RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CTU1Q7Z7A3 348 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-211ENST00000551063 CFHR5Q9BXR6 569 aa18.62■□□□□ 0.57
PRPF40B-211ENST00000551063 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.62■□□□□ 0.575e-6■■■□□ 17
PRPF40B-211ENST00000551063 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
PRPF40B-211ENST00000551063 CTNND1O60716 968 aaKnown RBP18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 ZFYP08048 801 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 IRX6P78412 446 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 LRRFIP1Q32MZ4 808 aaKnown RBP18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 METTL16Q86W50 562 aaKnown RBP18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 IFNL1Q8IU54 200 aa18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 FOXP4Q8IVH2 680 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 LCORLQ8N3X6 602 aa18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 MS4A4AQ96JQ5 239 aa18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 PICK1Q9NRD5 415 aa18.61■□□□□ 0.57
PRPF40B-211ENST00000551063 IRF6O14896 467 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 MBD4O95243 580 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 NUCB1Q02818 461 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 SNAPC2Q13487 334 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 OTUD7BQ6GQQ9 843 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 CHD1LQ86WJ1 897 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 LNPKQ9C0E8 428 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 EHD4Q9H223 541 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 PALD1Q9ULE6 856 aa18.6■□□□□ 0.57
PRPF40B-211ENST00000551063 CCL15-CCL14A0A0B4J2E2 113 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 FAM196BA6NMK8 535 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 IGF2BP3O00425 579 aaKnown RBP eCLIP18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 TBC1D8O95759 1140 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 SLURP2P0DP57 97 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 PDE1AP54750 535 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 CCL15Q16663 113 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 NOM1Q5C9Z4 860 aaKnown RBP18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 TTC6Q86TZ1 520 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 BRI3BPQ8WY22 251 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 SAP30BPQ9UHR5 308 aaKnown RBP18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 KCNH4Q9UQ05 1017 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 LAMB1P07942 1786 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 AK9Q5TCS8 1911 aa18.59■□□□□ 0.57
PRPF40B-211ENST00000551063 CETPP11597 493 aa18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 PKN2Q16513 984 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 SLFNL1Q499Z3 407 aa18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 B4GALNT3Q6L9W6 998 aa18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 APPBP2Q92624 585 aa18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 TRIM34Q9BYJ4 488 aa18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 DNAJC18Q9H819 358 aa18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 FOCADQ5VW36 1801 aa18.58■□□□□ 0.56
PRPF40B-211ENST00000551063 RNF113AO15541 343 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 CHGBP05060 677 aa18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 PTPRAP18433 802 aa18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 ZNF296Q8WUU4 475 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 PTPN18Q99952 460 aa18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 PUS7LQ9H0K6 701 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 ZCCHC17Q9NP64 241 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 DCP1AQ9NPI6 582 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 ATP8A2Q9NTI2 1148 aa18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 GINM1Q9NU53 330 aa18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 TAOK2Q9UL54 1235 aa18.57■□□□□ 0.56
PRPF40B-211ENST00000551063 GPR25O00155 361 aa18.56■□□□□ 0.56
PRPF40B-211ENST00000551063 CXCL11O14625 94 aa18.56■□□□□ 0.56
PRPF40B-211ENST00000551063 CAP2P40123 477 aa18.56■□□□□ 0.56
PRPF40B-211ENST00000551063 SDR42E1Q8WUS8 393 aa18.56■□□□□ 0.56
PRPF40B-211ENST00000551063 FSD1Q9BTV5 496 aa18.56■□□□□ 0.56
PRPF40B-211ENST00000551063 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
PRPF40B-211ENST00000551063 MCM9Q9NXL9 1143 aa18.56■□□□□ 0.56
PRPF40B-211ENST00000551063 SERPINB13Q9UIV8 391 aa18.56■□□□□ 0.56
PRPF40B-211ENST00000551063 DDX60LQ5H9U9 1706 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-211ENST00000551063 CDK5RAP2Q96SN8 1893 aa18.55■□□□□ 0.56
PRPF40B-211ENST00000551063 POLR3DP05423 398 aaPredicted RBP18.55■□□□□ 0.56
PRPF40B-211ENST00000551063 TICAM2Q86XR7 235 aa18.55■□□□□ 0.56
PRPF40B-211ENST00000551063 EVI5LQ96CN4 794 aa18.55■□□□□ 0.56
PRPF40B-211ENST00000551063 OSBPL3Q9H4L5 887 aa18.55■□□□□ 0.56
PRPF40B-211ENST00000551063 ZHX2Q9Y6X8 837 aa18.55■□□□□ 0.56
PRPF40B-211ENST00000551063 SIPA1L1O43166 1804 aa18.55■□□□□ 0.56
PRPF40B-211ENST00000551063 PRKAB2O43741 272 aa18.54■□□□□ 0.56
PRPF40B-211ENST00000551063 ASNSP08243 561 aa18.54■□□□□ 0.56
PRPF40B-211ENST00000551063 RRP1BQ14684 758 aaKnown RBP18.54■□□□□ 0.56
PRPF40B-211ENST00000551063 SLC4A8Q2Y0W8 1093 aa18.54■□□□□ 0.56
PRPF40B-211ENST00000551063 OSBP2Q969R2 916 aa18.54■□□□□ 0.56
PRPF40B-211ENST00000551063 DDRGK1Q96HY6 314 aa18.54■□□□□ 0.56
PRPF40B-211ENST00000551063 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
PRPF40B-211ENST00000551063 A0A0G2JLL6 359 aaPredicted RBP18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 FKTNO75072 461 aa18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 DOCK1Q14185 1865 aa18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 TATDN1Q6P1N9 297 aa18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 PRRT2Q7Z6L0 340 aaPredicted RBP18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 PLEKHM2Q8IWE5 1019 aa18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 FAM43AQ8N2R8 423 aa18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 SLC4A4Q9Y6R1 1079 aa18.53■□□□□ 0.56
PRPF40B-211ENST00000551063 BTBD19C9JJ37 291 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 GPAA1O43292 621 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 GNAT2P19087 354 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 PLCD1P51178 756 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 GABPAQ06546 454 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 MOGSQ13724 837 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 ZMYM1Q5SVZ6 1142 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 GIMAP6Q6P9H5 292 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 ANKRD23Q86SG2 305 aa18.52■□□□□ 0.56
PRPF40B-211ENST00000551063 AMOTL1Q8IY63 956 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms