RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 C20orf204Q6ZNR8 217 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 FAM35AQ86V20 835 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 MAP4K3Q8IVH8 894 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 CMTR1Q8N1G2 835 aaKnown RBP4.55□□□□□ -1.68
RAB5B-207ENST00000549915 MUC3BQ9H195 1237 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 SLC12A5Q9H2X9 1139 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 IGFLR1Q9H665 355 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 DCTPP1Q9H773 170 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 IFT57Q9NWB7 429 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 TMEM63CQ9P1W3 806 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 USP25Q9UHP3 1055 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 STARD13Q9Y3M8 1113 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.55□□□□□ -1.68
RAB5B-207ENST00000549915 KIF20BQ96Q89 1820 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 RGS12O14924 1447 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 ATP10DQ9P241 1426 aa4.55□□□□□ -1.68
RAB5B-207ENST00000549915 A0A1W2PP64 1363 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 RTL1A6NKG5 1358 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 CAMSAP1Q5T5Y3 1602 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 WDR33Q9C0J8 1336 aaKnown RBP4.54□□□□□ -1.68
RAB5B-207ENST00000549915 C9orf172C9J069 976 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 UBAP1LF5GYI3 381 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 TNFRSF10BO14763 440 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 OPLAHO14841 1288 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 ERC2O15083 957 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 DIAPH1O60610 1272 aaKnown RBP4.54□□□□□ -1.68
RAB5B-207ENST00000549915 FAM13AO94988 1023 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 PDIA4P13667 645 aaKnown RBP4.54□□□□□ -1.68
RAB5B-207ENST00000549915 NID1P14543 1247 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 GSPT1P15170 499 aaKnown RBP4.54□□□□□ -1.68
RAB5B-207ENST00000549915 COL8A1P27658 744 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 NOLC1Q14978 699 aaKnown RBP eCLIP4.54□□□□□ -1.68
RAB5B-207ENST00000549915 DNTTIP2Q5QJE6 756 aaKnown RBP4.54□□□□□ -1.68
RAB5B-207ENST00000549915 TRAPPC3LQ5T215 181 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 CCDC183Q5T5S1 534 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 ETFBKMTQ8IXQ9 262 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 RPAP2Q8IXW5 612 aaPredicted RBP4.54□□□□□ -1.68
RAB5B-207ENST00000549915 ANKRD44Q8N8A2 993 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 ANKRD7Q92527 254 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 PMEPA1Q969W9 287 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 TRIM11Q96F44 468 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 SPACA7Q96KW9 195 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 SPOCK3Q9BQ16 436 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 TERF2IPQ9NYB0 399 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 ATP7BP35670 1465 aa4.54□□□□□ -1.68
RAB5B-207ENST00000549915 KNDC1Q76NI1 1749 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 KRBA1A5PL33 1030 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 TMEM88BA6NKF7 163 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 U2SURPO15042 1029 aaKnown RBP4.53□□□□□ -1.68
RAB5B-207ENST00000549915 CTIFO43310 598 aaKnown RBP4.53□□□□□ -1.68
RAB5B-207ENST00000549915 EIF4EBP3O60516 100 aaPredicted RBP4.53□□□□□ -1.68
RAB5B-207ENST00000549915 HMMRO75330 724 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 SASH3O75995 380 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 EIF2AK2P19525 551 aaKnown RBP4.53□□□□□ -1.68
RAB5B-207ENST00000549915 HYAL2Q12891 473 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 NFE2L2Q16236 605 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 NOM1Q5C9Z4 860 aaKnown RBP4.53□□□□□ -1.68
RAB5B-207ENST00000549915 TTC39BQ5VTQ0 682 aaPredicted RBP4.53□□□□□ -1.68
RAB5B-207ENST00000549915 KRT25Q7Z3Z0 450 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 WFDC8Q8IUA0 241 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 SIRT2Q8IXJ6 389 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 SUV39H2Q9H5I1 410 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 EGFL7Q9UHF1 273 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 ZDHHC9Q9Y397 364 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 ATP6V1DQ9Y5K8 247 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 KCNMB2Q9Y691 235 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 NPATQ14207 1427 aa4.53□□□□□ -1.68
RAB5B-207ENST00000549915 ARHGEF10O15013 1369 aa4.53□□□□□ -1.69
RAB5B-207ENST00000549915 CHD1O14646 1710 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 PTPRCP08575 1304 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 AOX1Q06278 1338 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 CD163L1Q9NR16 1453 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 CCDC66A2RUB6 948 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 VAMP4O75379 141 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 ZNF853P0CG23 659 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 CPB1P15086 417 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 SDSP20132 328 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 TARSP26639 723 aaKnown RBP4.52□□□□□ -1.69
RAB5B-207ENST00000549915 MZF1P28698 734 aaPredicted RBP4.52□□□□□ -1.69
RAB5B-207ENST00000549915 GATA4P43694 442 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 UBE2HP62256 183 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 FGD1P98174 961 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 NAA30Q147X3 362 aaPredicted RBP4.52□□□□□ -1.69
RAB5B-207ENST00000549915 MSL1Q68DK7 614 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 HDGFL2Q7Z4V5 671 aaPredicted RBP4.52□□□□□ -1.69
RAB5B-207ENST00000549915 OR13H1Q8NG92 308 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 KIAA1524Q8TCG1 905 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 TMX3Q96JJ7 454 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 SAP130Q9H0E3 1048 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 ABI2Q9NYB9 513 aaPredicted RBP4.52□□□□□ -1.69
RAB5B-207ENST00000549915 OGFRQ9NZT2 677 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 ZFATQ9P243 1243 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 CGNQ9P2M7 1197 aaKnown RBP4.52□□□□□ -1.69
RAB5B-207ENST00000549915 TRAK1Q9UPV9 953 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 RIMS2Q9UQ26 1411 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 KIDINS220Q9ULH0 1771 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 NRKQ7Z2Y5 1582 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 AATKQ6ZMQ8 1374 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 KIAA0232Q92628 1395 aa4.52□□□□□ -1.69
RAB5B-207ENST00000549915 ARHGEF40Q8TER5 1519 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms