RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 TIAM2Q8IVF5 1701 aa24.36■■□□□ 1.49
PRDM4-205ENST00000550376 GTF2IP78347 998 aa24.36■■□□□ 1.49
PRDM4-205ENST00000550376 IFIT1BQ5T764 474 aaKnown RBP24.36■■□□□ 1.49
PRDM4-205ENST00000550376 MYSM1Q5VVJ2 828 aa24.36■■□□□ 1.49
PRDM4-205ENST00000550376 UTRNP46939 3433 aa24.36■■□□□ 1.49
PRDM4-205ENST00000550376 DOK7Q18PE1 504 aa24.36■■□□□ 1.49
PRDM4-205ENST00000550376 SLC44A5Q8NCS7 719 aa24.36■■□□□ 1.49
PRDM4-205ENST00000550376 TNMDQ9H2S6 317 aa24.36■■□□□ 1.49
PRDM4-205ENST00000550376 RRAGDQ9NQL2 400 aaPredicted RBP24.36■■□□□ 1.49
PRDM4-205ENST00000550376 FUCA2Q9BTY2 467 aa24.35■■□□□ 1.49
PRDM4-205ENST00000550376 PCDHA7Q9UN72 937 aa24.35■■□□□ 1.49
PRDM4-205ENST00000550376 ZNF622Q969S3 477 aaKnown RBP eCLIP24.35■■□□□ 1.49
PRDM4-205ENST00000550376 RGS17Q9UGC6 210 aaPredicted RBP24.35■■□□□ 1.49
PRDM4-205ENST00000550376 FMNL1O95466 1100 aaPredicted RBP24.34■■□□□ 1.49
PRDM4-205ENST00000550376 IL1R1P14778 569 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 IFNAR1P17181 557 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 PLCD1P51178 756 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 GNL2Q13823 731 aaKnown RBP24.34■■□□□ 1.49
PRDM4-205ENST00000550376 NBPF11Q86T75 865 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 PIBF1Q8WXW3 757 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 ERCC4Q92889 916 aaPredicted RBP24.34■■□□□ 1.49
PRDM4-205ENST00000550376 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.34■■□□□ 1.49
PRDM4-205ENST00000550376 LETM1O95202 739 aaPredicted RBP24.34■■□□□ 1.49
PRDM4-205ENST00000550376 BTDP43251 543 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 POTEAQ6S8J7 498 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 C15orf52Q6ZUT6 534 aaKnown RBP24.34■■□□□ 1.49
PRDM4-205ENST00000550376 IQCA1Q86XH1 822 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 CRACR2BQ8N4Y2 399 aaPredicted RBP24.34■■□□□ 1.49
PRDM4-205ENST00000550376 MPNDQ8N594 471 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 PODXL2Q9NZ53 605 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 PARP3Q9Y6F1 533 aa24.34■■□□□ 1.49
PRDM4-205ENST00000550376 A0A087WWV3 80 aa24.33■■□□□ 1.49
PRDM4-205ENST00000550376 PLEKHA8P1O95397 391 aa24.33■■□□□ 1.49
PRDM4-205ENST00000550376 MARCKSP29966 332 aaPredicted RBP24.33■■□□□ 1.49
PRDM4-205ENST00000550376 EN1Q05925 392 aaPredicted RBP24.33■■□□□ 1.49
PRDM4-205ENST00000550376 CCDC173Q0VFZ6 552 aa24.33■■□□□ 1.49
PRDM4-205ENST00000550376 STK38Q15208 465 aa24.33■■□□□ 1.49
PRDM4-205ENST00000550376 TMTC2Q8N394 836 aa24.33■■□□□ 1.49
PRDM4-205ENST00000550376 ANO8Q9HCE9 1232 aaPredicted RBP24.33■■□□□ 1.49
PRDM4-205ENST00000550376 MKRN1Q9UHC7 482 aaKnown RBP24.33■■□□□ 1.49
PRDM4-205ENST00000550376 FGRP09769 529 aa24.33■■□□□ 1.48
PRDM4-205ENST00000550376 MAP3K11Q16584 847 aa24.33■■□□□ 1.48
PRDM4-205ENST00000550376 SP8Q8IXZ3 490 aa24.33■■□□□ 1.48
PRDM4-205ENST00000550376 LINC00301Q8NCQ3 95 aa24.33■■□□□ 1.48
PRDM4-205ENST00000550376 TRIM44Q96DX7 344 aaPredicted RBP24.33■■□□□ 1.48
PRDM4-205ENST00000550376 RTFDC1Q9BY42 306 aaPredicted RBP24.33■■□□□ 1.48
PRDM4-205ENST00000550376 ATP6V0A2Q9Y487 856 aa24.33■■□□□ 1.48
PRDM4-205ENST00000550376 TSPY2A6NKD2 308 aa24.32■■□□□ 1.48
PRDM4-205ENST00000550376 SF3A1Q15459 793 aaKnown RBP24.32■■□□□ 1.48
PRDM4-205ENST00000550376 EZH2Q15910 746 aaKnown RBP24.32■■□□□ 1.48
PRDM4-205ENST00000550376 PPP1R9BQ96SB3 815 aa24.32■■□□□ 1.48
PRDM4-205ENST00000550376 RTEL1Q9NZ71 1219 aa24.32■■□□□ 1.48
PRDM4-205ENST00000550376 MTMR7Q9Y216 660 aa24.32■■□□□ 1.48
PRDM4-205ENST00000550376 BAZ2BQ9UIF8 2168 aaKnown RBP24.32■■□□□ 1.48
PRDM4-205ENST00000550376 A0A1B0GVL5 298 aa24.32■■□□□ 1.48
PRDM4-205ENST00000550376 BTBD18B2RXH4 712 aa24.32■■□□□ 1.48
PRDM4-205ENST00000550376 TRIM29Q14134 588 aa24.31■■□□□ 1.48
PRDM4-205ENST00000550376 ARPP21Q9UBL0 812 aaPredicted RBP24.31■■□□□ 1.48
PRDM4-205ENST00000550376 MROH7-TTC4A0A0A0MT08 1334 aa24.31■■□□□ 1.48
PRDM4-205ENST00000550376 BAG3O95817 575 aa24.31■■□□□ 1.48
PRDM4-205ENST00000550376 PLCB2Q00722 1185 aa24.31■■□□□ 1.48
PRDM4-205ENST00000550376 C12orf60Q5U649 245 aa24.31■■□□□ 1.48
PRDM4-205ENST00000550376 FSIP1Q8NA03 581 aa24.31■■□□□ 1.48
PRDM4-205ENST00000550376 PDGFDQ9GZP0 370 aaPredicted RBP24.31■■□□□ 1.48
PRDM4-205ENST00000550376 KCNQ5Q9NR82 932 aa24.31■■□□□ 1.48
PRDM4-205ENST00000550376 DUOX1Q9NRD9 1551 aa24.31■■□□□ 1.48
PRDM4-205ENST00000550376 TFAP4Q01664 338 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 CATIPQ7Z7H3 387 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 CLSTN2Q9H4D0 955 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 GSTO1P78417 241 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 TROAPQ12815 778 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 SNW1Q13573 536 aaKnown RBP24.3■■□□□ 1.48
PRDM4-205ENST00000550376 BRAPQ7Z569 592 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 TRIM22Q8IYM9 498 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 SHISA4Q96DD7 197 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 USP25Q9UHP3 1055 aa24.3■■□□□ 1.48
PRDM4-205ENST00000550376 V9GY48 417 aaPredicted RBP24.3■■□□□ 1.48
PRDM4-205ENST00000550376 USP17L3A6NCW0 530 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 USP17L4A6NCW7 530 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 NPR1P16066 1061 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 NR5A1Q13285 461 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 SBK1Q52WX2 424 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 ANO1Q5XXA6 986 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 USP17L1Q7RTZ2 530 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 NOL10Q9BSC4 688 aaKnown RBP24.29■■□□□ 1.48
PRDM4-205ENST00000550376 PDE4BQ07343 736 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 OXER1Q8TDS5 423 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.29■■□□□ 1.48
PRDM4-205ENST00000550376 ZC3H12CQ9C0D7 883 aaKnown RBP24.29■■□□□ 1.48
PRDM4-205ENST00000550376 DDX19AQ9NUU7 478 aaKnown RBP24.29■■□□□ 1.48
PRDM4-205ENST00000550376 CCDC88AQ3V6T2 1871 aa24.29■■□□□ 1.48
PRDM4-205ENST00000550376 SPTLC2O15270 562 aa24.28■■□□□ 1.48
PRDM4-205ENST00000550376 CHRNA5P30532 468 aa24.28■■□□□ 1.48
PRDM4-205ENST00000550376 DPP8Q6V1X1 898 aaPredicted RBP24.28■■□□□ 1.48
PRDM4-205ENST00000550376 IL17RBQ9NRM6 502 aa24.28■■□□□ 1.48
PRDM4-205ENST00000550376 ORC4O43929 436 aa24.28■■□□□ 1.48
PRDM4-205ENST00000550376 SLC3A2P08195 630 aaKnown RBP24.28■■□□□ 1.48
PRDM4-205ENST00000550376 TYRO3Q06418 890 aa24.28■■□□□ 1.48
PRDM4-205ENST00000550376 MKNK2Q9HBH9 465 aa24.28■■□□□ 1.48
PRDM4-205ENST00000550376 ANKRD31Q8N7Z5 1873 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms