RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 B4E1Z4 1266 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 ERCC6LQ2NKX8 1250 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 FAM84BQ96KN1 310 aaPredicted RBP12.8□□□□□ -0.36
LINC00661-204ENST00000549354 TULP1O00294 542 aaPredicted RBP12.8□□□□□ -0.36
LINC00661-204ENST00000549354 PLSCR1O15162 318 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 PRC1O43663 620 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 GNL3LQ9NVN8 582 aaKnown RBP12.8□□□□□ -0.36
LINC00661-204ENST00000549354 PCDHA7Q9UN72 937 aa12.8□□□□□ -0.36
LINC00661-204ENST00000549354 SMIM22K7EJ46 135 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 PFKFB2O60825 505 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 TRIM37O94972 964 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
LINC00661-204ENST00000549354 DHX40Q8IX18 779 aaKnown RBP12.79□□□□□ -0.36
LINC00661-204ENST00000549354 CEP57L1Q8IYX8 460 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 PCNTO95613 3336 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 FBXO38Q6PIJ6 1188 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 TMED8Q6PL24 325 aaPredicted RBP12.79□□□□□ -0.36
LINC00661-204ENST00000549354 MB21D2Q8IYB1 491 aaPredicted RBP12.79□□□□□ -0.36
LINC00661-204ENST00000549354 GRAMD1CQ8IYS0 662 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
LINC00661-204ENST00000549354 XPO4Q9C0E2 1151 aaKnown RBP12.79□□□□□ -0.36
LINC00661-204ENST00000549354 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
LINC00661-204ENST00000549354 PATL2C9JE40 543 aaKnown RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 SERPINC1P01008 464 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 TRMT44Q8IYL2 757 aaKnown RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 ZNF274Q96GC6 653 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 ABCF2Q9UG63 623 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 CASP1P29466 404 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 CTDSPL2Q05D32 466 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 CFAP100Q494V2 611 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 CAVIN4Q5BKX8 364 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 PRR5LQ6MZQ0 368 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 OGFRQ9NZT2 677 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 KCNJ14Q9UNX9 436 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 WTIPA6NIX2 430 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 GRAPQ13588 217 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 C15orf52Q6ZUT6 534 aaKnown RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 MAGEB6Q8N7X4 407 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 GTPBP4Q9BZE4 634 aaKnown RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-204ENST00000549354 ANO10Q9NW15 660 aa12.78□□□□□ -0.36
LINC00661-204ENST00000549354 MINDY4BA8MYZ0 360 aa12.77□□□□□ -0.36
LINC00661-204ENST00000549354 ZNF213O14771 459 aa12.77□□□□□ -0.36
LINC00661-204ENST00000549354 FOXN1O15353 648 aa12.77□□□□□ -0.36
LINC00661-204ENST00000549354 GNAT2P19087 354 aa12.77□□□□□ -0.36
LINC00661-204ENST00000549354 GYG1P46976 350 aa12.77□□□□□ -0.36
LINC00661-204ENST00000549354 CCZ1BP86790 482 aa12.77□□□□□ -0.36
LINC00661-204ENST00000549354 CCZ1P86791 482 aaPredicted RBP12.77□□□□□ -0.36
LINC00661-204ENST00000549354 NRXN2Q9P2S2 1712 aa12.77□□□□□ -0.36
LINC00661-204ENST00000549354 PRDM1O75626 825 aa12.77□□□□□ -0.37
LINC00661-204ENST00000549354 STX17P56962 302 aa12.77□□□□□ -0.37
LINC00661-204ENST00000549354 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
LINC00661-204ENST00000549354 PNOCQ13519 176 aa12.77□□□□□ -0.37
LINC00661-204ENST00000549354 KIF18AQ8NI77 898 aa12.77□□□□□ -0.37
LINC00661-204ENST00000549354 HINFPQ9BQA5 517 aa12.77□□□□□ -0.37
LINC00661-204ENST00000549354 POLR3GO15318 223 aaPredicted RBP12.77□□□□□ -0.37
LINC00661-204ENST00000549354 TRDNQ13061 729 aa12.77□□□□□ -0.37
LINC00661-204ENST00000549354 UTP14CQ5TAP6 766 aaKnown RBP12.77□□□□□ -0.37
LINC00661-204ENST00000549354 RBM43Q6ZSC3 357 aaKnown RBP12.77□□□□□ -0.37
LINC00661-204ENST00000549354 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
LINC00661-204ENST00000549354 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
LINC00661-204ENST00000549354 KIF28PB7ZC32 967 aa12.76□□□□□ -0.37
LINC00661-204ENST00000549354 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
LINC00661-204ENST00000549354 NCOA7Q8NI08 942 aa12.76□□□□□ -0.37
LINC00661-204ENST00000549354 AIDAQ96BJ3 306 aa12.76□□□□□ -0.37
LINC00661-204ENST00000549354 RCOR1Q9UKL0 485 aa12.76□□□□□ -0.37
LINC00661-204ENST00000549354 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
LINC00661-204ENST00000549354 HOXA10P31260 410 aaPredicted RBP12.76□□□□□ -0.37
LINC00661-204ENST00000549354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.76□□□□□ -0.37
LINC00661-204ENST00000549354 ZNF396Q96N95 335 aaPredicted RBP12.76□□□□□ -0.37
LINC00661-204ENST00000549354 SLC26A6Q9BXS9 759 aa12.76□□□□□ -0.37
LINC00661-204ENST00000549354 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
LINC00661-204ENST00000549354 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
LINC00661-204ENST00000549354 SERPINB2P05120 415 aa12.75□□□□□ -0.37
LINC00661-204ENST00000549354 SLC3A2P08195 630 aaKnown RBP12.75□□□□□ -0.37
LINC00661-204ENST00000549354 ANTXR2P58335 489 aa12.75□□□□□ -0.37
LINC00661-204ENST00000549354 IFNL3Q8IZI9 196 aa12.75□□□□□ -0.37
LINC00661-204ENST00000549354 MRPS27Q92552 414 aaKnown RBP12.75□□□□□ -0.37
LINC00661-204ENST00000549354 EPB41L4AQ9HCS5 686 aaPredicted RBP12.75□□□□□ -0.37
LINC00661-204ENST00000549354 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
LINC00661-204ENST00000549354 DNAI1Q9UI46 699 aa12.75□□□□□ -0.37
LINC00661-204ENST00000549354 MBD4O95243 580 aa12.75□□□□□ -0.37
LINC00661-204ENST00000549354 DDX41Q9UJV9 622 aaKnown RBP12.75□□□□□ -0.37
LINC00661-204ENST00000549354 SALL1Q9NSC2 1324 aa12.75□□□□□ -0.37
LINC00661-204ENST00000549354 MAST2Q6P0Q8 1798 aa12.75□□□□□ -0.37
LINC00661-204ENST00000549354 POLRMTO00411 1230 aaKnown RBP12.75□□□□□ -0.37
LINC00661-204ENST00000549354 PRKAB2O43741 272 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms