RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 LCORLQ8N3X6 602 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 CRACR2BQ8N4Y2 399 aaPredicted RBP19.1■□□□□ 0.65
DDX54-205ENST00000548786 RIOK1Q9BRS2 568 aaKnown RBP19.1■□□□□ 0.65
DDX54-205ENST00000548786 TRIM34Q9BYJ4 488 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■■■□□ 15.4
DDX54-205ENST00000548786 ARMT1Q9H993 441 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 ZHX2Q9Y6X8 837 aa19.1■□□□□ 0.65
DDX54-205ENST00000548786 GPR25O00155 361 aa19.09■□□□□ 0.65
DDX54-205ENST00000548786 CETPP11597 493 aa19.09■□□□□ 0.65
DDX54-205ENST00000548786 ADD2P35612 726 aa19.09■□□□□ 0.65
DDX54-205ENST00000548786 MAP3K10Q02779 954 aa19.09■□□□□ 0.65
DDX54-205ENST00000548786 HDAC1Q13547 482 aaPredicted RBP19.09■□□□□ 0.65
DDX54-205ENST00000548786 DGKZQ13574 1117 aa19.09■□□□□ 0.65
DDX54-205ENST00000548786 RRP1BQ14684 758 aaKnown RBP19.09■□□□□ 0.65
DDX54-205ENST00000548786 DHX36Q9H2U1 1008 aaKnown RBP19.09■□□□□ 0.65
DDX54-205ENST00000548786 PI4KBQ9UBF8 816 aa19.09■□□□□ 0.65
DDX54-205ENST00000548786 MYH1P12882 1939 aa19.08■□□□□ 0.65
DDX54-205ENST00000548786 TBC1D12O60347 775 aa19.08■□□□□ 0.64
DDX54-205ENST00000548786 CTNND1O60716 968 aaKnown RBP19.08■□□□□ 0.64
DDX54-205ENST00000548786 MBD4O95243 580 aa19.08■□□□□ 0.64
DDX54-205ENST00000548786 HLA-DOAP06340 250 aa19.08■□□□□ 0.64
DDX54-205ENST00000548786 PTPRAP18433 802 aa19.08■□□□□ 0.64
DDX54-205ENST00000548786 B4GALNT3Q6L9W6 998 aa19.08■□□□□ 0.64
DDX54-205ENST00000548786 SDR42E1Q8WUS8 393 aa19.08■□□□□ 0.64
DDX54-205ENST00000548786 CRNKL1Q9BZJ0 848 aaKnown RBP19.08■□□□□ 0.64
DDX54-205ENST00000548786 MCOLN1Q9GZU1 580 aa19.08■□□□□ 0.64
DDX54-205ENST00000548786 MYH7P12883 1935 aa19.08■□□□□ 0.64
DDX54-205ENST00000548786 NAV1Q8NEY1 1877 aa19.07■□□□□ 0.64
DDX54-205ENST00000548786 TRIM75PA6NK02 468 aa19.07■□□□□ 0.64
DDX54-205ENST00000548786 BTBD19C9JJ37 291 aa19.07■□□□□ 0.64
DDX54-205ENST00000548786 TAF1CQ15572 869 aaPredicted RBP19.07■□□□□ 0.64
DDX54-205ENST00000548786 SHROOM1Q2M3G4 852 aaPredicted RBP19.07■□□□□ 0.64
DDX54-205ENST00000548786 CERS3Q8IU89 383 aa19.07■□□□□ 0.64
DDX54-205ENST00000548786 DNAJC18Q9H819 358 aa19.07■□□□□ 0.64
DDX54-205ENST00000548786 HERC5Q9UII4 1024 aaKnown RBP19.07■□□□□ 0.64
DDX54-205ENST00000548786 ATAD5Q96QE3 1844 aa19.07■□□□□ 0.64
DDX54-205ENST00000548786 PRKAB2O43741 272 aa19.06■□□□□ 0.64
DDX54-205ENST00000548786 GDF11O95390 407 aa19.06■□□□□ 0.64
DDX54-205ENST00000548786 IGHDP01880 384 aa19.06■□□□□ 0.64
DDX54-205ENST00000548786 MX1P20591 662 aa19.06■□□□□ 0.64
DDX54-205ENST00000548786 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
DDX54-205ENST00000548786 GCC1Q96CN9 775 aa19.06■□□□□ 0.64
DDX54-205ENST00000548786 KCNH4Q9UQ05 1017 aa19.06■□□□□ 0.64
DDX54-205ENST00000548786 FKTNO75072 461 aa19.05■□□□□ 0.64
DDX54-205ENST00000548786 EVX2Q03828 476 aa19.05■□□□□ 0.64
DDX54-205ENST00000548786 GADL1Q6ZQY3 521 aa19.05■□□□□ 0.64
DDX54-205ENST00000548786 PI4K2BQ8TCG2 481 aa19.05■□□□□ 0.64
DDX54-205ENST00000548786 LNPKQ9C0E8 428 aa19.05■□□□□ 0.64
DDX54-205ENST00000548786 RWDD1Q9H446 243 aaPredicted RBP19.05■□□□□ 0.64
DDX54-205ENST00000548786 TTC41PQ6P2S7 1318 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 ERC2O15083 957 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 ECM2O94769 699 aaPredicted RBP19.04■□□□□ 0.64
DDX54-205ENST00000548786 POLR3DP05423 398 aaPredicted RBP19.04■□□□□ 0.64
DDX54-205ENST00000548786 CAP2P40123 477 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 JAG1P78504 1218 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 AAMPQ13685 434 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 DDX60LQ5H9U9 1706 aaKnown RBP19.04■□□□□ 0.64
DDX54-205ENST00000548786 ZSCAN25Q6NSZ9 544 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 KBTBD3Q8NAB2 608 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 ABHD8Q96I13 439 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 CFHR5Q9BXR6 569 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 PUS7LQ9H0K6 701 aaKnown RBP19.04■□□□□ 0.64
DDX54-205ENST00000548786 MCM9Q9NXL9 1143 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 AFG3L2Q9Y4W6 797 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 PHIPQ8WWQ0 1821 aa19.04■□□□□ 0.64
DDX54-205ENST00000548786 PDHXO00330 501 aa19.03■□□□□ 0.64
DDX54-205ENST00000548786 CYP2D6P10635 497 aa19.03■□□□□ 0.64
DDX54-205ENST00000548786 PLCD1P51178 756 aa19.03■□□□□ 0.64
DDX54-205ENST00000548786 MOGSQ13724 837 aa19.03■□□□□ 0.64
DDX54-205ENST00000548786 UBE3CQ15386 1083 aa19.03■□□□□ 0.64
DDX54-205ENST00000548786 CTU1Q7Z7A3 348 aaKnown RBP19.03■□□□□ 0.64
DDX54-205ENST00000548786 FOXP4Q8IVH2 680 aaPredicted RBP19.03■□□□□ 0.64
DDX54-205ENST00000548786 ZFYVE28Q9HCC9 887 aa19.03■□□□□ 0.64
DDX54-205ENST00000548786 CXCL11O14625 94 aa19.02■□□□□ 0.64
DDX54-205ENST00000548786 GLRX3O76003 335 aaKnown RBP19.02■□□□□ 0.64
DDX54-205ENST00000548786 CD99L2Q8TCZ2 262 aa19.02■□□□□ 0.64
DDX54-205ENST00000548786 DCP1AQ9NPI6 582 aaPredicted RBP19.02■□□□□ 0.64
DDX54-205ENST00000548786 SLC4A4Q9Y6R1 1079 aa19.02■□□□□ 0.64
DDX54-205ENST00000548786 SALL3Q9BXA9 1300 aa19.01■□□□□ 0.63
DDX54-205ENST00000548786 A0A0G2JLL6 359 aaPredicted RBP19.01■□□□□ 0.63
DDX54-205ENST00000548786 SPP2Q13103 211 aa19.01■□□□□ 0.63
DDX54-205ENST00000548786 PRRT2Q7Z6L0 340 aaPredicted RBP19.01■□□□□ 0.63
DDX54-205ENST00000548786 ANKRD23Q86SG2 305 aa19.01■□□□□ 0.63
DDX54-205ENST00000548786 TTC6Q86TZ1 520 aa19.01■□□□□ 0.63
DDX54-205ENST00000548786 METTL16Q86W50 562 aaKnown RBP19.01■□□□□ 0.63
DDX54-205ENST00000548786 FSD1Q9BTV5 496 aa19.01■□□□□ 0.63
DDX54-205ENST00000548786 SERPINB13Q9UIV8 391 aa19.01■□□□□ 0.63
DDX54-205ENST00000548786 BAZ2AQ9UIF9 1905 aaKnown RBP19■□□□□ 0.63
DDX54-205ENST00000548786 CYP2D7A0A087X1C5 515 aa19■□□□□ 0.63
DDX54-205ENST00000548786 USP17L5A8MUK1 530 aa19■□□□□ 0.63
DDX54-205ENST00000548786 RNF113AO15541 343 aaKnown RBP19■□□□□ 0.63
DDX54-205ENST00000548786 CYP2C8P10632 490 aa19■□□□□ 0.63
DDX54-205ENST00000548786 GPAT2Q6NUI2 795 aa19■□□□□ 0.63
DDX54-205ENST00000548786 SMC5Q8IY18 1101 aa19■□□□□ 0.63
DDX54-205ENST00000548786 OSBP2Q969R2 916 aa19■□□□□ 0.63
DDX54-205ENST00000548786 ZBTB21Q9ULJ3 1066 aa19■□□□□ 0.63
DDX54-205ENST00000548786 PTPRFP10586 1907 aa19■□□□□ 0.63
DDX54-205ENST00000548786 CCDC85CA6NKD9 419 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 SMIM22K7EJ46 135 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 M0R2C6 588 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms