RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 TNKSO95271 1327 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 CHD4Q14839 1912 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 GOLGA8AA7E2F4 631 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 SMIM22K7EJ46 135 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 PRDM1O75626 825 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 SCNN1DP51172 638 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 RHBDL3P58872 404 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 FOXD4L6Q3SYB3 417 aaPredicted RBP9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 DACT2Q5SW24 774 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 HHIPL2Q6UWX4 724 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 FOXD4L3Q6VB84 417 aaPredicted RBP9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 MICU3Q86XE3 530 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 PSMD1Q99460 953 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 ZNF287Q9HBT7 754 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 SENP2Q9HC62 589 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 PIM2Q9P1W9 311 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 SAP30BPQ9UHR5 308 aaKnown RBP9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 LAMB1P07942 1786 aa9.14□□□□□ -0.95
TMEM106C-208ENST00000548355 ROBO3Q96MS0 1386 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 MYH2Q9UKX2 1941 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 FLT1P17948 1338 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 TSPY2A6NKD2 308 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 PRPF40AO75400 957 aaKnown RBP9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 RCAN1P53805 252 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 HDLBPQ00341 1268 aaKnown RBP9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 SLC4A8Q2Y0W8 1093 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 IFIT1BQ5T764 474 aaKnown RBP9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 CDC37L1Q7L3B6 337 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 KIAA0825Q8IV33 1275 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 CCDC144CPQ8IYA2 1237 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 ZNF654Q8IZM8 581 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 UPF1Q92900 1129 aaKnown RBP eCLIP9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 MRIQ9BWK5 157 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 VPS33BQ9H267 617 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 KCNQ5Q9NR82 932 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 LMBRD1Q9NUN5 540 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 USP40Q9NVE5 1235 aa9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 ORC3Q9UBD5 711 aaPredicted RBP9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 PPP1R1BQ9UD71 204 aaPredicted RBP9.13□□□□□ -0.95
TMEM106C-208ENST00000548355 KIF13BQ9NQT8 1826 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 BAZ2AQ9UIF9 1905 aaKnown RBP9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CCDC196A0A1B0GTZ2 297 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CALM1P0DP23 149 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CALM2P0DP24 149 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CALM3P0DP25 149 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 NCLP19338 710 aaKnown RBP9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 RXRAP19793 462 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 ADD1P35611 737 aaKnown RBP9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CRKP46108 304 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 RBM5P52756 815 aaKnown RBP eCLIP9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 FOSBP53539 338 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 EVX2Q03828 476 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 PICALMQ13492 652 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 SEC23AQ15436 765 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 RTN1Q16799 776 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CSPP1Q1MSJ5 1256 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CCDC178Q5BJE1 867 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 FAM47AQ5JRC9 791 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CATIPQ7Z7H3 387 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 FERMT3Q86UX7 667 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 ZNF444Q8N0Y2 327 aaPredicted RBP9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 KLHL34Q8N239 644 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 ENAHQ8N8S7 591 aaPredicted RBP9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 NUP133Q8WUM0 1156 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 DYNLL2Q96FJ2 89 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 CHAMP1Q96JM3 812 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 ZDHHC15Q96MV8 337 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 MYL10Q9BUA6 226 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 ZSCAN16Q9H4T2 348 aaPredicted RBP9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 SERPINA10Q9UK55 444 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 DDX49Q9Y6V7 483 aaKnown RBP9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 NAV1Q8NEY1 1877 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 NID2Q14112 1375 aa9.12□□□□□ -0.95
TMEM106C-208ENST00000548355 MYO3BQ8WXR4 1341 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 PPFIA3O75145 1194 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 TSPY3P0CV98 308 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 TSPY8P0CW00 308 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 FDPSP14324 419 aaKnown RBP9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 CDC27P30260 824 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 IARSP41252 1262 aaKnown RBP9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 PLCD1P51178 756 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 KRT85P78386 507 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 TFAP4Q01664 338 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 SSRP1Q08945 709 aaKnown RBP9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 GSE1Q14687 1217 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 PPP2R5BQ15173 497 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 APOBEC3HQ6NTF7 200 aaKnown RBP9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 CDC42EP5Q6NZY7 148 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 C16orf86Q6ZW13 317 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 TTC6Q86TZ1 520 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 FANCBQ8NB91 859 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 C8orf76Q96K31 380 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 ZNF277Q9NRM2 450 aaPredicted RBP9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 CNPY2Q9Y2B0 182 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 CD2APQ9Y5K6 639 aa9.11□□□□□ -0.95
TMEM106C-208ENST00000548355 STK36Q9NRP7 1315 aa9.1□□□□□ -0.95
TMEM106C-208ENST00000548355 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms