RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 VTI1BQ9UEU0 232 aa6.89□□□□□ -1.31
RPAP3-206ENST00000548296 TMEM265A0A087WTH1 108 aa6.88□□□□□ -1.31
RPAP3-206ENST00000548296 ZNF792Q3KQV3 632 aa6.88□□□□□ -1.31
RPAP3-206ENST00000548296 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.88□□□□□ -1.31
RPAP3-206ENST00000548296 MAP1SQ66K74 1059 aaPredicted RBP6.88□□□□□ -1.31
RPAP3-206ENST00000548296 NXPE4Q6UWF7 544 aa6.88□□□□□ -1.31
RPAP3-206ENST00000548296 PI16Q6UXB8 463 aa6.88□□□□□ -1.31
RPAP3-206ENST00000548296 PLD6Q8N2A8 252 aaKnown RBP6.88□□□□□ -1.31
RPAP3-206ENST00000548296 DUSP23Q9BVJ7 150 aa6.88□□□□□ -1.31
RPAP3-206ENST00000548296 FUT4P22083 530 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 EIF4BP23588 611 aaKnown RBP6.87□□□□□ -1.31
RPAP3-206ENST00000548296 GSTT1P30711 240 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 BNIP3Q12983 259 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 SCARA3Q6AZY7 606 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 ZNF574Q6ZN55 896 aaPredicted RBP6.87□□□□□ -1.31
RPAP3-206ENST00000548296 ATG4DQ86TL0 474 aaPredicted RBP6.87□□□□□ -1.31
RPAP3-206ENST00000548296 TMEM87AQ8NBN3 555 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 ISL2Q96A47 359 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 ACSBG1Q96GR2 724 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 HRASLS5Q96KN8 279 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 FAM8A1Q9UBU6 413 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 SNX11Q9Y5W9 270 aa6.87□□□□□ -1.31
RPAP3-206ENST00000548296 CTSHP09668 335 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 ZNF252P-AS1Q0IIN9 211 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 FAM181AQ8N9Y4 354 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 PI4K2BQ8TCG2 481 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 C8orf37Q96NL8 207 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 OSBPL7Q9BZF2 842 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 CBX8Q9HC52 389 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 GTF2IRD1Q9UHL9 959 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 PPM1HQ9ULR3 514 aa6.86□□□□□ -1.31
RPAP3-206ENST00000548296 LEFTY1O75610 366 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 PAPLNO95428 1278 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 CEACAM5P06731 702 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 NEFMP07197 916 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 CD8BP10966 210 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 OXCT1P55809 520 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 HDLBPQ00341 1268 aaKnown RBP6.85□□□□□ -1.31
RPAP3-206ENST00000548296 FANCCQ00597 558 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 LRRC14Q15048 493 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 AOC3Q16853 763 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 STK35Q8TDR2 534 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 GPBAR1Q8TDU6 330 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 NECAB3Q96P71 396 aaPredicted RBP6.85□□□□□ -1.31
RPAP3-206ENST00000548296 CACNA2D2Q9NY47 1150 aa6.85□□□□□ -1.31
RPAP3-206ENST00000548296 USP31Q70CQ4 1352 aa6.84□□□□□ -1.31
RPAP3-206ENST00000548296 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
RPAP3-206ENST00000548296 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
RPAP3-206ENST00000548296 TRIM37O94972 964 aa6.84□□□□□ -1.31
RPAP3-206ENST00000548296 METTL16Q86W50 562 aaKnown RBP6.84□□□□□ -1.31
RPAP3-206ENST00000548296 WFDC3Q8IUB2 231 aa6.84□□□□□ -1.31
RPAP3-206ENST00000548296 TOP6BLQ8N6T0 577 aa6.84□□□□□ -1.31
RPAP3-206ENST00000548296 KCT2Q8NC54 265 aa6.84□□□□□ -1.31
RPAP3-206ENST00000548296 RC3H2Q9HBD1 1191 aaKnown RBP6.84□□□□□ -1.31
RPAP3-206ENST00000548296 PICK1Q9NRD5 415 aa6.84□□□□□ -1.31
RPAP3-206ENST00000548296 FANCGO15287 622 aa6.83□□□□□ -1.32
RPAP3-206ENST00000548296 C8AP07357 584 aa6.83□□□□□ -1.32
RPAP3-206ENST00000548296 ST13P50502 369 aaKnown RBP6.83□□□□□ -1.32
RPAP3-206ENST00000548296 ANGEL2Q5VTE6 544 aaKnown RBP6.83□□□□□ -1.32
RPAP3-206ENST00000548296 CDC37L1Q7L3B6 337 aa6.83□□□□□ -1.32
RPAP3-206ENST00000548296 C3orf58Q8NDZ4 430 aa6.83□□□□□ -1.32
RPAP3-206ENST00000548296 ANKRD24Q8TF21 1146 aa6.83□□□□□ -1.32
RPAP3-206ENST00000548296 ASB11Q8WXH4 323 aa6.83□□□□□ -1.32
RPAP3-206ENST00000548296 RNF34Q969K3 372 aa6.83□□□□□ -1.32
RPAP3-206ENST00000548296 CYP8B1Q9UNU6 501 aa6.83□□□□□ -1.32
RPAP3-206ENST00000548296 RNASE1P07998 156 aaKnown RBP6.82□□□□□ -1.32
RPAP3-206ENST00000548296 BMP6P22004 513 aa6.82□□□□□ -1.32
RPAP3-206ENST00000548296 ZNF76P36508 570 aa6.82□□□□□ -1.32
RPAP3-206ENST00000548296 ZC3H6P61129 1189 aaKnown RBP6.82□□□□□ -1.32
RPAP3-206ENST00000548296 RAD51AP2Q09MP3 1159 aa6.82□□□□□ -1.32
RPAP3-206ENST00000548296 SLC23A3Q6PIS1 610 aa6.82□□□□□ -1.32
RPAP3-206ENST00000548296 TPTE2Q6XPS3 522 aa6.82□□□□□ -1.32
RPAP3-206ENST00000548296 TMEM40Q8WWA1 233 aa6.82□□□□□ -1.32
RPAP3-206ENST00000548296 TNKS2Q9H2K2 1166 aa6.82□□□□□ -1.32
RPAP3-206ENST00000548296 PRDM10Q9NQV6 1147 aa6.82□□□□□ -1.32
RPAP3-206ENST00000548296 MBNL3Q9NUK0 354 aaKnown RBP6.82□□□□□ -1.32
RPAP3-206ENST00000548296 USP17L7P0C7H9 530 aa6.81□□□□□ -1.32
RPAP3-206ENST00000548296 ERCC5P28715 1186 aaPredicted RBP6.81□□□□□ -1.32
RPAP3-206ENST00000548296 PPM1JQ5JR12 505 aa6.81□□□□□ -1.32
RPAP3-206ENST00000548296 LLGL2Q6P1M3 1020 aa6.81□□□□□ -1.32
RPAP3-206ENST00000548296 PLAGL2Q9UPG8 496 aa6.81□□□□□ -1.32
RPAP3-206ENST00000548296 ENC1O14682 589 aa6.8□□□□□ -1.32
RPAP3-206ENST00000548296 ITIH2P19823 946 aa6.8□□□□□ -1.32
RPAP3-206ENST00000548296 RING1Q06587 406 aa6.8□□□□□ -1.32
RPAP3-206ENST00000548296 TAF1CQ15572 869 aaPredicted RBP6.8□□□□□ -1.32
RPAP3-206ENST00000548296 NT5DC4Q86YG4 428 aa6.8□□□□□ -1.32
RPAP3-206ENST00000548296 FAM168AQ92567 244 aa6.8□□□□□ -1.32
RPAP3-206ENST00000548296 HEXIM2Q96MH2 286 aaKnown RBP6.8□□□□□ -1.32
RPAP3-206ENST00000548296 TGIF2Q9GZN2 237 aa6.8□□□□□ -1.32
RPAP3-206ENST00000548296 FARP2O94887 1054 aaPredicted RBP6.79□□□□□ -1.32
RPAP3-206ENST00000548296 FAM214BQ7L5A3 538 aa6.79□□□□□ -1.32
RPAP3-206ENST00000548296 C12orf40Q86WS4 652 aa6.79□□□□□ -1.32
RPAP3-206ENST00000548296 ZNF507Q8TCN5 953 aa6.79□□□□□ -1.32
RPAP3-206ENST00000548296 GRIN3AQ8TCU5 1115 aa6.79□□□□□ -1.32
RPAP3-206ENST00000548296 PCDHA4Q9UN74 947 aa6.79□□□□□ -1.32
RPAP3-206ENST00000548296 CSADQ9Y600 493 aa6.79□□□□□ -1.32
RPAP3-206ENST00000548296 U3KQE9 123 aa6.79□□□□□ -1.32
RPAP3-206ENST00000548296 CARMIL2Q6F5E8 1435 aa6.78□□□□□ -1.32
RPAP3-206ENST00000548296 GNAT3A8MTJ3 354 aa6.78□□□□□ -1.32
RPAP3-206ENST00000548296 DCDC2CA8MYV0 355 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms