RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 PROCA1Q8NCQ7 364 aaPredicted RBP13.59□□□□□ -0.23
TROAP-210ENST00000549534 FAM151AQ8WW52 585 aa13.59□□□□□ -0.23
TROAP-210ENST00000549534 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
TROAP-210ENST00000549534 MRIQ9BWK5 157 aa13.59□□□□□ -0.23
TROAP-210ENST00000549534 IRF2BPLQ9H1B7 796 aa13.59□□□□□ -0.23
TROAP-210ENST00000549534 NKX2-4Q9H2Z4 354 aa13.59□□□□□ -0.23
TROAP-210ENST00000549534 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
TROAP-210ENST00000549534 PLXNB2O15031 1838 aa13.58□□□□□ -0.24
TROAP-210ENST00000549534 MAPK4P31152 587 aa13.58□□□□□ -0.24
TROAP-210ENST00000549534 SSTR3P32745 418 aaPredicted RBP13.58□□□□□ -0.24
TROAP-210ENST00000549534 CHRNDQ07001 517 aa13.58□□□□□ -0.24
TROAP-210ENST00000549534 PPIGQ13427 754 aaKnown RBP eCLIP13.58□□□□□ -0.241e-7■■□□□ 12
TROAP-210ENST00000549534 PKN1Q16512 942 aa13.58□□□□□ -0.24
TROAP-210ENST00000549534 CCL14Q16627 93 aa13.58□□□□□ -0.24
TROAP-210ENST00000549534 GJC2Q5T442 439 aaPredicted RBP13.58□□□□□ -0.24
TROAP-210ENST00000549534 HFE2Q6ZVN8 426 aa13.58□□□□□ -0.24
TROAP-210ENST00000549534 CWC25Q9NXE8 425 aaPredicted RBP13.58□□□□□ -0.24
TROAP-210ENST00000549534 DBF4Q9UBU7 674 aaPredicted RBP13.58□□□□□ -0.24
TROAP-210ENST00000549534 KMT2BQ9UMN6 2715 aaPredicted RBP13.58□□□□□ -0.24
TROAP-210ENST00000549534 DCHS1Q96JQ0 3298 aa13.58□□□□□ -0.24
TROAP-210ENST00000549534 NEFMP07197 916 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 SLC5A1P13866 664 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 ZDHHC15Q96MV8 337 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 TMEM39AQ9NV64 488 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 HYPKQ9NX55 129 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 ZNF521Q96K83 1311 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 FRMPD3Q5JV73 1810 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 PLXNA1Q9UIW2 1896 aa13.57□□□□□ -0.24
TROAP-210ENST00000549534 CHD7Q9P2D1 2997 aa13.56□□□□□ -0.24
TROAP-210ENST00000549534 CNGA1P29973 690 aa13.56□□□□□ -0.24
TROAP-210ENST00000549534 MORN1Q5T089 497 aa13.56□□□□□ -0.24
TROAP-210ENST00000549534 TREML2Q5T2D2 321 aa13.56□□□□□ -0.24
TROAP-210ENST00000549534 PPP2R2DQ66LE6 453 aa13.56□□□□□ -0.24
TROAP-210ENST00000549534 PSRC1Q6PGN9 363 aaPredicted RBP13.56□□□□□ -0.24
TROAP-210ENST00000549534 SLC44A5Q8NCS7 719 aa13.56□□□□□ -0.24
TROAP-210ENST00000549534 MTIF3Q9H2K0 278 aaKnown RBP13.56□□□□□ -0.24
TROAP-210ENST00000549534 PTPRZ1P23471 2315 aaPredicted RBP13.55□□□□□ -0.24
TROAP-210ENST00000549534 KCTD2Q14681 263 aa13.55□□□□□ -0.24
TROAP-210ENST00000549534 ZFHX2Q9C0A1 2572 aaPredicted RBP13.55□□□□□ -0.24
TROAP-210ENST00000549534 AK9Q5TCS8 1911 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 TRIM75PA6NK02 468 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 TIMP1P01033 207 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 ADCYAP1R1P41586 468 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 GOLGA2Q08379 1002 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
TROAP-210ENST00000549534 MFSD5Q6N075 450 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 C16orf59Q7L2K0 433 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 GPRC5AQ8NFJ5 357 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 TOX2Q96NM4 488 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 YBX2Q9Y2T7 364 aaKnown RBP13.54□□□□□ -0.24
TROAP-210ENST00000549534 GAKO14976 1311 aa13.54□□□□□ -0.24
TROAP-210ENST00000549534 TCF15Q12870 199 aa13.53□□□□□ -0.24
TROAP-210ENST00000549534 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
TROAP-210ENST00000549534 APOBEC3HQ6NTF7 200 aaKnown RBP13.53□□□□□ -0.24
TROAP-210ENST00000549534 CCAR1Q8IX12 1150 aaKnown RBP13.53□□□□□ -0.24
TROAP-210ENST00000549534 JARID2Q92833 1246 aaPredicted RBP13.53□□□□□ -0.24
TROAP-210ENST00000549534 MYD88Q99836 296 aa13.53□□□□□ -0.24
TROAP-210ENST00000549534 ASCC2Q9H1I8 757 aaPredicted RBP13.53□□□□□ -0.24
TROAP-210ENST00000549534 ZNF316A6NFI3 1004 aaPredicted RBP13.52□□□□□ -0.25
TROAP-210ENST00000549534 PROB1E7EW31 1015 aa13.52□□□□□ -0.25
TROAP-210ENST00000549534 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
TROAP-210ENST00000549534 BMP8AQ7Z5Y6 402 aa13.52□□□□□ -0.25
TROAP-210ENST00000549534 GPR142Q7Z601 462 aa13.52□□□□□ -0.25
TROAP-210ENST00000549534 PLEKHH3Q7Z736 793 aa13.52□□□□□ -0.25
TROAP-210ENST00000549534 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
TROAP-210ENST00000549534 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.25
TROAP-210ENST00000549534 ATRNL1Q5VV63 1379 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 SNAP23O00161 211 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 CTNND1O60716 968 aaKnown RBP13.51□□□□□ -0.25
TROAP-210ENST00000549534 HOXB7P09629 217 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 ITGA6P23229 1130 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 HDGFL1Q5TGJ6 251 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
TROAP-210ENST00000549534 ANKRD33Q7Z3H0 272 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 TBC1D22AQ8WUA7 517 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 PHF24Q9UPV7 400 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 PCDHA11Q9Y5I1 949 aa13.51□□□□□ -0.25
TROAP-210ENST00000549534 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
TROAP-210ENST00000549534 ATRXP46100 2492 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 MAST3O60307 1309 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 DCDC2CA8MYV0 355 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 PQBP1O60828 265 aaKnown RBP13.5□□□□□ -0.25
TROAP-210ENST00000549534 TAF5LO75529 589 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
TROAP-210ENST00000549534 FAAP100Q0VG06 881 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 COL9A2Q14055 689 aaPredicted RBP13.5□□□□□ -0.25
TROAP-210ENST00000549534 LEXMQ3ZCV2 418 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 ZNF365Q70YC5 407 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 TMEM199Q8N511 208 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 FERMT2Q96AC1 680 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
TROAP-210ENST00000549534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.5□□□□□ -0.25
TROAP-210ENST00000549534 SPEF2Q9C093 1822 aa13.49□□□□□ -0.25
TROAP-210ENST00000549534 MED19A0JLT2 244 aaPredicted RBP13.49□□□□□ -0.25
TROAP-210ENST00000549534 PER1O15534 1290 aaPredicted RBP13.49□□□□□ -0.25
TROAP-210ENST00000549534 HOXC6P09630 235 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms