RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 CPA1P15085 419 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 GNAT2P19087 354 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 BTDP43251 543 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 SCNN1DP51172 638 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 RHBDL3P58872 404 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 PPP4CP60510 307 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 HAND2P61296 217 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 RNF20Q5VTR2 975 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 ARHGAP27Q6ZUM4 889 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 SH3RF3Q8TEJ3 882 aaPredicted RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 SNX21Q969T3 373 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 DDRGK1Q96HY6 314 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 JAKMIP1Q96N16 626 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 TTC14Q96N46 770 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 GMLQ99445 158 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 UPF3BQ9BZI7 483 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 TM6SF1Q9BZW5 370 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 HCSTQ9UBK5 93 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 ZNRF3Q9ULT6 936 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 PCDHAC2Q9Y5I4 1007 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 SIPA1L1O43166 1804 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 SMIM22K7EJ46 135 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 APPP05067 770 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 ZKSCAN1P17029 563 aaPredicted RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 HSPA6P17066 643 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 CASTP20810 708 aaKnown RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 RSBN1LQ6PCB5 846 aaPredicted RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 ADGRD1Q6QNK2 874 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 KIAA0825Q8IV33 1275 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 CRNKL1Q9BZJ0 848 aaKnown RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 NAPBQ9H115 298 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 MKRN1Q9UHC7 482 aaKnown RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 CTNNA3Q9UI47 895 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 E7EWF7 191 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 CRKP46108 304 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 SLC4A3P48751 1232 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 TDO2P48775 406 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 NEK4P51957 841 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 CXCL9Q07325 125 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 IMMTQ16891 758 aaKnown RBP9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 HHIPL2Q6UWX4 724 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 DCP1AQ9NPI6 582 aaPredicted RBP9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 MYH8P13535 1937 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 ZNF541Q9H0D2 1346 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CYP2D7A0A087X1C5 515 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 FZD9O00144 591 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 ZNF213O14771 459 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 BAG3O95817 575 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CYP2D6P10635 497 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CTDSPL2Q05D32 466 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 KRT32Q14532 448 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CIAPIN1Q6FI81 312 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 APOBEC3HQ6NTF7 200 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CTR9Q6PD62 1173 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 RUFY3Q7L099 469 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 TEX11Q8IYF3 940 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 TEKT1Q969V4 418 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 TCEANC2Q96MN5 208 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 ZDHHC15Q96MV8 337 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 MRIQ9BWK5 157 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 NACAP1Q9BZK3 213 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 ATP8A2Q9NTI2 1148 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 PLA2G2EQ9NZK7 142 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 FLT1P17948 1338 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 NEDD4P46934 1319 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 MYO3BQ8WXR4 1341 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 SHTN1A0MZ66 631 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 EVI5O60447 810 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 PSMA5P28066 241 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 AK2P54819 239 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 PPARAQ07869 468 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 CFAP100Q494V2 611 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 SBK1Q52WX2 424 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 CDC42EP5Q6NZY7 148 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 BLOC1S2Q6QNY1 142 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 CERS3Q8IU89 383 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 MAPKAPK5Q8IW41 473 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 HSCBQ8IWL3 235 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 MB21D2Q8IYB1 491 aaPredicted RBP9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 TGFBRAP1Q8WUH2 860 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 JDP2Q8WYK2 163 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 NEK1Q96PY6 1258 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 NOL10Q9BSC4 688 aaKnown RBP9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 DDX4Q9NQI0 724 aaKnown RBP9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 INCENPQ9NQS7 918 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 ANAPC4Q9UJX5 808 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 SERPINA10Q9UK55 444 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 GOLGB1Q14789 3259 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms