RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 PICALMQ13492 652 aa19.67■□□□□ 0.74
SVOP-202ENST00000548229 PDS5AQ29RF7 1337 aaKnown RBP19.67■□□□□ 0.74
SVOP-202ENST00000548229 XRCC5P13010 732 aaKnown RBP19.66■□□□□ 0.74
SVOP-202ENST00000548229 FAM109BQ6ICB4 259 aaPredicted RBP19.66■□□□□ 0.74
SVOP-202ENST00000548229 SOCS4Q8WXH5 440 aa19.66■□□□□ 0.74
SVOP-202ENST00000548229 ASCC2Q9H1I8 757 aaPredicted RBP19.66■□□□□ 0.74
SVOP-202ENST00000548229 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.66■□□□□ 0.74
SVOP-202ENST00000548229 MORF4L1Q9UBU8 362 aa19.66■□□□□ 0.74
SVOP-202ENST00000548229 ABCF2Q9UG63 623 aa19.66■□□□□ 0.74
SVOP-202ENST00000548229 HDAC5Q9UQL6 1122 aa19.66■□□□□ 0.74
SVOP-202ENST00000548229 MYH2Q9UKX2 1941 aa19.66■□□□□ 0.74
SVOP-202ENST00000548229 PHIPQ8WWQ0 1821 aa19.65■□□□□ 0.74
SVOP-202ENST00000548229 IL15P40933 162 aaPredicted RBP19.65■□□□□ 0.74
SVOP-202ENST00000548229 BTDP43251 543 aa19.65■□□□□ 0.74
SVOP-202ENST00000548229 PHKA1P46020 1223 aa19.65■□□□□ 0.74
SVOP-202ENST00000548229 MAP3K21Q5TCX8 1036 aa19.65■□□□□ 0.74
SVOP-202ENST00000548229 MRPL50Q8N5N7 158 aaKnown RBP19.65■□□□□ 0.74
SVOP-202ENST00000548229 NUDT12Q9BQG2 462 aa19.65■□□□□ 0.74
SVOP-202ENST00000548229 COL25A1Q9BXS0 654 aaPredicted RBP19.65■□□□□ 0.74
SVOP-202ENST00000548229 AS3MTQ9HBK9 375 aa19.65■□□□□ 0.74
SVOP-202ENST00000548229 DDX4Q9NQI0 724 aaKnown RBP19.65■□□□□ 0.74
SVOP-202ENST00000548229 USP17L5A8MUK1 530 aa19.64■□□□□ 0.73
SVOP-202ENST00000548229 PRKAR2AP13861 404 aaKnown RBP19.64■□□□□ 0.73
SVOP-202ENST00000548229 HMGCS2P54868 508 aa19.64■□□□□ 0.73
SVOP-202ENST00000548229 SH3D19Q5HYK7 790 aa19.64■□□□□ 0.73
SVOP-202ENST00000548229 CCDC102BQ68D86 513 aa19.64■□□□□ 0.73
SVOP-202ENST00000548229 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.64■□□□□ 0.73
SVOP-202ENST00000548229 SIL1Q9H173 461 aa19.64■□□□□ 0.73
SVOP-202ENST00000548229 MROH7-TTC4A0A0A0MT08 1334 aa19.64■□□□□ 0.73
SVOP-202ENST00000548229 GPR75-ASB3A0A0A6YYF3 556 aa19.63■□□□□ 0.73
SVOP-202ENST00000548229 IRX3P78415 501 aaPredicted RBP19.63■□□□□ 0.73
SVOP-202ENST00000548229 TRIM32Q13049 653 aa19.63■□□□□ 0.73
SVOP-202ENST00000548229 PDE3AQ14432 1141 aa19.63■□□□□ 0.73
SVOP-202ENST00000548229 CCDC84Q86UT8 332 aaPredicted RBP19.63■□□□□ 0.73
SVOP-202ENST00000548229 TRIB2Q92519 343 aa19.63■□□□□ 0.73
SVOP-202ENST00000548229 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.63■□□□□ 0.73
SVOP-202ENST00000548229 DDX60LQ5H9U9 1706 aaKnown RBP19.62■□□□□ 0.73
SVOP-202ENST00000548229 PFASO15067 1338 aa19.62■□□□□ 0.73
SVOP-202ENST00000548229 LDHCP07864 332 aa19.62■□□□□ 0.73
SVOP-202ENST00000548229 COL6A1P12109 1028 aa19.62■□□□□ 0.73
SVOP-202ENST00000548229 CYP2B6P20813 491 aa19.62■□□□□ 0.73
SVOP-202ENST00000548229 CAP2P40123 477 aa19.62■□□□□ 0.73
SVOP-202ENST00000548229 GSTO1P78417 241 aa19.62■□□□□ 0.73
SVOP-202ENST00000548229 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
SVOP-202ENST00000548229 CCAR1Q8IX12 1150 aaKnown RBP19.62■□□□□ 0.73
SVOP-202ENST00000548229 GPRC5AQ8NFJ5 357 aa19.62■□□□□ 0.73
SVOP-202ENST00000548229 HERC5Q9UII4 1024 aaKnown RBP19.62■□□□□ 0.73
SVOP-202ENST00000548229 POTEB2H3BUK9 544 aa19.61■□□□□ 0.73
SVOP-202ENST00000548229 MAPK4P31152 587 aa19.61■□□□□ 0.73
SVOP-202ENST00000548229 HOXA7P31268 230 aaPredicted RBP19.61■□□□□ 0.73
SVOP-202ENST00000548229 RHBDL3P58872 404 aa19.61■□□□□ 0.73
SVOP-202ENST00000548229 LBHD1Q9BQE6 289 aaPredicted RBP19.61■□□□□ 0.73
SVOP-202ENST00000548229 TMOD4Q9NZQ9 345 aa19.61■□□□□ 0.73
SVOP-202ENST00000548229 COL2A1P02458 1487 aaPredicted RBP19.6■□□□□ 0.73
SVOP-202ENST00000548229 UBTFL1P0CB47 393 aaPredicted RBP19.6■□□□□ 0.73
SVOP-202ENST00000548229 SLURP2P0DP57 97 aa19.6■□□□□ 0.73
SVOP-202ENST00000548229 ZKSCAN1P17029 563 aaPredicted RBP19.6■□□□□ 0.73
SVOP-202ENST00000548229 RASGRF1Q13972 1273 aa19.6■□□□□ 0.73
SVOP-202ENST00000548229 GTF3C2Q8WUA4 911 aaPredicted RBP19.6■□□□□ 0.73
SVOP-202ENST00000548229 WDR18Q9BV38 432 aa19.6■□□□□ 0.73
SVOP-202ENST00000548229 LOC285556D6RIA3 1793 aa19.6■□□□□ 0.73
SVOP-202ENST00000548229 MECOMQ03112 1051 aa19.59■□□□□ 0.73
SVOP-202ENST00000548229 AKAP2Q9Y2D5 859 aa19.59■□□□□ 0.73
SVOP-202ENST00000548229 EYSQ5T1H1 3165 aa19.59■□□□□ 0.73
SVOP-202ENST00000548229 C19orf81C9J6K1 198 aa19.58■□□□□ 0.72
SVOP-202ENST00000548229 ASNSP08243 561 aa19.58■□□□□ 0.72
SVOP-202ENST00000548229 RGS2P41220 211 aa19.58■□□□□ 0.72
SVOP-202ENST00000548229 BACE1P56817 501 aa19.58■□□□□ 0.72
SVOP-202ENST00000548229 MDM2Q00987 491 aaPredicted RBP19.58■□□□□ 0.72
SVOP-202ENST00000548229 CACNB2Q08289 660 aaPredicted RBP19.58■□□□□ 0.72
SVOP-202ENST00000548229 MVPQ14764 893 aaKnown RBP19.58■□□□□ 0.72
SVOP-202ENST00000548229 PI4KBQ9UBF8 816 aa19.58■□□□□ 0.72
SVOP-202ENST00000548229 FAM196BA6NMK8 535 aa19.57■□□□□ 0.72
SVOP-202ENST00000548229 ADORA1P30542 326 aa19.57■□□□□ 0.72
SVOP-202ENST00000548229 HERVK_113P62684 666 aa19.57■□□□□ 0.72
SVOP-202ENST00000548229 LRRC26Q2I0M4 334 aa19.57■□□□□ 0.72
SVOP-202ENST00000548229 P2RX7Q99572 595 aaKnown RBP19.57■□□□□ 0.72
SVOP-202ENST00000548229 DHX36Q9H2U1 1008 aaKnown RBP19.57■□□□□ 0.72
SVOP-202ENST00000548229 COPRSQ9NQ92 184 aa19.57■□□□□ 0.72
SVOP-202ENST00000548229 GINM1Q9NU53 330 aa19.57■□□□□ 0.72
SVOP-202ENST00000548229 PRUNE2Q8WUY3 3088 aa19.56■□□□□ 0.72
SVOP-202ENST00000548229 TIMM10P62072 90 aa19.56■□□□□ 0.72
SVOP-202ENST00000548229 ZNF697Q5TEC3 545 aa19.56■□□□□ 0.72
SVOP-202ENST00000548229 LHX8Q68G74 356 aa19.56■□□□□ 0.72
SVOP-202ENST00000548229 SSH1Q8WYL5 1049 aa19.56■□□□□ 0.72
SVOP-202ENST00000548229 PRKAG2Q9UGJ0 569 aa19.56■□□□□ 0.72
SVOP-202ENST00000548229 GLRX3O76003 335 aaKnown RBP19.55■□□□□ 0.72
SVOP-202ENST00000548229 MTMR2Q13614 643 aa19.55■□□□□ 0.72
SVOP-202ENST00000548229 USP6NLQ92738 828 aa19.55■□□□□ 0.72
SVOP-202ENST00000548229 GUCD1Q96NT3 240 aa19.55■□□□□ 0.72
SVOP-202ENST00000548229 APBA2Q99767 749 aa19.55■□□□□ 0.72
SVOP-202ENST00000548229 NOL10Q9BSC4 688 aaKnown RBP19.55■□□□□ 0.72
SVOP-202ENST00000548229 CWC22Q9HCG8 908 aaKnown RBP19.55■□□□□ 0.72
SVOP-202ENST00000548229 PLXNB2O15031 1838 aa19.54■□□□□ 0.72
SVOP-202ENST00000548229 A0A1B0GUL7 405 aa19.54■□□□□ 0.72
SVOP-202ENST00000548229 USP17L10C9JJH3 530 aa19.54■□□□□ 0.72
SVOP-202ENST00000548229 MSCO60682 206 aa19.54■□□□□ 0.72
SVOP-202ENST00000548229 ERVK-9P63128 1117 aa19.54■□□□□ 0.72
SVOP-202ENST00000548229 ERVK-24P63145 666 aa19.54■□□□□ 0.72
SVOP-202ENST00000548229 ALDH1L2Q3SY69 923 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms