RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 PI4KBQ9UBF8 816 aa17.58■□□□□ 0.4
SEC23A-204ENST00000548032 MYO5AQ9Y4I1 1855 aaKnown RBP17.57■□□□□ 0.4
SEC23A-204ENST00000548032 ZNF532Q9HCE3 1301 aa17.57■□□□□ 0.4
SEC23A-204ENST00000548032 MAGEB6P1A0A0J9YX57 407 aa17.57■□□□□ 0.4
SEC23A-204ENST00000548032 PTPRAP18433 802 aa17.57■□□□□ 0.4
SEC23A-204ENST00000548032 TMED8Q6PL24 325 aaPredicted RBP17.57■□□□□ 0.4
SEC23A-204ENST00000548032 CERS3Q8IU89 383 aa17.57■□□□□ 0.4
SEC23A-204ENST00000548032 CRACR2BQ8N4Y2 399 aaPredicted RBP17.57■□□□□ 0.4
SEC23A-204ENST00000548032 GPATCH3Q96I76 525 aa17.57■□□□□ 0.4
SEC23A-204ENST00000548032 ZFYVE28Q9HCC9 887 aa17.57■□□□□ 0.4
SEC23A-204ENST00000548032 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
SEC23A-204ENST00000548032 KCNH4Q9UQ05 1017 aa17.57■□□□□ 0.4
SEC23A-204ENST00000548032 HLA-DOAP06340 250 aa17.56■□□□□ 0.4
SEC23A-204ENST00000548032 PKN2Q16513 984 aaKnown RBP17.56■□□□□ 0.4
SEC23A-204ENST00000548032 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
SEC23A-204ENST00000548032 CCDC84Q86UT8 332 aaPredicted RBP17.56■□□□□ 0.4
SEC23A-204ENST00000548032 HERC5Q9UII4 1024 aaKnown RBP17.56■□□□□ 0.4
SEC23A-204ENST00000548032 HPS5Q9UPZ3 1129 aa17.56■□□□□ 0.4
SEC23A-204ENST00000548032 CXCL11O14625 94 aa17.55■□□□□ 0.4
SEC23A-204ENST00000548032 SLFNL1Q499Z3 407 aa17.55■□□□□ 0.4
SEC23A-204ENST00000548032 RIOK1Q9BRS2 568 aaKnown RBP17.55■□□□□ 0.4
SEC23A-204ENST00000548032 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.55■□□□□ 0.41e-7■■■■■ 29
SEC23A-204ENST00000548032 PDE4DIPQ5VU43 2346 aa17.54■□□□□ 0.4
SEC23A-204ENST00000548032 LAMB1P07942 1786 aa17.54■□□□□ 0.4
SEC23A-204ENST00000548032 TCRBV5S4A2TA0A5A2 114 aa17.54■□□□□ 0.4
SEC23A-204ENST00000548032 TRIM75PA6NK02 468 aa17.54■□□□□ 0.4
SEC23A-204ENST00000548032 SLC34A2O95436 690 aa17.54■□□□□ 0.4
SEC23A-204ENST00000548032 RRP1BQ14684 758 aaKnown RBP17.54■□□□□ 0.4
SEC23A-204ENST00000548032 GADL1Q6ZQY3 521 aa17.54■□□□□ 0.4
SEC23A-204ENST00000548032 CD99L2Q8TCZ2 262 aa17.54■□□□□ 0.4
SEC23A-204ENST00000548032 AFG3L2Q9Y4W6 797 aa17.54■□□□□ 0.4
SEC23A-204ENST00000548032 PDHXO00330 501 aa17.53■□□□□ 0.4
SEC23A-204ENST00000548032 ADD2P35612 726 aa17.53■□□□□ 0.4
SEC23A-204ENST00000548032 CAP2P40123 477 aa17.53■□□□□ 0.4
SEC23A-204ENST00000548032 SP3Q02447 781 aa17.53■□□□□ 0.4
SEC23A-204ENST00000548032 ANKRD23Q86SG2 305 aa17.53■□□□□ 0.4
SEC23A-204ENST00000548032 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
SEC23A-204ENST00000548032 LCORLQ8N3X6 602 aa17.53■□□□□ 0.4
SEC23A-204ENST00000548032 ERO1AQ96HE7 468 aa17.53■□□□□ 0.4
SEC23A-204ENST00000548032 CRNKL1Q9BZJ0 848 aaKnown RBP17.53■□□□□ 0.4
SEC23A-204ENST00000548032 ZCCHC17Q9NP64 241 aaKnown RBP17.53■□□□□ 0.4
SEC23A-204ENST00000548032 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
SEC23A-204ENST00000548032 TRIM17Q9Y577 477 aa17.53■□□□□ 0.4
SEC23A-204ENST00000548032 A0A0G2JLL6 359 aaPredicted RBP17.52■□□□□ 0.4
SEC23A-204ENST00000548032 CHGBP05060 677 aa17.52■□□□□ 0.4
SEC23A-204ENST00000548032 MOGSQ13724 837 aa17.52■□□□□ 0.4
SEC23A-204ENST00000548032 FASTKD5Q7L8L6 764 aaKnown RBP17.52■□□□□ 0.4
SEC23A-204ENST00000548032 PRRT2Q7Z6L0 340 aaPredicted RBP17.52■□□□□ 0.4
SEC23A-204ENST00000548032 DNAJC18Q9H819 358 aa17.52■□□□□ 0.4
SEC23A-204ENST00000548032 ARMT1Q9H993 441 aa17.52■□□□□ 0.4
SEC23A-204ENST00000548032 TLR2O60603 784 aa17.51■□□□□ 0.39
SEC23A-204ENST00000548032 MBD4O95243 580 aa17.51■□□□□ 0.39
SEC23A-204ENST00000548032 GDF11O95390 407 aa17.51■□□□□ 0.39
SEC23A-204ENST00000548032 POLR3DP05423 398 aaPredicted RBP17.51■□□□□ 0.39
SEC23A-204ENST00000548032 ANKRD45Q5TZF3 282 aa17.51■□□□□ 0.39
SEC23A-204ENST00000548032 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
SEC23A-204ENST00000548032 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
SEC23A-204ENST00000548032 SDR42E1Q8WUS8 393 aa17.51■□□□□ 0.39
SEC23A-204ENST00000548032 USP17L5A8MUK1 530 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 ECM2O94769 699 aaPredicted RBP17.5■□□□□ 0.39
SEC23A-204ENST00000548032 SPP2Q13103 211 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 SHROOM1Q2M3G4 852 aaPredicted RBP17.5■□□□□ 0.39
SEC23A-204ENST00000548032 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 GPAT2Q6NUI2 795 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 FBXO46Q6PJ61 603 aaPredicted RBP17.5■□□□□ 0.39
SEC23A-204ENST00000548032 OTOP1Q7RTM1 612 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 METTL16Q86W50 562 aaKnown RBP17.5■□□□□ 0.39
SEC23A-204ENST00000548032 ZNF280CQ8ND82 737 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 MCM9Q9NXL9 1143 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 CPA4Q9UI42 421 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 SUPT16HQ9Y5B9 1047 aaKnown RBP17.5■□□□□ 0.39
SEC23A-204ENST00000548032 DOCK1Q14185 1865 aa17.5■□□□□ 0.39
SEC23A-204ENST00000548032 CYP2C8P10632 490 aa17.49■□□□□ 0.39
SEC23A-204ENST00000548032 PLCD1P51178 756 aa17.49■□□□□ 0.39
SEC23A-204ENST00000548032 JAG1P78504 1218 aa17.49■□□□□ 0.39
SEC23A-204ENST00000548032 HDAC1Q13547 482 aaPredicted RBP17.49■□□□□ 0.39
SEC23A-204ENST00000548032 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
SEC23A-204ENST00000548032 PARK7Q99497 189 aaKnown RBP17.49■□□□□ 0.39
SEC23A-204ENST00000548032 EFCC1Q9HA90 598 aa17.49■□□□□ 0.39
SEC23A-204ENST00000548032 SERPINB13Q9UIV8 391 aa17.49■□□□□ 0.39
SEC23A-204ENST00000548032 TNRC18O15417 2968 aaPredicted RBP17.49■□□□□ 0.39
SEC23A-204ENST00000548032 ERC2O15083 957 aa17.48■□□□□ 0.39
SEC23A-204ENST00000548032 PRKAB2O43741 272 aa17.48■□□□□ 0.39
SEC23A-204ENST00000548032 ASNSP08243 561 aa17.48■□□□□ 0.39
SEC23A-204ENST00000548032 UBE3CQ15386 1083 aa17.48■□□□□ 0.39
SEC23A-204ENST00000548032 GCC1Q96CN9 775 aa17.48■□□□□ 0.39
SEC23A-204ENST00000548032 AS3MTQ9HBK9 375 aa17.48■□□□□ 0.39
SEC23A-204ENST00000548032 ZBTB21Q9ULJ3 1066 aa17.48■□□□□ 0.39
SEC23A-204ENST00000548032 CDK5RAP2Q96SN8 1893 aa17.48■□□□□ 0.39
SEC23A-204ENST00000548032 TTC41PQ6P2S7 1318 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 FOCADQ5VW36 1801 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 CYP2D6P10635 497 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 MX1P20591 662 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 HMGCS2P54868 508 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 CAP1Q01518 475 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 AAMPQ13685 434 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 TBC1D2Q9BYX2 928 aa17.47■□□□□ 0.39
SEC23A-204ENST00000548032 EHD4Q9H223 541 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms