RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 CFHR5Q9BXR6 569 aa20.27■□□□□ 0.84
BRF1-219ENST00000551787 DHX36Q9H2U1 1008 aaKnown RBP20.27■□□□□ 0.84
BRF1-219ENST00000551787 TCRBV5S4A2TA0A5A2 114 aa20.26■□□□□ 0.83
BRF1-219ENST00000551787 BTBD19C9JJ37 291 aa20.26■□□□□ 0.83
BRF1-219ENST00000551787 FKTNO75072 461 aa20.26■□□□□ 0.83
BRF1-219ENST00000551787 TAF1CQ15572 869 aaPredicted RBP20.25■□□□□ 0.83
BRF1-219ENST00000551787 CRACR2BQ8N4Y2 399 aaPredicted RBP20.25■□□□□ 0.83
BRF1-219ENST00000551787 KCNH4Q9UQ05 1017 aa20.25■□□□□ 0.83
BRF1-219ENST00000551787 MAST2Q6P0Q8 1798 aa20.25■□□□□ 0.83
BRF1-219ENST00000551787 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
BRF1-219ENST00000551787 CTU1Q7Z7A3 348 aaKnown RBP20.24■□□□□ 0.83
BRF1-219ENST00000551787 FOXP4Q8IVH2 680 aaPredicted RBP20.24■□□□□ 0.83
BRF1-219ENST00000551787 GPATCH3Q96I76 525 aa20.24■□□□□ 0.83
BRF1-219ENST00000551787 ARMT1Q9H993 441 aa20.24■□□□□ 0.83
BRF1-219ENST00000551787 ZFYVE28Q9HCC9 887 aa20.24■□□□□ 0.83
BRF1-219ENST00000551787 HERC5Q9UII4 1024 aaKnown RBP20.24■□□□□ 0.83
BRF1-219ENST00000551787 DOCK2Q92608 1830 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 TRIM75PA6NK02 468 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 ADD2P35612 726 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 MOGSQ13724 837 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 NOM1Q5C9Z4 860 aaKnown RBP20.23■□□□□ 0.83
BRF1-219ENST00000551787 TMED8Q6PL24 325 aaPredicted RBP20.23■□□□□ 0.83
BRF1-219ENST00000551787 CERS3Q8IU89 383 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 LCORLQ8N3X6 602 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 TRIM34Q9BYJ4 488 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.23■□□□□ 0.831e-6■■■■□ 26.5
BRF1-219ENST00000551787 DNAJC18Q9H819 358 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 AFG3L2Q9Y4W6 797 aa20.23■□□□□ 0.83
BRF1-219ENST00000551787 COL2A1P02458 1487 aaPredicted RBP20.23■□□□□ 0.83
BRF1-219ENST00000551787 CCDC85CA6NKD9 419 aa20.22■□□□□ 0.83
BRF1-219ENST00000551787 CXCL11O14625 94 aa20.22■□□□□ 0.83
BRF1-219ENST00000551787 CAP2P40123 477 aa20.22■□□□□ 0.83
BRF1-219ENST00000551787 JAG1P78504 1218 aa20.22■□□□□ 0.83
BRF1-219ENST00000551787 SHROOM1Q2M3G4 852 aaPredicted RBP20.22■□□□□ 0.83
BRF1-219ENST00000551787 SDR42E1Q8WUS8 393 aa20.22■□□□□ 0.83
BRF1-219ENST00000551787 CRNKL1Q9BZJ0 848 aaKnown RBP20.22■□□□□ 0.83
BRF1-219ENST00000551787 PDHXO00330 501 aa20.21■□□□□ 0.83
BRF1-219ENST00000551787 PRKAB2O43741 272 aa20.21■□□□□ 0.83
BRF1-219ENST00000551787 MBD4O95243 580 aa20.21■□□□□ 0.83
BRF1-219ENST00000551787 HLA-DOAP06340 250 aa20.21■□□□□ 0.83
BRF1-219ENST00000551787 IRX6P78412 446 aaPredicted RBP20.21■□□□□ 0.83
BRF1-219ENST00000551787 EVX2Q03828 476 aa20.21■□□□□ 0.83
BRF1-219ENST00000551787 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
BRF1-219ENST00000551787 GADL1Q6ZQY3 521 aa20.21■□□□□ 0.83
BRF1-219ENST00000551787 ZBTB47Q9UFB7 747 aaPredicted RBP20.21■□□□□ 0.83
BRF1-219ENST00000551787 GDF11O95390 407 aa20.2■□□□□ 0.82
BRF1-219ENST00000551787 POLR3DP05423 398 aaPredicted RBP20.2■□□□□ 0.82
BRF1-219ENST00000551787 PLCD1P51178 756 aa20.2■□□□□ 0.82
BRF1-219ENST00000551787 SP3Q02447 781 aa20.2■□□□□ 0.82
BRF1-219ENST00000551787 SPP2Q13103 211 aa20.2■□□□□ 0.82
BRF1-219ENST00000551787 GPAT2Q6NUI2 795 aa20.2■□□□□ 0.82
BRF1-219ENST00000551787 METTL16Q86W50 562 aaKnown RBP20.2■□□□□ 0.82
BRF1-219ENST00000551787 CD99L2Q8TCZ2 262 aa20.2■□□□□ 0.82
BRF1-219ENST00000551787 A0A0G2JLL6 359 aaPredicted RBP20.19■□□□□ 0.82
BRF1-219ENST00000551787 ECM2O94769 699 aaPredicted RBP20.19■□□□□ 0.82
BRF1-219ENST00000551787 CAP1Q01518 475 aa20.19■□□□□ 0.82
BRF1-219ENST00000551787 UBE3CQ15386 1083 aa20.19■□□□□ 0.82
BRF1-219ENST00000551787 B4GALNT3Q6L9W6 998 aa20.19■□□□□ 0.82
BRF1-219ENST00000551787 PRRT2Q7Z6L0 340 aaPredicted RBP20.19■□□□□ 0.82
BRF1-219ENST00000551787 ANKRD23Q86SG2 305 aa20.19■□□□□ 0.82
BRF1-219ENST00000551787 MCM9Q9NXL9 1143 aa20.19■□□□□ 0.82
BRF1-219ENST00000551787 IGHDP01880 384 aa20.18■□□□□ 0.82
BRF1-219ENST00000551787 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
BRF1-219ENST00000551787 PI4K2BQ8TCG2 481 aa20.18■□□□□ 0.82
BRF1-219ENST00000551787 GCC1Q96CN9 775 aa20.18■□□□□ 0.82
BRF1-219ENST00000551787 PUS7LQ9H0K6 701 aaKnown RBP20.18■□□□□ 0.82
BRF1-219ENST00000551787 DCP1AQ9NPI6 582 aaPredicted RBP20.18■□□□□ 0.82
BRF1-219ENST00000551787 CPA4Q9UI42 421 aa20.18■□□□□ 0.82
BRF1-219ENST00000551787 SERPINB13Q9UIV8 391 aa20.18■□□□□ 0.82
BRF1-219ENST00000551787 TRIM17Q9Y577 477 aa20.18■□□□□ 0.82
BRF1-219ENST00000551787 USP17L5A8MUK1 530 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 TLR2O60603 784 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 CYP2C8P10632 490 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 CYP2D6P10635 497 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 MX1P20591 662 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 AAMPQ13685 434 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 FASTKD5Q7L8L6 764 aaKnown RBP20.17■□□□□ 0.82
BRF1-219ENST00000551787 TTC6Q86TZ1 520 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 KBTBD3Q8NAB2 608 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 ZNF280CQ8ND82 737 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 RWDD1Q9H446 243 aaPredicted RBP20.17■□□□□ 0.82
BRF1-219ENST00000551787 ZCCHC17Q9NP64 241 aaKnown RBP20.17■□□□□ 0.82
BRF1-219ENST00000551787 TTC41PQ6P2S7 1318 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 CDK5RAP2Q96SN8 1893 aa20.17■□□□□ 0.82
BRF1-219ENST00000551787 ERO1AQ96HE7 468 aa20.16■□□□□ 0.82
BRF1-219ENST00000551787 LAMB1P07942 1786 aa20.16■□□□□ 0.82
BRF1-219ENST00000551787 CYP2D7A0A087X1C5 515 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 SMIM22K7EJ46 135 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 ERC2O15083 957 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 GLRX3O76003 335 aaKnown RBP20.15■□□□□ 0.82
BRF1-219ENST00000551787 GH2P01242 217 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 ASNSP08243 561 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 TREML2Q5T2D2 321 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 OTOP1Q7RTM1 612 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 EHD4Q9H223 541 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 ZBTB21Q9ULJ3 1066 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 SLC4A4Q9Y6R1 1079 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 SIPA1L1O43166 1804 aa20.15■□□□□ 0.82
BRF1-219ENST00000551787 RNF113AO15541 343 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms