RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PRR29P0C7W0 189 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 PLCD1P51178 756 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 NTRK3Q16288 839 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 NBPF3Q9H094 633 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 RRP15Q9Y3B9 282 aaKnown RBP26.35■■□□□ 1.81
NPAS3-206ENST00000548645 ABCC12Q96J65 1359 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 ZNF827Q17R98 1081 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 L1RE1Q9UN81 338 aa26.35■■□□□ 1.81
NPAS3-206ENST00000548645 PTPREP23469 700 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 RAD9BQ6WBX8 426 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 TEX13AQ9BXU3 409 aaPredicted RBP26.34■■□□□ 1.81
NPAS3-206ENST00000548645 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.34■■□□□ 1.81
NPAS3-206ENST00000548645 RSPH14Q9UHP6 348 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 KIF1AQ12756 1690 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 UBN2Q6ZU65 1347 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 GOLGA8AA7E2F4 631 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 SCARF1Q14162 830 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 KIF4BQ2VIQ3 1234 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 NFXL1Q6ZNB6 911 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 ADAMTSL3P82987 1691 aa26.34■■□□□ 1.81
NPAS3-206ENST00000548645 TRIM66O15016 1216 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 SAFBQ15424 915 aaKnown RBP eCLIP26.33■■□□□ 1.81
NPAS3-206ENST00000548645 ZNF569Q5MCW4 686 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 TBC1D10CQ8IV04 446 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 PNKPQ96T60 521 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 GBP3Q9H0R5 595 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 DENND2AQ9ULE3 1009 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 STK36Q9NRP7 1315 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 CTAGE9A4FU28 777 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 RANBP6O60518 1105 aaKnown RBP26.33■■□□□ 1.81
NPAS3-206ENST00000548645 IGSF22Q8N9C0 903 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 WASF1Q92558 559 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 MED15Q96RN5 788 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 EFCC1Q9HA90 598 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 FBXO2Q9UK22 296 aaPredicted RBP26.33■■□□□ 1.81
NPAS3-206ENST00000548645 FBXO3Q9UK99 471 aa26.33■■□□□ 1.81
NPAS3-206ENST00000548645 SSRP1Q08945 709 aaKnown RBP26.32■■□□□ 1.8
NPAS3-206ENST00000548645 CCDC57Q2TAC2 916 aa26.32■■□□□ 1.8
NPAS3-206ENST00000548645 ABCB6Q9NP58 842 aa26.32■■□□□ 1.8
NPAS3-206ENST00000548645 TUBBP07437 444 aa26.32■■□□□ 1.8
NPAS3-206ENST00000548645 RBL2Q08999 1139 aa26.32■■□□□ 1.8
NPAS3-206ENST00000548645 CT47A1Q5JQC4 288 aaPredicted RBP26.32■■□□□ 1.8
NPAS3-206ENST00000548645 SLC9C2Q5TAH2 1124 aa26.32■■□□□ 1.8
NPAS3-206ENST00000548645 TTLL7Q6ZT98 887 aa26.32■■□□□ 1.8
NPAS3-206ENST00000548645 RASGRP2Q7LDG7 609 aa26.32■■□□□ 1.8
NPAS3-206ENST00000548645 ZNF579Q8NAF0 562 aaKnown RBP26.32■■□□□ 1.8
NPAS3-206ENST00000548645 SLC26A6Q9BXS9 759 aa26.32■■□□□ 1.8
NPAS3-206ENST00000548645 NBPF26B4DH59 902 aa26.31■■□□□ 1.8
NPAS3-206ENST00000548645 RPS6KA5O75582 802 aa26.31■■□□□ 1.8
NPAS3-206ENST00000548645 CABP4P57796 275 aa26.31■■□□□ 1.8
NPAS3-206ENST00000548645 NBPF14Q5TI25 921 aa26.31■■□□□ 1.8
NPAS3-206ENST00000548645 NBPF10Q6P3W6 841 aaKnown RBP26.31■■□□□ 1.8
NPAS3-206ENST00000548645 NBPF15Q8N660 670 aa26.31■■□□□ 1.8
NPAS3-206ENST00000548645 TEX33O43247 280 aa26.31■■□□□ 1.8
NPAS3-206ENST00000548645 ORAI2Q96SN7 254 aa26.31■■□□□ 1.8
NPAS3-206ENST00000548645 B4E1Z4 1266 aa26.3■■□□□ 1.8
NPAS3-206ENST00000548645 PDE4CQ08493 712 aa26.3■■□□□ 1.8
NPAS3-206ENST00000548645 RILPL1Q5EBL4 403 aa26.3■■□□□ 1.8
NPAS3-206ENST00000548645 SGMS1Q86VZ5 419 aa26.3■■□□□ 1.8
NPAS3-206ENST00000548645 SENP2Q9HC62 589 aa26.3■■□□□ 1.8
NPAS3-206ENST00000548645 HSP90B2PQ58FF3 399 aa26.3■■□□□ 1.8
NPAS3-206ENST00000548645 IGDCC4Q8TDY8 1250 aa26.3■■□□□ 1.8
NPAS3-206ENST00000548645 FAM217BQ9NTX9 383 aaPredicted RBP26.3■■□□□ 1.8
NPAS3-206ENST00000548645 TTF2Q9UNY4 1162 aaKnown RBP26.3■■□□□ 1.8
NPAS3-206ENST00000548645 BTBD18B2RXH4 712 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 TOB1P50616 345 aaPredicted RBP26.29■■□□□ 1.8
NPAS3-206ENST00000548645 GRIN1Q05586 938 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 NOM1Q5C9Z4 860 aaKnown RBP26.29■■□□□ 1.8
NPAS3-206ENST00000548645 SPATA1Q5VX52 437 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 SPATA20Q8TB22 786 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 CPLX3Q8WVH0 158 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 CTAGE1Q96RT6 745 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 RGPD5Q99666 1765 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 APPP05067 770 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 PIP4K2BP78356 416 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 APTXQ7Z2E3 356 aaKnown RBP26.29■■□□□ 1.8
NPAS3-206ENST00000548645 GRAMD1CQ8IYS0 662 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 FAN1Q9Y2M0 1017 aa26.29■■□□□ 1.8
NPAS3-206ENST00000548645 MFAP3LO75121 409 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 FMNL1O95466 1100 aaPredicted RBP26.28■■□□□ 1.8
NPAS3-206ENST00000548645 MMP1P03956 469 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 WHAMMP3Q1A5X7 153 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 NKX2-3Q8TAU0 364 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 CCDC51Q96ER9 411 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 ACBD3Q9H3P7 528 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 LY9Q9HBG7 655 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 CTAGE15A4D2H0 777 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 ACTN4O43707 911 aaKnown RBP26.28■■□□□ 1.8
NPAS3-206ENST00000548645 CTAGE8P0CG41 777 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 ZC3H6P61129 1189 aaKnown RBP26.28■■□□□ 1.8
NPAS3-206ENST00000548645 FILIP1LQ4L180 1135 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 TMEM67Q5HYA8 995 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 CTAGE6Q86UF2 777 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 CNGA4Q8IV77 575 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 CTAGE4Q8IX94 777 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 DIS3L2Q8IYB7 885 aaKnown RBP26.28■■□□□ 1.8
NPAS3-206ENST00000548645 GOLGA6L1Q8N7Z2 621 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 FAM71BQ8TC56 605 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 TJP1Q07157 1748 aa26.28■■□□□ 1.8
NPAS3-206ENST00000548645 PI16Q6UXB8 463 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms