RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 PAXIP1Q6ZW49 1069 aaPredicted RBP19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 JMYQ8N9B5 988 aa19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 MIGA1Q8NAN2 632 aa19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 ARMT1Q9H993 441 aa19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 PRAMEF18Q5VWM3 479 aa19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 ZNF384Q8TF68 577 aa19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 GDPD2Q9HCC8 539 aa19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 RBM27Q9P2N5 1060 aaKnown RBP19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 LAMA4Q16363 1823 aa19.45■□□□□ 0.7
CHMP1A-204ENST00000547687 WNT10BO00744 389 aa19.45■□□□□ 0.7
CHMP1A-204ENST00000547687 APPP05067 770 aa19.45■□□□□ 0.7
CHMP1A-204ENST00000547687 PDCP20941 246 aa19.45■□□□□ 0.7
CHMP1A-204ENST00000547687 PRDX5P30044 214 aa19.45■□□□□ 0.7
CHMP1A-204ENST00000547687 EXOSC10Q01780 885 aaKnown RBP19.45■□□□□ 0.7
CHMP1A-204ENST00000547687 LCORLQ8N3X6 602 aa19.45■□□□□ 0.7
CHMP1A-204ENST00000547687 PANK2Q9BZ23 570 aa19.45■□□□□ 0.7
CHMP1A-204ENST00000547687 VPS37CA5D8V6 355 aaPredicted RBP19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 HAND2P61296 217 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 DEFB115Q30KQ5 88 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 SULF1Q8IWU6 871 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 TMEM87AQ8NBN3 555 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 BRF1Q92994 677 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 GTF3C6Q969F1 213 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 NSUN4Q96CB9 384 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 LRRC2Q9BYS8 371 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 CNPY2Q9Y2B0 182 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 ECM29Q5VYK3 1845 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 GRIK5Q16478 980 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 IMMTQ16891 758 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 MFSD14BQ5SR56 506 aa19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 NAA16Q6N069 864 aaPredicted RBP19.44■□□□□ 0.7
CHMP1A-204ENST00000547687 PATL2C9JE40 543 aaKnown RBP19.43■□□□□ 0.7
CHMP1A-204ENST00000547687 MECOMQ03112 1051 aa19.43■□□□□ 0.7
CHMP1A-204ENST00000547687 CYP4F22Q6NT55 531 aa19.43■□□□□ 0.7
CHMP1A-204ENST00000547687 WDR66Q8TBY9 1149 aa19.43■□□□□ 0.7
CHMP1A-204ENST00000547687 TMEM63CQ9P1W3 806 aa19.43■□□□□ 0.7
CHMP1A-204ENST00000547687 RASSF10A6NK89 507 aa19.42■□□□□ 0.7
CHMP1A-204ENST00000547687 PRKAB2O43741 272 aa19.42■□□□□ 0.7
CHMP1A-204ENST00000547687 GADD45BO75293 160 aaPredicted RBP19.42■□□□□ 0.7
CHMP1A-204ENST00000547687 HDAC9Q9UKV0 1011 aa19.42■□□□□ 0.7
CHMP1A-204ENST00000547687 SALL1Q9NSC2 1324 aa19.42■□□□□ 0.7
CHMP1A-204ENST00000547687 CDCA5Q96FF9 252 aa19.42■□□□□ 0.7
CHMP1A-204ENST00000547687 TLL2Q9Y6L7 1015 aa19.42■□□□□ 0.7
CHMP1A-204ENST00000547687 FAM205AQ6ZU69 1335 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 MAGEB6P1A0A0J9YX57 407 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 GSG1L2A8MUP6 293 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 ZNF213O14771 459 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 SAPCD2Q86UD0 394 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 IFNL3Q8IZI9 196 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 AGXT2Q9BYV1 514 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 EPB41L4AQ9HCS5 686 aaPredicted RBP19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 SLC4A4Q9Y6R1 1079 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 PFKFB2O60825 505 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 GNAT2P19087 354 aa19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 RBM5P52756 815 aaKnown RBP eCLIP19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 SPTY2D1Q68D10 685 aaPredicted RBP19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 RIOK1Q9BRS2 568 aaKnown RBP19.41■□□□□ 0.7
CHMP1A-204ENST00000547687 DLGAP5Q15398 846 aa19.4■□□□□ 0.7
CHMP1A-204ENST00000547687 ALX1Q15699 326 aa19.4■□□□□ 0.7
CHMP1A-204ENST00000547687 CFAP100Q494V2 611 aa19.4■□□□□ 0.7
CHMP1A-204ENST00000547687 TTF2Q9UNY4 1162 aaKnown RBP19.4■□□□□ 0.7
CHMP1A-204ENST00000547687 CLRN2A0PK11 232 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 DYNLL1P63167 89 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 DNM1Q05193 864 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 APOBRQ0VD83 1088 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 SCRN1Q12765 414 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 CSPP1Q1MSJ5 1256 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 CAPNS2Q96L46 248 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 MAST2Q6P0Q8 1798 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 JAK2O60674 1132 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 LDHBP07195 334 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 HSPA1AP0DMV8 641 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 HSPA1BP0DMV9 641 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 DZIP1Q86YF9 867 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 SYAP1Q96A49 352 aaPredicted RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 ZBED3Q96IU2 234 aaPredicted RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 PRMT6Q96LA8 375 aaPredicted RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 LLPHQ9BRT6 129 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 NBPF3Q9H094 633 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 NAPBQ9H115 298 aa19.39■□□□□ 0.69
CHMP1A-204ENST00000547687 AOC2O75106 756 aa19.38■□□□□ 0.69
CHMP1A-204ENST00000547687 HUNKP57058 714 aa19.38■□□□□ 0.69
CHMP1A-204ENST00000547687 MOB2Q70IA6 237 aa19.38■□□□□ 0.69
CHMP1A-204ENST00000547687 CHST3Q7LGC8 479 aa19.38■□□□□ 0.69
CHMP1A-204ENST00000547687 UBE2Q2Q8WVN8 375 aa19.38■□□□□ 0.69
CHMP1A-204ENST00000547687 GBA2Q9HCG7 927 aaPredicted RBP19.38■□□□□ 0.69
CHMP1A-204ENST00000547687 ZMYM6O95789 1325 aa19.38■□□□□ 0.69
CHMP1A-204ENST00000547687 FIBPO43427 364 aa19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 SDR42E1Q8WUS8 393 aa19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 NACAP1Q9BZK3 213 aa19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 PITPNM2Q9BZ72 1349 aa19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 SYCE3A1L190 88 aa19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 UBE2HP62256 183 aa19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 FKBP1AP62942 108 aaKnown RBP19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 FBXL16Q8N461 479 aa19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 ZNF274Q96GC6 653 aaPredicted RBP19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 AATFQ9NY61 560 aaKnown RBP eCLIP19.37■□□□□ 0.69
CHMP1A-204ENST00000547687 SPDYE2BA6NHP3 402 aa19.36■□□□□ 0.69
CHMP1A-204ENST00000547687 SPDYE6P0CI01 402 aa19.36■□□□□ 0.69
CHMP1A-204ENST00000547687 TDO2P48775 406 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms