 916 aa15.8■□□□□ 0.12
SNRPF-204ENST00000552085 TMEM31Q5JXX7 168 aa15.8■□□□□ 0.12
SNRPF-204ENST00000552085 EPHX3Q9H6B9 360 aa15.8■□□□□ 0.12
SNRPF-204ENST00000552085 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.79■□□□□ 0.12
SNRPF-204ENST00000552085 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.79■□□□□ 0.12
SNRPF-204ENST00000552085 CTNND1O60716 968 aaKnown RBP15.79■□□□□ 0.12
SNRPF-204ENST00000552085 LMBR1LQ6UX01 489 aa15.79■□□□□ 0.12
SNRPF-204ENST00000552085 CCDC84Q86UT8 332 aaPredicted RBP15.79■□□□□ 0.12
SNRPF-204ENST00000552085 ZFPM1Q8IX07 1006 aa15.79■□□□□ 0.12
SNRPF-204ENST00000552085 LPAR1Q92633 364 aa15.79■□□□□ 0.12
SNRPF-204ENST00000552085 USP6NLQ92738 828 aa15.79■□□□□ 0.12
SNRPF-204ENST00000552085 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
SNRPF-204ENST00000552085 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
SNRPF-204ENST00000552085 PDLIM7Q9NR12 457 aa15.79■□□□□ 0.12
SNRPF-204ENST00000552085 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.79■□□□□ 0.12
SNRPF-204ENST00000552085 MUC6Q6W4X9 2439 aa15.78■□□□□ 0.12
SNRPF-204ENST00000552085 BMP1P13497 986 aa15.78■□□□□ 0.12
SNRPF-204ENST00000552085 RGS2P41220 211 aa15.78■□□□□ 0.12
SNRPF-204ENST00000552085 CCDC85BQ15834 202 aaPredicted RBP15.78■□□□□ 0.12
SNRPF-204ENST00000552085 CAVIN4Q5BKX8 364 aa15.78■□□□□ 0.12
SNRPF-204ENST00000552085 SLC39A5Q6ZMH5 540 aa15.78■□□□□ 0.12
SNRPF-204ENST00000552085 DAGLAQ9Y4D2 1042 aa15.78■□□□□ 0.12
SNRPF-204ENST00000552085 TRIM43BA6NCK2 446 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 MSCO60682 206 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 MAP3K10Q02779 954 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 TRIM60Q495X7 471 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 SH3RF1Q7Z6J0 888 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 LINS1Q8NG48 757 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 TRIM43Q96BQ3 446 aaPredicted RBP15.77■□□□□ 0.12
SNRPF-204ENST00000552085 RUNDC1Q96C34 613 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 APBA2Q99767 749 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 STK31Q9BXU1 1019 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 PRDM12Q9H4Q4 367 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 IFT57Q9NWB7 429 aa15.77■□□□□ 0.12
SNRPF-204ENST00000552085 DDX20Q9UHI6 824 aaKnown RBP15.77■□□□□ 0.12
SNRPF-204ENST00000552085 MAPK4P31152 587 aa15.76■□□□□ 0.11
SNRPF-204ENST00000552085 EPHB4P54760 987 aa15.76■□□□□ 0.11
SNRPF-204ENST00000552085 GNAI1P63096 354 aa15.76■□□□□ 0.11
SNRPF-204ENST00000552085 G2E3Q7L622 706 aa15.76■□□□□ 0.11
SNRPF-204ENST00000552085 P2RX7Q99572 595 aaKnown RBP15.76■□□□□ 0.11
SNRPF-204ENST00000552085 USP40Q9NVE5 1235 aa15.76■□□□□ 0.11
SNRPF-204ENST00000552085 CXXC1Q9P0U4 656 aaPredicted RBP15.76■□□□□ 0.11
SNRPF-204ENST00000552085 MRE11P49959 708 aa15.75■□□□□ 0.11
SNRPF-204ENST00000552085 HMGCS2P54868 508 aa15.75■□□□□ 0.11
SNRPF-204ENST00000552085 SPP2Q13103 211 aa15.75■□□□□ 0.11
SNRPF-204ENST00000552085 SNX17Q15036 470 aa15.75■□□□□ 0.11
SNRPF-204ENST00000552085 MORN1Q5T089 497 aa15.75■□□□□ 0.11
SNRPF-204ENST00000552085 GPRC5AQ8NFJ5 357 aa15.75■□□□□ 0.11
SNRPF-204ENST00000552085 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
SNRPF-204ENST00000552085 MYH2Q9UKX2 1941 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 PEX10O60683 326 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 SLURP2P0DP57 97 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 CNGA1P29973 690 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 DIXDC1Q155Q3 683 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 EPHA10Q5JZY3 1008 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 GJC2Q5T442 439 aaPredicted RBP15.74■□□□□ 0.11
SNRPF-204ENST00000552085 SH3BP5LQ7L8J4 393 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
SNRPF-204ENST00000552085 TSPYL6Q8N831 410 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 PUS3Q9BZE2 481 aaKnown RBP15.74■□□□□ 0.11
SNRPF-204ENST00000552085 TXNRD2Q9NNW7 524 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 CACNA1FO60840 1977 aa15.74■□□□□ 0.11
SNRPF-204ENST00000552085 MROH5Q6ZUA9 1318 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 GPR37L1O60883 481 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 ENTPD3O75355 529 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 IGFBP4P22692 258 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 RGS3P49796 1198 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 IRX3P78415 501 aaPredicted RBP15.73■□□□□ 0.11
SNRPF-204ENST00000552085 ADGRE1Q14246 886 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 MFSD14CQ5VZR4 134 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 GPR142Q7Z601 462 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 ARRDC4Q8NCT1 418 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 ZNF280CQ8ND82 737 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 DNAAF4Q8WXU2 420 aa15.73■□□□□ 0.11
SNRPF-204ENST00000552085 UTYO14607 1347 aa15.72■□□□□ 0.11
SNRPF-204ENST00000552085 KBTBD13C9JR72 458 aa15.72■□□□□ 0.11
SNRPF-204ENST00000552085 ITGB8P26012 769 aa15.72■□□□□ 0.11
SNRPF-204ENST00000552085 AAK1Q2M2I8 961 aa15.72■□□□□ 0.11
SNRPF-204ENST00000552085 PLEKHH3Q7Z736 793 aa15.72■□□□□ 0.11
SNRPF-204ENST00000552085 CCAR1Q8IX12 1150 aaKnown RBP15.72■□□□□ 0.11
SNRPF-204ENST00000552085 IDI2Q9BXS1 227 aa15.72■□□□□ 0.11
SNRPF-204ENST00000552085 TBC1D2Q9BYX2 928 aa15.72■□□□□ 0.11
SNRPF-204ENST00000552085 DDTLA6NHG4 134 aaPredicted RBP15.71■□□□□ 0.11
SNRPF-204ENST00000552085 MAP2K5Q13163 448 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 SH3D19Q5HYK7 790 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 C1orf53Q5VUE5 145 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 WDR66Q8TBY9 1149 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 EDC3Q96F86 508 aaKnown RBP15.71■□□□□ 0.11
SNRPF-204ENST00000552085 PORCNQ9H237 461 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 C11orf16Q9NQ32 467 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 FLRT1Q9NZU1 646 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 TACC3Q9Y6A5 838 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 GBF1Q92538 1859 aa15.71■□□□□ 0.11
SNRPF-204ENST00000552085 MYBBP1AQ9BQG0 1328 aaKnown RBP15.7■□□□□ 0.1
SNRPF-204ENST00000552085 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
SNRPF-204ENST00000552085 ZEB1P37275 1124 aaPredicted RBP15.7■□□□□ 0.1
SNRPF-204ENST00000552085 KCNQ1P51787 676 aa15.7■□□□□ 0.1
SNRPF-204ENST00000552085 HERVK_113P62684 666 aa15.7■□□□□ 0.1
SNRPF-204ENST00000552085 TFF2Q03403 129 aa15.7■□□□□ 0.1
SNRPF-204ENST00000552085 CALD1Q05682 793 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms