RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 PLXNB2O15031 1838 aa18.65■□□□□ 0.58
SVOP-203ENST00000550436 A0A1B0GUL7 405 aa18.64■□□□□ 0.57
SVOP-203ENST00000550436 CT47B1P0C2W7 299 aaPredicted RBP18.64■□□□□ 0.57
SVOP-203ENST00000550436 HMGCS2P54868 508 aa18.64■□□□□ 0.57
SVOP-203ENST00000550436 COA7Q96BR5 231 aa18.64■□□□□ 0.57
SVOP-203ENST00000550436 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.64■□□□□ 0.57
SVOP-203ENST00000550436 ZMYND8Q9ULU4 1186 aaPredicted RBP18.64■□□□□ 0.57
SVOP-203ENST00000550436 LOC285556D6RIA3 1793 aa18.63■□□□□ 0.57
SVOP-203ENST00000550436 MNX1P50219 401 aaPredicted RBP18.63■□□□□ 0.57
SVOP-203ENST00000550436 FAM110CQ1W6H9 321 aa18.63■□□□□ 0.57
SVOP-203ENST00000550436 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
SVOP-203ENST00000550436 SLC17A8Q8NDX2 589 aa18.63■□□□□ 0.57
SVOP-203ENST00000550436 HMG20BQ9P0W2 317 aa18.63■□□□□ 0.57
SVOP-203ENST00000550436 GJD2Q9UKL4 321 aa18.63■□□□□ 0.57
SVOP-203ENST00000550436 ZBTB22O15209 634 aa18.62■□□□□ 0.57
SVOP-203ENST00000550436 TBC1D12O60347 775 aa18.62■□□□□ 0.57
SVOP-203ENST00000550436 JAG1P78504 1218 aa18.62■□□□□ 0.57
SVOP-203ENST00000550436 C7orf61Q8IZ16 206 aa18.62■□□□□ 0.57
SVOP-203ENST00000550436 CUL9Q8IWT3 2517 aa18.62■□□□□ 0.57
SVOP-203ENST00000550436 LAMA3Q16787 3333 aa18.61■□□□□ 0.57
SVOP-203ENST00000550436 SIPA1L1O43166 1804 aa18.61■□□□□ 0.57
SVOP-203ENST00000550436 PDS5AQ29RF7 1337 aaKnown RBP18.61■□□□□ 0.57
SVOP-203ENST00000550436 DLL1O00548 723 aa18.61■□□□□ 0.57
SVOP-203ENST00000550436 RARSP54136 660 aaKnown RBP18.61■□□□□ 0.57
SVOP-203ENST00000550436 SHROOM1Q2M3G4 852 aaPredicted RBP18.61■□□□□ 0.57
SVOP-203ENST00000550436 SPTY2D1Q68D10 685 aaPredicted RBP18.61■□□□□ 0.57
SVOP-203ENST00000550436 NECAB2Q7Z6G3 386 aa18.61■□□□□ 0.57
SVOP-203ENST00000550436 SLF2Q8IX21 1173 aa18.61■□□□□ 0.57
SVOP-203ENST00000550436 ZNF280CQ8ND82 737 aa18.61■□□□□ 0.57
SVOP-203ENST00000550436 NSUN4Q96CB9 384 aaKnown RBP18.61■□□□□ 0.57
SVOP-203ENST00000550436 NEUROD6Q96NK8 337 aa18.61■□□□□ 0.57
SVOP-203ENST00000550436 ASCC2Q9H1I8 757 aaPredicted RBP18.61■□□□□ 0.57
SVOP-203ENST00000550436 DDX60LQ5H9U9 1706 aaKnown RBP18.6■□□□□ 0.57
SVOP-203ENST00000550436 SYN1P17600 705 aa18.6■□□□□ 0.57
SVOP-203ENST00000550436 CAP2P40123 477 aa18.6■□□□□ 0.57
SVOP-203ENST00000550436 PROCA1Q8NCQ7 364 aaPredicted RBP18.6■□□□□ 0.57
SVOP-203ENST00000550436 GDF15Q99988 308 aa18.6■□□□□ 0.57
SVOP-203ENST00000550436 OSBPL5Q9H0X9 879 aaPredicted RBP18.6■□□□□ 0.57
SVOP-203ENST00000550436 ZBED9Q6R2W3 1325 aa18.59■□□□□ 0.57
SVOP-203ENST00000550436 SRGAP3O43295 1099 aa18.59■□□□□ 0.57
SVOP-203ENST00000550436 HMGCRP04035 888 aa18.59■□□□□ 0.57
SVOP-203ENST00000550436 SH3RF3Q8TEJ3 882 aaPredicted RBP18.59■□□□□ 0.57
SVOP-203ENST00000550436 TRIB2Q92519 343 aa18.59■□□□□ 0.57
SVOP-203ENST00000550436 RAI14Q9P0K7 980 aa18.59■□□□□ 0.57
SVOP-203ENST00000550436 PNMA3Q9UL41 463 aa18.59■□□□□ 0.57
SVOP-203ENST00000550436 TNNQ9UQP3 1299 aa18.59■□□□□ 0.57
SVOP-203ENST00000550436 COL6A3P12111 3177 aa18.58■□□□□ 0.57
SVOP-203ENST00000550436 A0A1W2PPC1 479 aa18.58■□□□□ 0.56
SVOP-203ENST00000550436 CYP2B6P20813 491 aa18.58■□□□□ 0.56
SVOP-203ENST00000550436 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.56
SVOP-203ENST00000550436 Q7L0L9 218 aa18.58■□□□□ 0.56
SVOP-203ENST00000550436 SPATA5Q8NB90 893 aa18.58■□□□□ 0.56
SVOP-203ENST00000550436 MYO5AQ9Y4I1 1855 aaKnown RBP18.58■□□□□ 0.56
SVOP-203ENST00000550436 CDK5RAP2Q96SN8 1893 aa18.57■□□□□ 0.56
SVOP-203ENST00000550436 USP17L5A8MUK1 530 aa18.57■□□□□ 0.56
SVOP-203ENST00000550436 NPM3O75607 178 aaKnown RBP18.57■□□□□ 0.56
SVOP-203ENST00000550436 GCLCP48506 637 aaPredicted RBP18.57■□□□□ 0.56
SVOP-203ENST00000550436 TEX11Q8IYF3 940 aa18.57■□□□□ 0.56
SVOP-203ENST00000550436 P2RX7Q99572 595 aaKnown RBP18.57■□□□□ 0.56
SVOP-203ENST00000550436 API5Q9BZZ5 524 aaKnown RBP18.57■□□□□ 0.56
SVOP-203ENST00000550436 TXNRD2Q9NNW7 524 aa18.57■□□□□ 0.56
SVOP-203ENST00000550436 RPTORQ8N122 1335 aa18.56■□□□□ 0.56
SVOP-203ENST00000550436 MCAMP43121 646 aa18.56■□□□□ 0.56
SVOP-203ENST00000550436 MTMR2Q13614 643 aa18.56■□□□□ 0.56
SVOP-203ENST00000550436 SH3D19Q5HYK7 790 aa18.56■□□□□ 0.56
SVOP-203ENST00000550436 HMX1Q9NP08 348 aaPredicted RBP18.56■□□□□ 0.56
SVOP-203ENST00000550436 SNRKQ9NRH2 765 aa18.56■□□□□ 0.56
SVOP-203ENST00000550436 AKAP2Q9Y2D5 859 aa18.56■□□□□ 0.56
SVOP-203ENST00000550436 LDHCP07864 332 aa18.55■□□□□ 0.56
SVOP-203ENST00000550436 MAGEA10P43363 369 aaPredicted RBP18.55■□□□□ 0.56
SVOP-203ENST00000550436 POTEEQ6S8J3 1075 aa18.55■□□□□ 0.56
SVOP-203ENST00000550436 NBPF3Q9H094 633 aa18.55■□□□□ 0.56
SVOP-203ENST00000550436 DNAJC18Q9H819 358 aa18.55■□□□□ 0.56
SVOP-203ENST00000550436 MORF4L1Q9UBU8 362 aa18.55■□□□□ 0.56
SVOP-203ENST00000550436 PFASO15067 1338 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 COL2A1P02458 1487 aaPredicted RBP18.54■□□□□ 0.56
SVOP-203ENST00000550436 BCAR3O75815 825 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 ARID4AP29374 1257 aaPredicted RBP18.54■□□□□ 0.56
SVOP-203ENST00000550436 BMP8BP34820 402 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 GSTO1P78417 241 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 Q3C1V9 767 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 GORABQ5T7V8 394 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 ADGRA1Q86SQ6 560 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 MAPKAPK5Q8IW41 473 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 ANKLE1Q8NAG6 615 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 C11orf49Q9H6J7 331 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 AATFQ9NY61 560 aaKnown RBP eCLIP18.54■□□□□ 0.56
SVOP-203ENST00000550436 OGDHLQ9ULD0 1010 aa18.54■□□□□ 0.56
SVOP-203ENST00000550436 PNMA6EA0A0J9YXQ4 647 aa18.53■□□□□ 0.56
SVOP-203ENST00000550436 GDF11O95390 407 aa18.53■□□□□ 0.56
SVOP-203ENST00000550436 PRKAR2AP13861 404 aaKnown RBP18.53■□□□□ 0.56
SVOP-203ENST00000550436 PABPC4Q13310 644 aaKnown RBP eCLIP18.53■□□□□ 0.56
SVOP-203ENST00000550436 MTX1Q13505 466 aa18.53■□□□□ 0.56
SVOP-203ENST00000550436 CCL14Q16627 93 aa18.53■□□□□ 0.56
SVOP-203ENST00000550436 WDR18Q9BV38 432 aa18.53■□□□□ 0.56
SVOP-203ENST00000550436 LRP2BPQ9P2M1 347 aa18.53■□□□□ 0.56
SVOP-203ENST00000550436 RBPJLQ9UBG7 517 aa18.53■□□□□ 0.56
SVOP-203ENST00000550436 A0A0C4DFX4 3053 aa18.53■□□□□ 0.56
SVOP-203ENST00000550436 CAPN2P17655 700 aa18.52■□□□□ 0.56
SVOP-203ENST00000550436 BACE1P56817 501 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms