RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 UBE2Q1Q7Z7E8 422 aa11.24□□□□□ -0.61
AC055716.3-201ENST00000547533 ZNF280CQ8ND82 737 aa11.24□□□□□ -0.61
AC055716.3-201ENST00000547533 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
AC055716.3-201ENST00000547533 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
AC055716.3-201ENST00000547533 TMOD4Q9NZQ9 345 aa11.24□□□□□ -0.61
AC055716.3-201ENST00000547533 HERC5Q9UII4 1024 aaKnown RBP11.24□□□□□ -0.61
AC055716.3-201ENST00000547533 ATRNL1Q5VV63 1379 aa11.24□□□□□ -0.61
AC055716.3-201ENST00000547533 COL2A1P02458 1487 aaPredicted RBP11.24□□□□□ -0.61
AC055716.3-201ENST00000547533 USP17L5A8MUK1 530 aa11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 UQCRFS1P1P0C7P4 283 aa11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 ADORA1P30542 326 aa11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 MECOMQ03112 1051 aa11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 SPP2Q13103 211 aa11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 PDE3AQ14432 1141 aa11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 TRMT44Q8IYL2 757 aaKnown RBP11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 DHX36Q9H2U1 1008 aaKnown RBP11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 CWC22Q9HCG8 908 aaKnown RBP11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 PAK6Q9NQU5 681 aaPredicted RBP11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 LRP2BPQ9P2M1 347 aa11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 PA2G4Q9UQ80 394 aaKnown RBP11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 RFX7Q2KHR2 1363 aa11.23□□□□□ -0.61
AC055716.3-201ENST00000547533 G3BP1Q13283 466 aaKnown RBP eCLIP11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 ATF7IPQ6VMQ6 1270 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 SH3BP5LQ7L8J4 393 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 TEX11Q8IYF3 940 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 RPTORQ8N122 1335 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 CRACR2BQ8N4Y2 399 aaPredicted RBP11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 SLC17A8Q8NDX2 589 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 GTF3C2Q8WUA4 911 aaPredicted RBP11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 ARHGAP45Q92619 1136 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
AC055716.3-201ENST00000547533 MAST2Q6P0Q8 1798 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 IGSF3O75054 1194 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 ASNSP08243 561 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 CAP2P40123 477 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 HMGCS2P54868 508 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 TFCP2Q12800 502 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 TREML2Q5T2D2 321 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 SOCS4Q8WXH5 440 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 PAWRQ96IZ0 340 aaKnown RBP11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 DDX4Q9NQI0 724 aaKnown RBP11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 GINM1Q9NU53 330 aa11.21□□□□□ -0.61
AC055716.3-201ENST00000547533 ALPK3Q96L96 1907 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 C19orf81C9J6K1 198 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 GNAI2P04899 355 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 HLA-DOAP06340 250 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 CCDC158Q5M9N0 1113 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 NAA16Q6N069 864 aaPredicted RBP11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 C7orf61Q8IZ16 206 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 GPRC5AQ8NFJ5 357 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 NSUN4Q96CB9 384 aaKnown RBP11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 MEIS3Q99687 375 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 CRISPLD2Q9H0B8 497 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 C11orf49Q9H6J7 331 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 HMG20BQ9P0W2 317 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 FOCADQ5VW36 1801 aa11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 DDX60LQ5H9U9 1706 aaKnown RBP11.2□□□□□ -0.62
AC055716.3-201ENST00000547533 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 MAPK4P31152 587 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 RHBDL3P58872 404 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 OS9Q13438 667 aaPredicted RBP11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 MTX1Q13505 466 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 TTC39AQ5SRH9 613 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 GPR153Q6NV75 609 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 WDR18Q9BV38 432 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 PRO3102Q9H379 93 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 STAP2Q9UGK3 403 aa11.19□□□□□ -0.62
AC055716.3-201ENST00000547533 FAM196BA6NMK8 535 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 ZKSCAN1P17029 563 aaPredicted RBP11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 CYP2B6P20813 491 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 BMP8BP34820 402 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 BACE1P56817 501 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 CCNA1P78396 465 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 MTMR2Q13614 643 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 CCDC84Q86UT8 332 aaPredicted RBP11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 FOXP4Q8IVH2 680 aaPredicted RBP11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 MORF4L1Q9UBU8 362 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 CDK5RAP2Q96SN8 1893 aa11.18□□□□□ -0.62
AC055716.3-201ENST00000547533 MYH1P12882 1939 aa11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 DLL1O00548 723 aa11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 XRCC5P13010 732 aaKnown RBP11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 HOXA7P31268 230 aaPredicted RBP11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 RGS2P41220 211 aa11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 SH3RF3Q8TEJ3 882 aaPredicted RBP11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 AATFQ9NY61 560 aaKnown RBP eCLIP11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
AC055716.3-201ENST00000547533 RARSP54136 660 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms