RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 NPM3O75607 178 aaKnown RBP20.77■□□□□ 0.92
HDAC7-227ENST00000548080 MAP3K11Q16584 847 aa20.77■□□□□ 0.92
HDAC7-227ENST00000548080 DCAF15Q66K64 600 aa20.77■□□□□ 0.92
HDAC7-227ENST00000548080 RASAL3Q86YV0 1011 aa20.77■□□□□ 0.92
HDAC7-227ENST00000548080 ZKSCAN4Q969J2 545 aaPredicted RBP20.77■□□□□ 0.92
HDAC7-227ENST00000548080 ELP3Q9H9T3 547 aa20.77■□□□□ 0.92
HDAC7-227ENST00000548080 DDX60LQ5H9U9 1706 aaKnown RBP20.77■□□□□ 0.92
HDAC7-227ENST00000548080 FAM155AB1AL88 458 aaPredicted RBP20.76■□□□□ 0.91
HDAC7-227ENST00000548080 ZFYP08048 801 aaPredicted RBP20.76■□□□□ 0.91
HDAC7-227ENST00000548080 INPP5BP32019 993 aa20.76■□□□□ 0.91
HDAC7-227ENST00000548080 CCDC129Q6ZRS4 1044 aa20.76■□□□□ 0.91
HDAC7-227ENST00000548080 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.76■□□□□ 0.91
HDAC7-227ENST00000548080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.76■□□□□ 0.91
HDAC7-227ENST00000548080 HHIPL1Q96JK4 782 aa20.76■□□□□ 0.91
HDAC7-227ENST00000548080 ZNF341Q9BYN7 854 aa20.76■□□□□ 0.91
HDAC7-227ENST00000548080 VGLL4Q14135 290 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 ZMYM1Q5SVZ6 1142 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 CERS3Q8IU89 383 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 HOOK2Q96ED9 719 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 SLC4A4Q9Y6R1 1079 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 COL2A1P02458 1487 aaPredicted RBP20.75■□□□□ 0.91
HDAC7-227ENST00000548080 PCNTO95613 3336 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 GPAA1O43292 621 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 SLC10A3P09131 477 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 CYP2D6P10635 497 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 ECE1P42892 770 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 MAP3K9P80192 1104 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 SLC10A4Q96EP9 437 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 STRBPQ96SI9 672 aaKnown RBP20.75■□□□□ 0.91
HDAC7-227ENST00000548080 LSG1Q9H089 658 aaKnown RBP20.75■□□□□ 0.91
HDAC7-227ENST00000548080 HELLSQ9NRZ9 838 aa20.75■□□□□ 0.91
HDAC7-227ENST00000548080 MCMDC2Q4G0Z9 681 aa20.74■□□□□ 0.91
HDAC7-227ENST00000548080 ANKRD13AQ8IZ07 590 aa20.74■□□□□ 0.91
HDAC7-227ENST00000548080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.74■□□□□ 0.91
HDAC7-227ENST00000548080 DCP1AQ9NPI6 582 aaPredicted RBP20.74■□□□□ 0.91
HDAC7-227ENST00000548080 MCM9Q9NXL9 1143 aa20.74■□□□□ 0.91
HDAC7-227ENST00000548080 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.74■□□□□ 0.91
HDAC7-227ENST00000548080 CYP2D7A0A087X1C5 515 aa20.73■□□□□ 0.91
HDAC7-227ENST00000548080 SMIM22K7EJ46 135 aa20.73■□□□□ 0.91
HDAC7-227ENST00000548080 MCCP23508 829 aa20.73■□□□□ 0.91
HDAC7-227ENST00000548080 GJA5P36382 358 aa20.73■□□□□ 0.91
HDAC7-227ENST00000548080 DDRGK1Q96HY6 314 aa20.73■□□□□ 0.91
HDAC7-227ENST00000548080 DNAJC18Q9H819 358 aa20.73■□□□□ 0.91
HDAC7-227ENST00000548080 SNCAIPQ9Y6H5 919 aa20.73■□□□□ 0.91
HDAC7-227ENST00000548080 PLCD1P51178 756 aa20.72■□□□□ 0.91
HDAC7-227ENST00000548080 THSD7BQ9C0I4 1608 aa20.72■□□□□ 0.91
HDAC7-227ENST00000548080 CSADQ9Y600 493 aa20.72■□□□□ 0.91
HDAC7-227ENST00000548080 PHF20L1A8MW92 1017 aa20.71■□□□□ 0.91
HDAC7-227ENST00000548080 POLR3DP05423 398 aaPredicted RBP20.71■□□□□ 0.91
HDAC7-227ENST00000548080 HLA-DOAP06340 250 aa20.71■□□□□ 0.91
HDAC7-227ENST00000548080 RRP1BQ14684 758 aaKnown RBP20.71■□□□□ 0.91
HDAC7-227ENST00000548080 CRACR2BQ8N4Y2 399 aaPredicted RBP20.71■□□□□ 0.91
HDAC7-227ENST00000548080 CCDC102AQ96A19 550 aa20.71■□□□□ 0.91
HDAC7-227ENST00000548080 WNK4Q96J92 1243 aa20.71■□□□□ 0.91
HDAC7-227ENST00000548080 DHX36Q9H2U1 1008 aaKnown RBP20.71■□□□□ 0.91
HDAC7-227ENST00000548080 PI4KBQ9UBF8 816 aa20.71■□□□□ 0.91
HDAC7-227ENST00000548080 ZNF112Q9UJU3 913 aa20.71■□□□□ 0.91
HDAC7-227ENST00000548080 CCDC171Q6TFL3 1326 aa20.7■□□□□ 0.9
HDAC7-227ENST00000548080 KIF23Q02241 960 aaPredicted RBP20.7■□□□□ 0.9
HDAC7-227ENST00000548080 PTH1RQ03431 593 aa20.7■□□□□ 0.9
HDAC7-227ENST00000548080 SHROOM1Q2M3G4 852 aaPredicted RBP20.7■□□□□ 0.9
HDAC7-227ENST00000548080 ZNF589Q86UQ0 364 aaPredicted RBP20.7■□□□□ 0.9
HDAC7-227ENST00000548080 CCDC84Q86UT8 332 aaPredicted RBP20.7■□□□□ 0.9
HDAC7-227ENST00000548080 OPTNQ96CV9 577 aa20.7■□□□□ 0.9
HDAC7-227ENST00000548080 EPB41L4AQ9HCS5 686 aaPredicted RBP20.7■□□□□ 0.9
HDAC7-227ENST00000548080 DOCK1Q14185 1865 aa20.7■□□□□ 0.9
HDAC7-227ENST00000548080 ATAD5Q96QE3 1844 aa20.7■□□□□ 0.9
HDAC7-227ENST00000548080 GSG1L2A8MUP6 293 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 MAP3K10Q02779 954 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 SPRYD7Q5W111 196 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 JMYQ8N9B5 988 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 OTUD5Q96G74 571 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 IPO9Q96P70 1041 aaKnown RBP20.69■□□□□ 0.9
HDAC7-227ENST00000548080 KIF2CQ99661 725 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 TRIM34Q9BYJ4 488 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 APPP05067 770 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 NOGQ13253 232 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 STK11IPQ8N1F8 1099 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 DYNLL2Q96FJ2 89 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 ATP8A2Q9NTI2 1148 aa20.69■□□□□ 0.9
HDAC7-227ENST00000548080 USP17L12C9JPN9 530 aa20.68■□□□□ 0.9
HDAC7-227ENST00000548080 USP17L21D6R901 530 aa20.68■□□□□ 0.9
HDAC7-227ENST00000548080 TBC1D12O60347 775 aa20.68■□□□□ 0.9
HDAC7-227ENST00000548080 GDF11O95390 407 aa20.68■□□□□ 0.9
HDAC7-227ENST00000548080 HSPA4P34932 840 aa20.68■□□□□ 0.9
HDAC7-227ENST00000548080 VPS53Q5VIR6 699 aa20.68■□□□□ 0.9
HDAC7-227ENST00000548080 MAP4K1Q92918 833 aa20.68■□□□□ 0.9
HDAC7-227ENST00000548080 ANAPC15P60006 121 aa20.67■□□□□ 0.9
HDAC7-227ENST00000548080 JAG1P78504 1218 aa20.67■□□□□ 0.9
HDAC7-227ENST00000548080 CTR9Q6PD62 1173 aa20.67■□□□□ 0.9
HDAC7-227ENST00000548080 TTC6Q86TZ1 520 aa20.67■□□□□ 0.9
HDAC7-227ENST00000548080 SLC44A5Q8NCS7 719 aa20.67■□□□□ 0.9
HDAC7-227ENST00000548080 HERC5Q9UII4 1024 aaKnown RBP20.67■□□□□ 0.9
HDAC7-227ENST00000548080 FOXP2O15409 715 aa20.66■□□□□ 0.9
HDAC7-227ENST00000548080 FOXP4Q8IVH2 680 aaPredicted RBP20.66■□□□□ 0.9
HDAC7-227ENST00000548080 SCYL3Q8IZE3 742 aa20.66■□□□□ 0.9
HDAC7-227ENST00000548080 SERPINB13Q9UIV8 391 aa20.66■□□□□ 0.9
HDAC7-227ENST00000548080 LAMB1P07942 1786 aa20.65■□□□□ 0.9
HDAC7-227ENST00000548080 SPDYE5A6NIY4 337 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms