RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 MYSM1Q5VVJ2 828 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 SYNE3Q6ZMZ3 975 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 SP8Q8IXZ3 490 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 FLAD1Q8NFF5 587 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 BICD2Q8TD16 824 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 UBAC1Q9BSL1 405 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 NUP62CLQ9H1M0 184 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 MKRN1Q9UHC7 482 aaKnown RBP13.41□□□□□ -0.26
RAB5C-208ENST00000551338 SCN9AQ15858 1988 aa13.41□□□□□ -0.26
RAB5C-208ENST00000551338 PRDM1O75626 825 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 RXRBP28702 533 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 PPP4CP60510 307 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 GSTO1P78417 241 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 DIXDC1Q155Q3 683 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 KRT40Q6A162 431 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 NBPF11Q86T75 865 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 ENAHQ8N8S7 591 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-208ENST00000551338 RNF214Q8ND24 703 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-208ENST00000551338 ZSCAN10Q96SZ4 725 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-208ENST00000551338 RTFDC1Q9BY42 306 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-208ENST00000551338 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.26
RAB5C-208ENST00000551338 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.26
RAB5C-208ENST00000551338 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 UBE2Q2LH0YL09 131 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 LDHCP07864 332 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 SRGNP10124 158 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 NPR1P16066 1061 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 SSRP1Q08945 709 aaKnown RBP13.39□□□□□ -0.27
RAB5C-208ENST00000551338 SLC26A6Q9BXS9 759 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 CLSTN2Q9H4D0 955 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 ATP6V0A2Q9Y487 856 aa13.39□□□□□ -0.27
RAB5C-208ENST00000551338 YEATS4O95619 227 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 MMP10P09238 476 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 USP17L8P0C7I0 530 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 C12orf60Q5U649 245 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 RBM43Q6ZSC3 357 aaKnown RBP13.38□□□□□ -0.27
RAB5C-208ENST00000551338 PDLIM2Q96JY6 352 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 GOLPH3LQ9H4A5 285 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 CLIC4Q9Y696 253 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 GREB1LQ9C091 1923 aaPredicted RBP13.38□□□□□ -0.27
RAB5C-208ENST00000551338 SIPA1L1O43166 1804 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 SNED1Q8TER0 1413 aa13.38□□□□□ -0.27
RAB5C-208ENST00000551338 C6orf229H3BNL8 230 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 NR1I2O75469 434 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-208ENST00000551338 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 BTDP43251 543 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 MAP3K11Q16584 847 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
RAB5C-208ENST00000551338 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 NUP133Q8WUM0 1156 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 MCM9Q9NXL9 1143 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 GAKO14976 1311 aa13.37□□□□□ -0.27
RAB5C-208ENST00000551338 GPR75-ASB3A0A0A6YYF3 556 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 CCDC196A0A1B0GTZ2 297 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 DDAH1O94760 285 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 DEXIO95424 95 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 BAG3O95817 575 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 SLC3A2P08195 630 aaKnown RBP13.36□□□□□ -0.27
RAB5C-208ENST00000551338 PDE6BP35913 854 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 USP5P45974 858 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 FUT2Q10981 343 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 STK38Q15208 465 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 MFSD14BQ5SR56 506 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 IFIT1BQ5T764 474 aaKnown RBP13.36□□□□□ -0.27
RAB5C-208ENST00000551338 ANO1Q5XXA6 986 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 OLFM4Q6UX06 510 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 IQCA1Q86XH1 822 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-208ENST00000551338 TBC1D22AQ8WUA7 517 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 WASF1Q92558 559 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 NOL10Q9BSC4 688 aaKnown RBP13.36□□□□□ -0.27
RAB5C-208ENST00000551338 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-208ENST00000551338 TNMDQ9H2S6 317 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 ANO8Q9HCE9 1232 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-208ENST00000551338 RGS17Q9UGC6 210 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-208ENST00000551338 PCDHA7Q9UN72 937 aa13.36□□□□□ -0.27
RAB5C-208ENST00000551338 MYH4Q9Y623 1939 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 U2AF2P26368 475 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAB5C-208ENST00000551338 PDE4BQ07343 736 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 TROAPQ12815 778 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 TRIM29Q14134 588 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 PPP2R5BQ15173 497 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 CAMK4Q16566 473 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 FAM47AQ5JRC9 791 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 CERS3Q8IU89 383 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 TRIM22Q8IYM9 498 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
RAB5C-208ENST00000551338 FAM43AQ8N2R8 423 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 ENGASEQ8NFI3 743 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms