RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-218	ENST00000550692	PI4KB	Q9UBF8	816 aa		13.63	□□□□□ -0.23
BRF1-218	ENST00000550692	SAP30BP	Q9UHR5	308 aa	Known RBP	13.63	□□□□□ -0.23
BRF1-218	ENST00000550692	PALD1	Q9ULE6	856 aa		13.63	□□□□□ -0.23
BRF1-218	ENST00000550692	FOCAD	Q5VW36	1801 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	MAGEB6P1	A0A0J9YX57	407 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	CTNND1	O60716	968 aa	Known RBP	13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	CETP	P11597	493 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	PTPRA	P18433	802 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	USP5	P45974	858 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	SNAPC2	Q13487	334 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	RRP1B	Q14684	758 aa	Known RBP	13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	SLC4A8	Q2Y0W8	1093 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	CERS3	Q8IU89	383 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	ZHX2	Q9Y6X8	837 aa		13.62	□□□□□ -0.23
BRF1-218	ENST00000550692	IGHD	P01880	384 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	ADD2	P35612	726 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	CRHR2	Q13324	411 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	DGKZ	Q13574	1117 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	NOM1	Q5C9Z4	860 aa	Known RBP	13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	ANKRD45	Q5TZF3	282 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	CCDC84	Q86UT8	332 aa	Predicted RBP	13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	GCC1	Q96CN9	775 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	GPATCH3	Q96I76	525 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	PICK1	Q9NRD5	415 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	HERC5	Q9UII4	1024 aa	Known RBP	13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	KCNH4	Q9UQ05	1017 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	GTF3C3	Q9Y5Q9	886 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	SIPA1L1	O43166	1804 aa		13.61	□□□□□ -0.23
BRF1-218	ENST00000550692	CCDC85C	A6NKD9	419 aa		13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	BTBD19	C9JJ37	291 aa		13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	METTL16	Q86W50	562 aa	Known RBP	13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	LCORL	Q8N3X6	602 aa		13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	MCOLN1	Q9GZU1	580 aa		13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	DNAJC18	Q9H819	358 aa		13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	MYH1	P12882	1939 aa		13.6	□□□□□ -0.23
BRF1-218	ENST00000550692	DOCK1	Q14185	1865 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	CXCL11	O14625	94 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	FKTN	O75072	461 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	HLA-DOA	P06340	250 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	CAP2	P40123	477 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	MOGS	Q13724	837 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	TAF1C	Q15572	869 aa	Predicted RBP	13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	ARMT1	Q9H993	441 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	AFG3L2	Q9Y4W6	797 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	TTC41P	Q6P2S7	1318 aa		13.59	□□□□□ -0.23
BRF1-218	ENST00000550692	PRKAB2	O43741	272 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	MBD4	O95243	580 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	JAG1	P78504	1218 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	UBE3C	Q15386	1083 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	CTU1	Q7Z7A3	348 aa	Known RBP	13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	SMC5	Q8IY18	1101 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	KBTBD3	Q8NAB2	608 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	PI4K2B	Q8TCG2	481 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	SDR42E1	Q8WUS8	393 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	MYH7	P12883	1935 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	SALL3	Q9BXA9	1300 aa		13.58	□□□□□ -0.24
BRF1-218	ENST00000550692	PHIP	Q8WWQ0	1821 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	TRIM75P	A6NK02	468 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	MX1	P20591	662 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	PLCD1	P51178	756 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	B4GALNT3	Q6L9W6	998 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	ZSCAN25	Q6NSZ9	544 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	GPAT2	Q6NUI2	795 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	ANKRD23	Q86SG2	305 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	TRIM34	Q9BYJ4	488 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	PUS7L	Q9H0K6	701 aa	Known RBP	13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	ZFYVE28	Q9HCC9	887 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	SERPINB13	Q9UIV8	391 aa		13.57	□□□□□ -0.24
BRF1-218	ENST00000550692	ATAD5	Q96QE3	1844 aa		13.56	□□□□□ -0.24
BRF1-218	ENST00000550692		A0A0G2JLL6	359 aa	Predicted RBP	13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	PDHX	O00330	501 aa		13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	ERC2	O15083	957 aa		13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	GLRX3	O76003	335 aa	Known RBP	13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	GDF11	O95390	407 aa		13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	POLR3D	P05423	398 aa	Predicted RBP	13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	EVX2	Q03828	476 aa		13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	SPP2	Q13103	211 aa		13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	TTC6	Q86TZ1	520 aa		13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	ZCCHC17	Q9NP64	241 aa	Known RBP	13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	MCM9	Q9NXL9	1143 aa		13.56	□□□□□ -0.24
BRF1-218	ENST00000550692	PTPRF	P10586	1907 aa		13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	USP17L5	A8MUK1	530 aa		13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	TLR2	O60603	784 aa		13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	CYP2D6	P10635	497 aa		13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	SP3	Q02447	781 aa		13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	FASTKD5	Q7L8L6	764 aa	Known RBP	13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	ZNF280C	Q8ND82	737 aa		13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	CD99L2	Q8TCZ2	262 aa		13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	LNPK	Q9C0E8	428 aa		13.55	□□□□□ -0.24
BRF1-218	ENST00000550692	EHD4	Q9H223	541 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms