RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 CRACR2BQ8N4Y2 399 aaPredicted RBP9.64□□□□□ -0.87
GPN3-207ENST00000550228 NCOA7Q8NI08 942 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 STAG1Q8WVM7 1258 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 FAM151AQ8WW52 585 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 TCEANC2Q96MN5 208 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 NEK1Q96PY6 1258 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 RNF41Q9H4P4 317 aaPredicted RBP9.64□□□□□ -0.87
GPN3-207ENST00000550228 ANAPC4Q9UJX5 808 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 COL2A1P02458 1487 aaPredicted RBP9.64□□□□□ -0.87
GPN3-207ENST00000550228 ROBO3Q96MS0 1386 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 POTECB2RU33 542 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 KDM4AO75164 1064 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 SLURP2P0DP57 97 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 ANP32AP39687 249 aaKnown RBP9.63□□□□□ -0.87
GPN3-207ENST00000550228 NEK4P51957 841 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 PDE4BQ07343 736 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 RASA3Q14644 834 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 FKBP1CQ5VVH2 108 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 USP50Q70EL3 339 aaPredicted RBP9.63□□□□□ -0.87
GPN3-207ENST00000550228 NOL8Q76FK4 1167 aaKnown RBP9.63□□□□□ -0.87
GPN3-207ENST00000550228 CHST3Q7LGC8 479 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 FAM83AQ86UY5 434 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 APOBEC3FQ8IUX4 373 aaKnown RBP9.63□□□□□ -0.87
GPN3-207ENST00000550228 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 IL17RAQ96F46 866 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 CSRNP1Q96S65 589 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 LRRC2Q9BYS8 371 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 KRT23Q9C075 422 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 DHX36Q9H2U1 1008 aaKnown RBP9.63□□□□□ -0.87
GPN3-207ENST00000550228 TAF1DQ9H5J8 278 aaPredicted RBP9.63□□□□□ -0.87
GPN3-207ENST00000550228 RRAGCQ9HB90 399 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.63□□□□□ -0.87
GPN3-207ENST00000550228 CYP46A1Q9Y6A2 500 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 ATRNL1Q5VV63 1379 aa9.63□□□□□ -0.87
GPN3-207ENST00000550228 PRC1O43663 620 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 RANBP6O60518 1105 aaKnown RBP9.62□□□□□ -0.87
GPN3-207ENST00000550228 RPS6KB1P23443 525 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 CDK8P49336 464 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 FAM47AQ5JRC9 791 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 C16orf86Q6ZW13 317 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 RUFY3Q7L099 469 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 CYB5R4Q7L1T6 521 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 MB21D2Q8IYB1 491 aaPredicted RBP9.62□□□□□ -0.87
GPN3-207ENST00000550228 ESR2Q92731 530 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 DCPSQ96C86 337 aaKnown RBP9.62□□□□□ -0.87
GPN3-207ENST00000550228 TM6SF1Q9BZW5 370 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 CNNM2Q9H8M5 875 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 MKNK2Q9HBH9 465 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 ZSWIM6Q9HCJ5 1215 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 PDRG1Q9NUG6 133 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 SERPINB13Q9UIV8 391 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 CLEC11AQ9Y240 323 aa9.62□□□□□ -0.87
GPN3-207ENST00000550228 GOLGB1Q14789 3259 aaKnown RBP9.62□□□□□ -0.87
GPN3-207ENST00000550228 ADM5C9JUS6 153 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 ORC4O43929 436 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 ST18O60284 1047 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 HMGB1P09429 215 aaKnown RBP9.61□□□□□ -0.87
GPN3-207ENST00000550228 POTEIP0CG38 1075 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 POTEJP0CG39 1038 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 ANTXR2P58335 489 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 FGD1P98174 961 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 PRAMEF18Q5VWM3 479 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 DHX32Q7L7V1 743 aaKnown RBP9.61□□□□□ -0.87
GPN3-207ENST00000550228 SULF1Q8IWU6 871 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 ZKSCAN3Q9BRR0 538 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 DEFB129Q9H1M3 183 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 EHD4Q9H223 541 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 NMRK2Q9NPI5 230 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 PI4KBQ9UBF8 816 aa9.61□□□□□ -0.87
GPN3-207ENST00000550228 PITPNM2Q9BZ72 1349 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 TSPY2A6NKD2 308 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 CD2BP2O95400 341 aaKnown RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 FGRP09769 529 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 PCP11498 1178 aaKnown RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 VEGFAP15692 232 aaPredicted RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 RASA1P20936 1047 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 MCM5P33992 734 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 SHMT1P34896 483 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 AK2P54819 239 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 GABPAQ06546 454 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 NBPF12Q5TAG4 269 aaPredicted RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 DLK2Q6UY11 383 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 Q6ZUG5 572 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 MIGA2Q7L4E1 593 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 KRT26Q7Z3Y9 468 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 PNMA8AQ86V59 439 aaPredicted RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 FOXP4Q8IVH2 680 aaPredicted RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 HSCBQ8IWL3 235 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 ZNF444Q8N0Y2 327 aaPredicted RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 TEPSINQ96N21 525 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 TTC14Q96N46 770 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 LARP6Q9BRS8 491 aaKnown RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 DNAJC18Q9H819 358 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.6□□□□□ -0.87
GPN3-207ENST00000550228 ZNF287Q9HBT7 754 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 GPHNQ9NQX3 736 aaPredicted RBP9.6□□□□□ -0.87
GPN3-207ENST00000550228 SWAP70Q9UH65 585 aa9.6□□□□□ -0.87
GPN3-207ENST00000550228 ATAD5Q96QE3 1844 aa9.59□□□□□ -0.87
GPN3-207ENST00000550228 MPHOSPH10O00566 681 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms