RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TAOK2Q9UL54 1235 aa25.15■■□□□ 1.62
CACNB3-210ENST00000548874 ROBO3Q96MS0 1386 aa25.15■■□□□ 1.62
CACNB3-210ENST00000548874 CELF2O95319 508 aaKnown RBP25.14■■□□□ 1.62
CACNB3-210ENST00000548874 SLURP2P0DP57 97 aa25.14■■□□□ 1.62
CACNB3-210ENST00000548874 DCAF15Q66K64 600 aa25.14■■□□□ 1.62
CACNB3-210ENST00000548874 DNAJC18Q9H819 358 aa25.14■■□□□ 1.62
CACNB3-210ENST00000548874 SERPINB13Q9UIV8 391 aa25.14■■□□□ 1.62
CACNB3-210ENST00000548874 PPARAQ07869 468 aa25.13■■□□□ 1.61
CACNB3-210ENST00000548874 MIGA2Q7L4E1 593 aa25.13■■□□□ 1.61
CACNB3-210ENST00000548874 ZNF408Q9H9D4 720 aa25.13■■□□□ 1.61
CACNB3-210ENST00000548874 CTNNA3Q9UI47 895 aa25.13■■□□□ 1.61
CACNB3-210ENST00000548874 ANAPC4Q9UJX5 808 aa25.13■■□□□ 1.61
CACNB3-210ENST00000548874 U3KPZ7 1027 aaPredicted RBP25.13■■□□□ 1.61
CACNB3-210ENST00000548874 PAPPA2Q9BXP8 1791 aa25.13■■□□□ 1.61
CACNB3-210ENST00000548874 MINDY4BA8MYZ0 360 aa25.12■■□□□ 1.61
CACNB3-210ENST00000548874 USP2O75604 605 aaPredicted RBP25.12■■□□□ 1.61
CACNB3-210ENST00000548874 MAP3K11Q16584 847 aa25.12■■□□□ 1.61
CACNB3-210ENST00000548874 ZNF341Q9BYN7 854 aa25.12■■□□□ 1.61
CACNB3-210ENST00000548874 GBA2Q9HCG7 927 aaPredicted RBP25.12■■□□□ 1.61
CACNB3-210ENST00000548874 FAM196BA6NMK8 535 aa25.11■■□□□ 1.61
CACNB3-210ENST00000548874 PPP1R12BO60237 982 aaPredicted RBP25.11■■□□□ 1.61
CACNB3-210ENST00000548874 REC8O95072 547 aa25.11■■□□□ 1.61
CACNB3-210ENST00000548874 FKBP1BP68106 108 aa25.11■■□□□ 1.61
CACNB3-210ENST00000548874 C16orf86Q6ZW13 317 aa25.11■■□□□ 1.61
CACNB3-210ENST00000548874 CRACR2BQ8N4Y2 399 aaPredicted RBP25.11■■□□□ 1.61
CACNB3-210ENST00000548874 DYNLL2Q96FJ2 89 aa25.11■■□□□ 1.61
CACNB3-210ENST00000548874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.11■■□□□ 1.61
CACNB3-210ENST00000548874 ZNF112Q9UJU3 913 aa25.11■■□□□ 1.61
CACNB3-210ENST00000548874 FZD1Q9UP38 647 aa25.11■■□□□ 1.61
CACNB3-210ENST00000548874 RBM8AQ9Y5S9 174 aaKnown RBP25.11■■□□□ 1.61
CACNB3-210ENST00000548874 LAMA4Q16363 1823 aa25.11■■□□□ 1.61
CACNB3-210ENST00000548874 KLRG1Q96E93 195 aa25.1■■□□□ 1.61
CACNB3-210ENST00000548874 PHF20L1A8MW92 1017 aa25.09■■□□□ 1.61
CACNB3-210ENST00000548874 EPB41L2O43491 1005 aaKnown RBP25.09■■□□□ 1.61
CACNB3-210ENST00000548874 PRKG1Q13976 671 aa25.09■■□□□ 1.61
CACNB3-210ENST00000548874 TATDN1Q6P1N9 297 aa25.09■■□□□ 1.61
CACNB3-210ENST00000548874 SLC44A5Q8NCS7 719 aa25.09■■□□□ 1.61
CACNB3-210ENST00000548874 NBPF3Q9H094 633 aa25.09■■□□□ 1.61
CACNB3-210ENST00000548874 SWAP70Q9UH65 585 aa25.09■■□□□ 1.61
CACNB3-210ENST00000548874 SHMT1P34896 483 aa25.08■■□□□ 1.61
CACNB3-210ENST00000548874 HAND2P61296 217 aa25.08■■□□□ 1.61
CACNB3-210ENST00000548874 NECTIN1Q15223 517 aa25.08■■□□□ 1.61
CACNB3-210ENST00000548874 IMMTQ16891 758 aaKnown RBP25.08■■□□□ 1.61
CACNB3-210ENST00000548874 MOB2Q70IA6 237 aa25.08■■□□□ 1.61
CACNB3-210ENST00000548874 ARMC9Q7Z3E5 817 aa25.08■■□□□ 1.61
CACNB3-210ENST00000548874 C2orf69Q8N8R5 385 aa25.08■■□□□ 1.61
CACNB3-210ENST00000548874 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.08■■□□□ 1.61
CACNB3-210ENST00000548874 TRIM34Q9BYJ4 488 aa25.08■■□□□ 1.61
CACNB3-210ENST00000548874 ANGEL1Q9UNK9 670 aaKnown RBP25.08■■□□□ 1.61
CACNB3-210ENST00000548874 ZNF213O14771 459 aa25.07■■□□□ 1.6
CACNB3-210ENST00000548874 IREB2P48200 963 aaKnown RBP25.07■■□□□ 1.6
CACNB3-210ENST00000548874 CDK8P49336 464 aa25.07■■□□□ 1.6
CACNB3-210ENST00000548874 CTDSPL2Q05D32 466 aa25.07■■□□□ 1.6
CACNB3-210ENST00000548874 LDLRAD1Q5T700 205 aa25.07■■□□□ 1.6
CACNB3-210ENST00000548874 TACC3Q9Y6A5 838 aa25.07■■□□□ 1.6
CACNB3-210ENST00000548874 OTOFQ9HC10 1997 aa25.06■■□□□ 1.6
CACNB3-210ENST00000548874 TMEM88BA6NKF7 163 aa25.06■■□□□ 1.6
CACNB3-210ENST00000548874 EIF5BO60841 1220 aaKnown RBP25.06■■□□□ 1.6
CACNB3-210ENST00000548874 SLC3A2P08195 630 aaKnown RBP25.06■■□□□ 1.6
CACNB3-210ENST00000548874 CYP21A2P08686 494 aa25.06■■□□□ 1.6
CACNB3-210ENST00000548874 FGRP09769 529 aa25.06■■□□□ 1.6
CACNB3-210ENST00000548874 TTLL12Q14166 644 aaPredicted RBP25.06■■□□□ 1.6
CACNB3-210ENST00000548874 RRP1BQ14684 758 aaKnown RBP25.06■■□□□ 1.6
CACNB3-210ENST00000548874 TBC1D10CQ8IV04 446 aa25.06■■□□□ 1.6
CACNB3-210ENST00000548874 WRNIP1Q96S55 665 aa25.06■■□□□ 1.6
CACNB3-210ENST00000548874 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.06■■□□□ 1.6
CACNB3-210ENST00000548874 UNCXA6NJT0 531 aa25.05■■□□□ 1.6
CACNB3-210ENST00000548874 SEC24BO95487 1268 aa25.05■■□□□ 1.6
CACNB3-210ENST00000548874 APLP1P51693 650 aa25.05■■□□□ 1.6
CACNB3-210ENST00000548874 USP26Q9BXU7 913 aa25.05■■□□□ 1.6
CACNB3-210ENST00000548874 UBE2Q2LH0YL09 131 aa25.04■■□□□ 1.6
CACNB3-210ENST00000548874 INPP5BP32019 993 aa25.04■■□□□ 1.6
CACNB3-210ENST00000548874 MAP3K9P80192 1104 aa25.04■■□□□ 1.6
CACNB3-210ENST00000548874 PDE4BQ07343 736 aa25.04■■□□□ 1.6
CACNB3-210ENST00000548874 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.04■■□□□ 1.6
CACNB3-210ENST00000548874 STAG1Q8WVM7 1258 aa25.04■■□□□ 1.6
CACNB3-210ENST00000548874 SLC27A2O14975 620 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 CTNND1O60716 968 aaKnown RBP25.03■■□□□ 1.6
CACNB3-210ENST00000548874 PCP11498 1178 aaKnown RBP25.03■■□□□ 1.6
CACNB3-210ENST00000548874 CAP2P40123 477 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 NOL9Q5SY16 702 aaKnown RBP25.03■■□□□ 1.6
CACNB3-210ENST00000548874 AKNAD1Q5T1N1 836 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 CREB3L3Q68CJ9 461 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 SAPCD2Q86UD0 394 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 ANKRD13AQ8IZ07 590 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 STK11IPQ8N1F8 1099 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 ZNF287Q9HBT7 754 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 TLL2Q9Y6L7 1015 aa25.03■■□□□ 1.6
CACNB3-210ENST00000548874 ORC4O43929 436 aa25.02■■□□□ 1.6
CACNB3-210ENST00000548874 RASA1P20936 1047 aa25.02■■□□□ 1.6
CACNB3-210ENST00000548874 C1QTNF8P60827 252 aa25.02■■□□□ 1.6
CACNB3-210ENST00000548874 CERKLQ49MI3 558 aaPredicted RBP25.02■■□□□ 1.6
CACNB3-210ENST00000548874 RNF41Q9H4P4 317 aaPredicted RBP25.02■■□□□ 1.6
CACNB3-210ENST00000548874 INCENPQ9NQS7 918 aa25.02■■□□□ 1.6
CACNB3-210ENST00000548874 TAF6LQ9Y6J9 622 aa25.02■■□□□ 1.6
CACNB3-210ENST00000548874 PRDM1O75626 825 aa25.01■■□□□ 1.59
CACNB3-210ENST00000548874 HSPA4P34932 840 aa25.01■■□□□ 1.59
CACNB3-210ENST00000548874 JAG1P78504 1218 aa25.01■■□□□ 1.59
CACNB3-210ENST00000548874 VGLL4Q14135 290 aa25.01■■□□□ 1.59
CACNB3-210ENST00000548874 SCYL3Q8IZE3 742 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms