RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CYP7A1P22680 504 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 CAP2P40123 477 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 PSMC4P43686 418 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 FCGRTP55899 365 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 TTF1Q15361 905 aaPredicted RBP13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 GADL1Q6ZQY3 521 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 ZNF280CQ8ND82 737 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 RHPN1Q8TCX5 695 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 TGFBRAP1Q8WUH2 860 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 SRRDQ9UH36 339 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 RCAN3Q9UKA8 241 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 AGTPBP1Q9UPW5 1226 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 PTCH2Q9Y6C5 1203 aa13.26□□□□□ -0.29
VTI1BP3-201ENST00000550220 MYH2Q9UKX2 1941 aa13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 ADGRA2Q96PE1 1338 aa13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 TRIM75PA6NK02 468 aa13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 ASNSP08243 561 aa13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 CYP2C8P10632 490 aa13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 BCRP11274 1271 aa13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 PRPF38BQ5VTL8 546 aaKnown RBP13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 METTL16Q86W50 562 aaKnown RBP13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 PROCA1Q8NCQ7 364 aaPredicted RBP13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 SMCR8Q8TEV9 937 aaPredicted RBP13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 PIH1D3Q9NQM4 214 aaKnown RBP13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 ZBTB40Q9NUA8 1239 aa13.25□□□□□ -0.29
VTI1BP3-201ENST00000550220 PDE4DIPQ5VU43 2346 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 AK9Q5TCS8 1911 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 IFIT2P09913 472 aaKnown RBP13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 CAP1Q01518 475 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 SPP2Q13103 211 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 PDE3AQ14432 1141 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 MAPKAPK5Q8IW41 473 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 RAET1EQ8TD07 263 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 ARHGAP39Q9C0H5 1083 aa13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
VTI1BP3-201ENST00000550220 FLT1P17948 1338 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 C19orf81C9J6K1 198 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 CAPN2P17655 700 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 OSBPP22059 807 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 GCLCP48506 637 aaPredicted RBP13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 SH3D19Q5HYK7 790 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 TTC6Q86TZ1 520 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 MAGEB6Q8N7X4 407 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 WDR18Q9BV38 432 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
VTI1BP3-201ENST00000550220 MYPNQ86TC9 1320 aa13.22□□□□□ -0.29
VTI1BP3-201ENST00000550220 GRK4P32298 578 aa13.22□□□□□ -0.29
VTI1BP3-201ENST00000550220 USP5P45974 858 aa13.22□□□□□ -0.29
VTI1BP3-201ENST00000550220 ADGRA1Q86SQ6 560 aa13.22□□□□□ -0.29
VTI1BP3-201ENST00000550220 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
VTI1BP3-201ENST00000550220 TMOD4Q9NZQ9 345 aa13.22□□□□□ -0.29
VTI1BP3-201ENST00000550220 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
VTI1BP3-201ENST00000550220 PALD1Q9ULE6 856 aa13.22□□□□□ -0.29
VTI1BP3-201ENST00000550220 FAM196BA6NMK8 535 aa13.21□□□□□ -0.29
VTI1BP3-201ENST00000550220 BACE1P56817 501 aa13.21□□□□□ -0.29
VTI1BP3-201ENST00000550220 UBXN2AP68543 259 aa13.21□□□□□ -0.29
VTI1BP3-201ENST00000550220 FAM110CQ1W6H9 321 aa13.21□□□□□ -0.29
VTI1BP3-201ENST00000550220 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
VTI1BP3-201ENST00000550220 COA7Q96BR5 231 aa13.21□□□□□ -0.29
VTI1BP3-201ENST00000550220 EHD4Q9H223 541 aa13.21□□□□□ -0.29
VTI1BP3-201ENST00000550220 KIAA0100Q14667 2235 aaKnown RBP13.21□□□□□ -0.29
VTI1BP3-201ENST00000550220 USP17L10C9JJH3 530 aa13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 TNPO2O14787 897 aaKnown RBP13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 SLURP2P0DP57 97 aa13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 EN2P19622 333 aaPredicted RBP13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 HMGCS2P54868 508 aa13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 MIGA1Q8NAN2 632 aa13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 PXYLP1Q8TE99 480 aa13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 GCC1Q96CN9 775 aa13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
VTI1BP3-201ENST00000550220 MAGEB6P1A0A0J9YX57 407 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 CTGFP29279 349 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 DYNLL1P63167 89 aaKnown RBP13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 IRF5Q13568 498 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 SLC9C2Q5TAH2 1124 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 TATDN1Q6P1N9 297 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 SIRT2Q8IXJ6 389 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 GTF3C2Q8WUA4 911 aaPredicted RBP13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 ANTXR1Q9H6X2 564 aa13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 SAP30BPQ9UHR5 308 aaKnown RBP13.19□□□□□ -0.3
VTI1BP3-201ENST00000550220 APBB1O00213 710 aa13.18□□□□□ -0.3
VTI1BP3-201ENST00000550220 FLT3LGP49771 235 aa13.18□□□□□ -0.3
VTI1BP3-201ENST00000550220 IRX3P78415 501 aaPredicted RBP13.18□□□□□ -0.3
VTI1BP3-201ENST00000550220 PRKCZQ05513 592 aa13.18□□□□□ -0.3
VTI1BP3-201ENST00000550220 RRP1BQ14684 758 aaKnown RBP13.18□□□□□ -0.3
VTI1BP3-201ENST00000550220 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms