RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 NIM1KQ8IY84 436 aa14.71□□□□□ -0.05
CACNB3-212ENST00000549971 NSUN7Q8NE18 718 aaKnown RBP14.71□□□□□ -0.05
CACNB3-212ENST00000549971 HDAC9Q9UKV0 1011 aa14.71□□□□□ -0.05
CACNB3-212ENST00000549971 NAV1Q8NEY1 1877 aa14.71□□□□□ -0.05
CACNB3-212ENST00000549971 BAG4O95429 457 aaKnown RBP14.7□□□□□ -0.06
CACNB3-212ENST00000549971 CRKP46108 304 aa14.7□□□□□ -0.06
CACNB3-212ENST00000549971 ZSCAN10Q96SZ4 725 aaPredicted RBP14.7□□□□□ -0.06
CACNB3-212ENST00000549971 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
CACNB3-212ENST00000549971 DHX36Q9H2U1 1008 aaKnown RBP14.7□□□□□ -0.06
CACNB3-212ENST00000549971 TCP11L1Q9NUJ3 509 aa14.7□□□□□ -0.06
CACNB3-212ENST00000549971 SWAP70Q9UH65 585 aa14.7□□□□□ -0.06
CACNB3-212ENST00000549971 ZNRF3Q9ULT6 936 aa14.7□□□□□ -0.06
CACNB3-212ENST00000549971 NAP1L2Q9ULW6 460 aaPredicted RBP14.7□□□□□ -0.06
CACNB3-212ENST00000549971 DDX60LQ5H9U9 1706 aaKnown RBP14.69□□□□□ -0.06
CACNB3-212ENST00000549971 TNKSO95271 1327 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 PTPDC1A2A3K4 754 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 TSPY2A6NKD2 308 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 RANBP6O60518 1105 aaKnown RBP14.69□□□□□ -0.06
CACNB3-212ENST00000549971 DDAH1O94760 285 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 F13A1P00488 732 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 IARSP41252 1262 aaKnown RBP14.69□□□□□ -0.06
CACNB3-212ENST00000549971 DGKHQ86XP1 1220 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 MAPKAPK5Q8IW41 473 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 AGBL3Q8NEM8 1001 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 WASF1Q92558 559 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 ZSCAN16Q9H4T2 348 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-212ENST00000549971 MKNK2Q9HBH9 465 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 BRPF3Q9ULD4 1205 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 ZDHHC9Q9Y397 364 aa14.69□□□□□ -0.06
CACNB3-212ENST00000549971 COL2A1P02458 1487 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-212ENST00000549971 STK36Q9NRP7 1315 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 GOLGA8AA7E2F4 631 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 HLA-DOAP06340 250 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 VIL1P09327 827 aaKnown RBP14.68□□□□□ -0.06
CACNB3-212ENST00000549971 USP17L8P0C7I0 530 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 PTGER2P43116 358 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 SEC23AQ15436 765 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 IFIT1BQ5T764 474 aaKnown RBP14.68□□□□□ -0.06
CACNB3-212ENST00000549971 RSBN1LQ6PCB5 846 aaPredicted RBP14.68□□□□□ -0.06
CACNB3-212ENST00000549971 C16orf86Q6ZW13 317 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 CATIPQ7Z7H3 387 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 ZNF444Q8N0Y2 327 aaPredicted RBP14.68□□□□□ -0.06
CACNB3-212ENST00000549971 JDP2Q8WYK2 163 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 ANKS1AQ92625 1134 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 MAP3K14Q99558 947 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 IDI2Q9BXS1 227 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 EHD4Q9H223 541 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 SPON1Q9HCB6 807 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 USP40Q9NVE5 1235 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 RBM28Q9NW13 759 aaKnown RBP14.68□□□□□ -0.06
CACNB3-212ENST00000549971 HPS5Q9UPZ3 1129 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 MTMR6Q9Y217 621 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 PSME4Q14997 1843 aa14.68□□□□□ -0.06
CACNB3-212ENST00000549971 F8W031 263 aaPredicted RBP14.67□□□□□ -0.06
CACNB3-212ENST00000549971 H3BQV1 296 aa14.67□□□□□ -0.06
CACNB3-212ENST00000549971 CCT2P78371 535 aaKnown RBP14.67□□□□□ -0.06
CACNB3-212ENST00000549971 PKP1Q13835 747 aa14.67□□□□□ -0.06
CACNB3-212ENST00000549971 IFFO2Q5TF58 517 aa14.67□□□□□ -0.06
CACNB3-212ENST00000549971 APOBEC3HQ6NTF7 200 aaKnown RBP14.67□□□□□ -0.06
CACNB3-212ENST00000549971 OGFOD1Q8N543 542 aa14.67□□□□□ -0.06
CACNB3-212ENST00000549971 TMOD2Q9NZR1 351 aa14.67□□□□□ -0.06
CACNB3-212ENST00000549971 BRCA1P38398 1863 aaKnown RBP14.67□□□□□ -0.06
CACNB3-212ENST00000549971 FOCADQ5VW36 1801 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 PLIN4Q96Q06 1357 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 CYP2D7A0A087X1C5 515 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-212ENST00000549971 WDHD1O75717 1129 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-212ENST00000549971 TNIP1Q15025 636 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 RTN1Q16799 776 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 ATL3Q6DD88 541 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 CDC42EP5Q6NZY7 148 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 MICU3Q86XE3 530 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 KIAA0825Q8IV33 1275 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 ZNF654Q8IZM8 581 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 ENAHQ8N8S7 591 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-212ENST00000549971 OSBPL5Q9H0X9 879 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-212ENST00000549971 RBM27Q9P2N5 1060 aaKnown RBP14.66□□□□□ -0.06
CACNB3-212ENST00000549971 TACC3Q9Y6A5 838 aa14.66□□□□□ -0.06
CACNB3-212ENST00000549971 ZNF646O15015 1829 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-212ENST00000549971 YDJCA8MPS7 323 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 ENTPD3O75355 529 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 CTDNEP1O95476 244 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 CYP2D6P10635 497 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 IFNAR1P17181 557 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 RPS12P25398 132 aaKnown RBP14.65□□□□□ -0.06
CACNB3-212ENST00000549971 SCNN1DP51172 638 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 MTMR14Q8NCE2 650 aa14.65□□□□□ -0.06
CACNB3-212ENST00000549971 GPHNQ9NQX3 736 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-212ENST00000549971 ZNF277Q9NRM2 450 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-212ENST00000549971 ORC3Q9UBD5 711 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-212ENST00000549971 BAZ2AQ9UIF9 1905 aaKnown RBP14.64□□□□□ -0.07
CACNB3-212ENST00000549971 JAK2O60674 1132 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 KIF5BP33176 963 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 CDK8P49336 464 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
CACNB3-212ENST00000549971 TFAP4Q01664 338 aa14.64□□□□□ -0.07
CACNB3-212ENST00000549971 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms